EnhancerDB
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  3. vista20460[chr15:68588456-68588855]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20460[chr15:68588456-68588855]
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Tissue distribution of vista20460
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Transcription factor that possibly regulate vista20460[chr15:68588456-68588855]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 68588456 68588477 IRF1 JASPAR yes 70548159
chr15 68588460 68588472 IRF1 JASPAR yes 70548160
chr15 68588473 68588485 POU2F1 JASPAR yes 70548161
chr15 68588473 68588486 POU3F3 JASPAR yes 70548162
chr15 68588473 68588487 POU1F1 JASPAR yes 70548163
chr15 68588474 68588486 POU3F1 JASPAR yes 70548164
chr15 68588474 68588486 POU3F2 JASPAR yes 70548165
chr15 68588474 68588487 POU2F2 JASPAR yes 70548166
chr15 68588475 68588484 POU3F4 JASPAR yes 70548167
chr15 68588475 68588484 POU5F1B JASPAR yes 70548168
chr15 68588476 68588483 POU2F1 TRANSFAC yes 70548169
chr15 68588476 68588483 POU2F2 TRANSFAC yes 70548170
chr15 68588483 68588497 RXRB JASPAR yes 70548171
chr15 68588483 68588497 RXRG JASPAR yes 70548172
chr15 68588483 68588498 NR2C2 JASPAR yes 70548173
chr15 68588510 68588524 GATA2 JASPAR yes 70548174
chr15 68588511 68588516 GATA1 TRANSFAC yes 70548175
chr15 68588514 68588522 GATA3 JASPAR yes 70548176
chr15 68588514 68588522 GATA5 JASPAR yes 70548177
chr15 68588518 68588531 POU2F2 JASPAR yes 70548178
chr15 68588543 68588558 PRDM1 JASPAR yes 70548179
chr15 68588543 68588558 STAT2 JASPAR yes 70548180
chr15 68588544 68588548 YY1 TRANSFAC yes 70548181
chr15 68588544 68588558 STAT1 JASPAR yes 70548182
chr15 68588545 68588555 NFATC3 JASPAR yes 70548183
chr15 68588546 68588553 NFATC2 JASPAR yes 70548184
chr15 68588551 68588555 YY1 TRANSFAC yes 70548185
chr15 68588559 68588567 FOXL1 JASPAR yes 70548186
chr15 68588567 68588583 RFX2 JASPAR yes 70548187
chr15 68588587 68588596 VENTX JASPAR yes 70548188
chr15 68588587 68588597 GBX2 JASPAR yes 70548189
chr15 68588587 68588597 GSX2 JASPAR yes 70548190
chr15 68588587 68588597 MNX1 JASPAR yes 70548191
chr15 68588587 68588597 RAX JASPAR yes 70548192
chr15 68588588 68588596 BARX1 JASPAR yes 70548193
chr15 68588588 68588596 BSX JASPAR yes 70548194
chr15 68588588 68588596 ISL2 JASPAR yes 70548195
chr15 68588588 68588596 LMX1B JASPAR yes 70548196
chr15 68588588 68588596 MSX1 JASPAR yes 70548197
chr15 68588588 68588596 MSX2 JASPAR yes 70548198
chr15 68588600 68588612 PBX1 JASPAR yes 70548199
chr15 68588608 68588613 MYB TRANSFAC yes 70548200
chr15 68588618 68588622 YY1 TRANSFAC yes 70548201
chr15 68588621 68588629 LBX1 JASPAR yes 70548202
chr15 68588622 68588625 MYB TRANSFAC yes 70548203
chr15 68588622 68588633 PROP1 JASPAR yes 70548204
chr15 68588629 68588639 HOXB13 JASPAR yes 70548205
chr15 68588629 68588639 HOXD13 JASPAR yes 70548206
chr15 68588629 68588640 HOXA10 JASPAR yes 70548207
chr15 68588646 68588667 IRF1 JASPAR yes 70548208
chr15 68588649 68588663 STAT1 JASPAR yes 70548209
chr15 68588650 68588662 IRF1 JASPAR yes 70548210
chr15 68588650 68588664 IRF7 JASPAR yes 70548211
chr15 68588650 68588664 IRF8 JASPAR yes 70548212
chr15 68588650 68588665 IRF9 JASPAR yes 70548213
chr15 68588665 68588669 YY1 TRANSFAC yes 70548214
chr15 68588695 68588702 NKX3-1 JASPAR yes 70548215
chr15 68588703 68588710 NKX3-1 JASPAR yes 70548216
chr15 68588709 68588727 NR3C1 JASPAR yes 70548217
chr15 68588763 68588770 MEIS1 JASPAR yes 70548218
chr15 68588763 68588771 MEIS2 JASPAR yes 70548219
chr15 68588804 68588815 FOXB1 JASPAR yes 70548220
chr15 68588808 68588815 JUN TRANSFAC yes 70548221
chr15 68588814 68588827 DUXA JASPAR yes 70548222
chr15 68588815 68588826 DUX4 JASPAR yes 70548223
chr15 68588817 68588832 HNF1A JASPAR yes 70548224
chr15 68588820 68588830 PAX3 JASPAR yes 70548225
chr15 68588820 68588830 PAX7 JASPAR yes 70548226
chr15 68588822 68588832 BARHL2 JASPAR yes 70548227
chr15 68588824 68588828 YY1 TRANSFAC yes 70548228
chr15 68588835 68588841 TCF4 TRANSFAC yes 70548229
chr15 68588839 68588850 TBX20 JASPAR yes 70548230
SNP sites on vista20460[chr15:68588456-68588855]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 68588537 rs368055837 ATCTT A no 4050276
chr15 68588569 rs60705177 G A
RFX2
4050277
chr15 68588659 rs139084362 T C
IRF1 IRF7 IRF8 IRF9 STAT1
4050278
chr15 68588682 rs149621885 G T no 4050279
chr15 68588776 rs144335787 A G no 4050280
chr15 68588807 rs543001120 A G
FOXB1
4050281
Genes possibly regulated by vista20460[chr15:68588456-68588855]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 68483043 68498417 - CALML4 ENSG00000129007.10 68498417 0.83 0.99 14059 9961
chr15 68486139 68522056 - RP11-315D16.2 ENSG00000260007.1 68522056 0.95 0.86 14060 33600
chr15 68499330 68549549 - CLN6 ENSG00000128973.7 68549549 0.72 0.99 14061 61093
chr15 68570141 68588203 + FEM1B ENSG00000169018.5 68570141 0.61 0.99 14062 81685
Expression level of Genes
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miRNAs possibly regulated by vista20460[chr15:68588456-68588855]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results