EnhancerDB
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  3. vista20474[chr15:68852038-68852173]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20474[chr15:68852038-68852173]
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Tissue distribution of vista20474
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Transcription factor that possibly regulate vista20474[chr15:68852038-68852173]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 68851886 68852683 CTCF UCSC Txn Factor no Conserved 108151262
chr15 68851886 68852683 CTCF UCSC Txn Factor no Conserved 108151263
chr15 68851921 68852357 MAX UCSC Txn Factor no Conserved 108151267
chr15 68851941 68852674 ZNF263 UCSC Txn Factor no Conserved 108151274
chr15 68851941 68852674 ZNF263 UCSC Txn Factor no Conserved 108151275
chr15 68851983 68852272 SMC3 UCSC Txn Factor no Conserved 108151290
chr15 68851990 68852281 RAD21 UCSC Txn Factor no Conserved 108151293
chr15 68852029 68852050 REST JASPAR yes 24295067
chr15 68852029 68852050 REST JASPAR yes 70548863
chr15 68852030 68852049 REST JASPAR yes 24295068
chr15 68852030 68852049 REST JASPAR yes 70548864
chr15 68852038 68852051 NFKB2 JASPAR yes 24295069
chr15 68852038 68852051 NFKB2 JASPAR yes 70548865
chr15 68852044 68852058 EBF1 JASPAR yes 24295070
chr15 68852044 68852058 EBF1 JASPAR yes 70548866
chr15 68852046 68852057 EBF1 JASPAR yes 24295071
chr15 68852046 68852057 EBF1 JASPAR yes 70548867
chr15 68852057 68852061 NFE TRANSFAC yes 24295072
chr15 68852057 68852061 NFE TRANSFAC yes 70548868
chr15 68852088 68852098 MNT JASPAR yes 24295073
chr15 68852088 68852098 MNT JASPAR yes 70548869
chr15 68852089 68852096 USF1 JASPAR yes 24295074
chr15 68852089 68852096 USF1 JASPAR yes 70548870
chr15 68852090 68852095 MYC TRANSFAC yes 24295075
chr15 68852090 68852095 USF1 TRANSFAC yes 24295076
chr15 68852090 68852095 USF2 TRANSFAC yes 24295077
chr15 68852090 68852095 MYC TRANSFAC yes 70548871
chr15 68852090 68852095 USF1 TRANSFAC yes 70548872
chr15 68852090 68852095 USF2 TRANSFAC yes 70548873
chr15 68852108 68852117 HIC2 JASPAR yes 24295078
chr15 68852108 68852117 HIC2 JASPAR yes 70548874
chr15 68852109 68852128 CTCF JASPAR yes 24295079
chr15 68852109 68852128 CTCF JASPAR yes 70548875
chr15 68852110 68852125 ZIC3 JASPAR yes 24295080
chr15 68852110 68852125 ZIC4 JASPAR yes 24295081
chr15 68852110 68852125 ZIC3 JASPAR yes 70548876
chr15 68852110 68852125 ZIC4 JASPAR yes 70548877
chr15 68852111 68852125 ZIC1 JASPAR yes 24295082
chr15 68852111 68852125 ZIC1 JASPAR yes 70548878
chr15 68852125 68852136 GCM1 JASPAR yes 24295083
chr15 68852125 68852136 GCM1 JASPAR yes 70548879
chr15 68852126 68852136 GCM2 JASPAR yes 24295084
chr15 68852126 68852136 GCM2 JASPAR yes 70548880
chr15 68852135 68852143 EHF JASPAR yes 24295085
chr15 68852135 68852143 EHF JASPAR yes 70548881
chr15 68852171 68852183 E2F8 JASPAR yes 24295086
chr15 68852171 68852183 E2F8 JASPAR yes 70548882
SNP sites on vista20474[chr15:68852038-68852173]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 68852054 rs147535460 G C
CTCF EBF1 MAX RAD21 SMC3 ZNF263
4052746
chr15 68852063 rs117486863 G C
CTCF MAX RAD21 SMC3 ZNF263
4052747
chr15 68852105 rs114956180 C T
CTCF MAX RAD21 SMC3 ZNF263
4052748
chr15 68852127 rs140136922 G A
CTCF GCM1 GCM2 MAX RAD21 SMC3 ZNF263
4052749
Genes possibly regulated by vista20474[chr15:68852038-68852173]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 68871308 69020145 + CORO2B ENSG00000103647.8 68871308 0.82 1.0 14064 80865
Expression level of Genes
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miRNAs possibly regulated by vista20474[chr15:68852038-68852173]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results