EnhancerDB
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  3. vista20461[chr15:68589122-68589626]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20461[chr15:68589122-68589626]
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Tissue distribution of vista20461
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Transcription factor that possibly regulate vista20461[chr15:68589122-68589626]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 68589138 68589142 NFE TRANSFAC yes 70548231
chr15 68589154 68589175 IRF1 JASPAR yes 70548232
chr15 68589156 68589171 PRDM1 JASPAR yes 70548233
chr15 68589156 68589171 STAT2 JASPAR yes 70548234
chr15 68589157 68589178 ZNF263 JASPAR yes 70548235
chr15 68589159 68589174 FOXP1 JASPAR yes 70548236
chr15 68589160 68589175 FOXP1 JASPAR yes 70548237
chr15 68589184 68589188 YY1 TRANSFAC yes 70548238
chr15 68589199 68589209 HOXD13 JASPAR yes 70548239
chr15 68589199 68589210 HOXA10 JASPAR yes 70548240
chr15 68589200 68589209 CDX1 JASPAR yes 70548241
chr15 68589200 68589211 CDX2 JASPAR yes 70548242
chr15 68589208 68589229 ZNF263 JASPAR yes 70548243
chr15 68589211 68589232 ZNF263 JASPAR yes 70548244
chr15 68589214 68589235 ZNF263 JASPAR yes 70548245
chr15 68589216 68589237 IRF1 JASPAR yes 70548246
chr15 68589217 68589238 ZNF263 JASPAR yes 70548247
chr15 68589218 68589233 PRDM1 JASPAR yes 70548248
chr15 68589219 68589240 ZNF263 JASPAR yes 70548249
chr15 68589220 68589241 ZNF263 JASPAR yes 70548250
chr15 68589245 68589258 POU3F3 JASPAR yes 70548251
chr15 68589247 68589259 FOXC2 JASPAR yes 70548252
chr15 68589247 68589261 ONECUT2 JASPAR yes 70548253
chr15 68589247 68589261 ONECUT3 JASPAR yes 70548254
chr15 68589248 68589259 FOXB1 JASPAR yes 70548255
chr15 68589248 68589259 FOXC1 JASPAR yes 70548256
chr15 68589249 68589260 FOXH1 JASPAR yes 70548257
chr15 68589254 68589269 STAT1 JASPAR yes 70548258
chr15 68589256 68589267 STAT1 JASPAR yes 70548259
chr15 68589261 68589265 TEAD2 TRANSFAC yes 70548260
chr15 68589262 68589282 RREB1 JASPAR yes 70548261
chr15 68589265 68589277 FOXI1 JASPAR yes 70548262
chr15 68589268 68589280 IRF1 JASPAR yes 70548263
chr15 68589268 68589288 RREB1 JASPAR yes 70548264
chr15 68589269 68589289 RREB1 JASPAR yes 70548265
chr15 68589269 68589290 IRF1 JASPAR yes 70548266
chr15 68589272 68589292 RREB1 JASPAR yes 70548267
chr15 68589273 68589293 RREB1 JASPAR yes 70548268
chr15 68589276 68589282 TCF4 TRANSFAC yes 70548269
chr15 68589276 68589288 FOXI1 JASPAR yes 70548270
chr15 68589276 68589291 FOXP1 JASPAR yes 70548271
chr15 68589279 68589294 FOXA1 JASPAR yes 70548272
chr15 68589280 68589292 FOXI1 JASPAR yes 70548273
chr15 68589280 68589295 FOXP1 JASPAR yes 70548274
chr15 68589281 68589293 FOXC2 JASPAR yes 70548275
chr15 68589283 68589294 FOXA1 JASPAR yes 70548276
chr15 68589284 68589299 FOXP1 JASPAR yes 70548277
chr15 68589311 68589315 NFE TRANSFAC yes 70548278
chr15 68589338 68589344 YY1 JASPAR yes 70548279
chr15 68589351 68589368 ESR1 JASPAR yes 70548280
chr15 68589352 68589356 NFE TRANSFAC yes 70548281
chr15 68589354 68589369 LEF1 JASPAR yes 70548282
chr15 68589363 68589373 GABPA JASPAR yes 70548283
chr15 68589363 68589376 ELF1 JASPAR yes 70548284
chr15 68589365 68589371 ETS1 JASPAR yes 70548285
chr15 68589365 68589371 SPI1 JASPAR yes 70548286
chr15 68589376 68589394 RARA JASPAR yes 70548287
chr15 68589386 68589396 SREBF1 JASPAR yes 70548288
chr15 68589418 68589438 TP63 JASPAR yes 70548289
chr15 68589424 68589440 ZNF143 JASPAR yes 70548290
chr15 68589429 68589439 SP1 JASPAR yes 70548291
chr15 68589432 68589441 HIC2 JASPAR yes 70548292
chr15 68589444 68589459 FOXP1 JASPAR yes 70548293
chr15 68589448 68589463 MEF2C JASPAR yes 70548294
chr15 68589451 68589455 YY1 TRANSFAC yes 70548295
chr15 68589459 68589463 YY1 TRANSFAC yes 70548296
chr15 68589473 68589487 TLX1 JASPAR yes 70548297
chr15 68589481 68589497 ZNF143 JASPAR yes 70548298
chr15 68589526 68589537 E2F6 JASPAR yes 70548299
chr15 68589529 68589537 TBX15 JASPAR yes 70548300
chr15 68589557 68589570 ZBTB18 JASPAR yes 70548301
chr15 68589558 68589570 PKNOX2 JASPAR yes 70548302
chr15 68589558 68589570 TGIF1 JASPAR yes 70548303
chr15 68589566 68589577 FOSL2 JASPAR yes 70548304
chr15 68589574 68589582 TBX5 JASPAR yes 70548305
chr15 68589574 68589583 ZEB1 JASPAR yes 70548306
chr15 68589574 68589587 ZBTB18 JASPAR yes 70548307
chr15 68589575 68589585 ID4 JASPAR yes 70548308
chr15 68589575 68589585 TCF3 JASPAR yes 70548309
chr15 68589575 68589585 TCF4 JASPAR yes 70548310
chr15 68589577 68589582 USF2 TRANSFAC yes 70548311
chr15 68589595 68589599 YY1 TRANSFAC yes 70548312
chr15 68589595 68589606 CEBPB JASPAR yes 70548313
chr15 68589603 68589607 YY1 TRANSFAC yes 70548314
chr15 68589614 68589623 NKX2-8 JASPAR yes 70548315
chr15 68589614 68589624 NKX2-3 JASPAR yes 70548316
chr15 68589615 68589623 ISL2 JASPAR yes 70548317
chr15 68589615 68589624 NKX3-2 JASPAR yes 70548318
chr15 68589620 68589625 TFAP2A TRANSFAC yes 70548319
SNP sites on vista20461[chr15:68589122-68589626]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 68589160 rs534523391 CT C
FOXP1 IRF1 PRDM1 STAT2 ZNF263
4050291
chr15 68589160 rs60105898 CT C
FOXP1 IRF1 PRDM1 STAT2 ZNF263
4050292
chr15 68589173 rs530956331 T C
FOXP1 IRF1 ZNF263
4050293
chr15 68589277 rs369016950 TTTTG T
FOXI1 FOXP1 IRF1 RREB1 TCF4
4050294
chr15 68589277 rs376793315 TTTTG T
FOXI1 FOXP1 IRF1 RREB1 TCF4
4050295
chr15 68589371 rs10444805 G A
ELF1 ETS1 GABPA SPI1
4050296
chr15 68589374 rs79349838 C T
ELF1
4050297
chr15 68589469 rs377011407 T A no 4050298
chr15 68589501 rs143912428 G A no 4050299
chr15 68589601 rs542480094 CTTCA C
CEBPB
4050300
Genes possibly regulated by vista20461[chr15:68589122-68589626]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 68483043 68498417 - CALML4 ENSG00000129007.10 68498417 0.83 0.99 14059 9295
chr15 68486139 68522056 - RP11-315D16.2 ENSG00000260007.1 68522056 0.95 0.86 14060 32934
chr15 68499330 68549549 - CLN6 ENSG00000128973.7 68549549 0.72 0.99 14061 60427
chr15 68570141 68588203 + FEM1B ENSG00000169018.5 68570141 0.61 0.99 14062 81019
Expression level of Genes
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miRNAs possibly regulated by vista20461[chr15:68589122-68589626]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results