EnhancerDB
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  3. vista20426[chr15:67440675-67441024]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20426[chr15:67440675-67441024]
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Tissue distribution of vista20426
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Transcription factor that possibly regulate vista20426[chr15:67440675-67441024]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 67440523 67441019 GATA3 UCSC Txn Factor no Conserved 108149749
chr15 67440591 67440990 EP300 UCSC Txn Factor no Conserved 108149756
chr15 67440595 67440994 TCF12 UCSC Txn Factor no Conserved 108149758
chr15 67440650 67440990 RFX5 UCSC Txn Factor no Conserved 108149764
chr15 67440687 67440942 FOSL2 UCSC Txn Factor no Conserved 108149768
chr15 67440694 67440863 CEBPB UCSC Txn Factor no Conserved 108149773
chr15 67440727 67440852 FOXA1 UCSC Txn Factor no Conserved 108149778
chr15 67440684 67440690 MZF1 JASPAR yes 70546559
chr15 67440688 67440700 GLI2 JASPAR yes 70546560
chr15 67440753 67440762 SRY JASPAR yes 70546561
chr15 67440753 67440773 TBX19 JASPAR yes 70546562
chr15 67440755 67440758 MYB TRANSFAC yes 70546563
chr15 67440755 67440771 T JASPAR yes 70546564
chr15 67440759 67440771 FOXI1 JASPAR yes 70546565
chr15 67440762 67440766 YY1 TRANSFAC yes 70546566
chr15 67440775 67440785 HOXA13 JASPAR yes 70546567
chr15 67440775 67440785 HOXB13 JASPAR yes 70546568
chr15 67440775 67440786 HOXA10 JASPAR yes 70546569
chr15 67440776 67440785 CDX1 JASPAR yes 70546570
chr15 67440776 67440787 CDX2 JASPAR yes 70546571
chr15 67440794 67440798 YY1 TRANSFAC yes 70546572
chr15 67440812 67440827 RFX5 JASPAR yes 70546573
chr15 67440827 67440842 PRDM1 JASPAR yes 70546574
chr15 67440854 67440858 LFA1 TRANSFAC yes 70546575
chr15 67440860 67440873 ELF1 JASPAR yes 70546576
chr15 67440860 67440874 SPI1 JASPAR yes 70546577
chr15 67440860 67440874 SPIC JASPAR yes 70546578
chr15 67440864 67440876 PBX1 JASPAR yes 70546579
chr15 67440878 67440882 YY1 TRANSFAC yes 70546580
chr15 67440883 67440894 FLI1 JASPAR yes 70546581
chr15 67440893 67440903 ETV6 JASPAR yes 70546582
chr15 67440918 67440921 MYB TRANSFAC yes 70546583
chr15 67440922 67440937 SCRT1 JASPAR yes 70546584
chr15 67440923 67440933 ID4 JASPAR yes 70546585
chr15 67440923 67440933 TCF3 JASPAR yes 70546586
chr15 67440923 67440933 TCF4 JASPAR yes 70546587
chr15 67440924 67440933 SNAI2 JASPAR yes 70546588
chr15 67440924 67440937 SCRT2 JASPAR yes 70546589
chr15 67440925 67440930 USF2 TRANSFAC yes 70546590
chr15 67440933 67440941 MEIS2 JASPAR yes 70546591
chr15 67440933 67440941 MEIS3 JASPAR yes 70546592
chr15 67440934 67440938 NFE TRANSFAC yes 70546593
chr15 67440946 67440961 MEF2C JASPAR yes 70546594
chr15 67440952 67440962 HOXD13 JASPAR yes 70546595
chr15 67440952 67440963 HOXA10 JASPAR yes 70546596
chr15 67440953 67440963 ALX3 JASPAR yes 70546597
chr15 67440953 67440963 GSX2 JASPAR yes 70546598
chr15 67440953 67440963 MNX1 JASPAR yes 70546599
chr15 67440954 67440962 BARX1 JASPAR yes 70546600
chr15 67440954 67440962 BSX JASPAR yes 70546601
chr15 67440954 67440962 ISL2 JASPAR yes 70546602
chr15 67440954 67440962 LMX1B JASPAR yes 70546603
chr15 67440954 67440962 MSX1 JASPAR yes 70546604
chr15 67440954 67440962 MSX2 JASPAR yes 70546605
chr15 67440971 67440983 NHLH1 JASPAR yes 70546606
chr15 67440971 67440989 NFYA JASPAR yes 70546607
chr15 67440972 67440982 MSC JASPAR yes 70546608
chr15 67440972 67440982 TFAP4 JASPAR yes 70546609
chr15 67440990 67441006 SOX4 JASPAR yes 70546610
chr15 67440993 67440997 YY1 TRANSFAC yes 70546611
SNP sites on vista20426[chr15:67440675-67441024]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 67440764 rs530683717 A T
CEBPB EP300 FOSL2 FOXA1 FOXI1 GATA3 RFX5 T TBX19 TCF12 YY1
4044413
chr15 67440777 rs2414944 G A
CDX1 CDX2 CEBPB EP300 FOSL2 FOXA1 GATA3 HOXA10 HOXA13 HOXB13 RFX5 TCF12
4044414
chr15 67440854 rs538839592 T G
CEBPB EP300 FOSL2 GATA3 LFA1 RFX5 TCF12
4044415
Genes possibly regulated by vista20426[chr15:67440675-67441024]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 67356101 67487533 + SMAD3 ENSG00000166949.11 67356101 0.69 1.0 14051 15426
chr15 67435072 67439277 - RP11-342M21.2 ENSG00000259202.1 67439277 1.0 1.0 14052 98602
Expression level of Genes
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miRNAs possibly regulated by vista20426[chr15:67440675-67441024]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results