EnhancerDB
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  3. vista20478[chr15:68894151-68894553]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20478[chr15:68894151-68894553]
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Tissue distribution of vista20478
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Transcription factor that possibly regulate vista20478[chr15:68894151-68894553]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 68894153 68894164 CDX2 JASPAR yes 24299222
chr15 68894153 68894164 CDX2 JASPAR yes 70549001
chr15 68894154 68894165 HOXA10 JASPAR yes 24299223
chr15 68894154 68894165 HOXA10 JASPAR yes 70549002
chr15 68894155 68894164 CDX1 JASPAR yes 24299224
chr15 68894155 68894164 CDX1 JASPAR yes 70549003
chr15 68894155 68894165 HOXA13 JASPAR yes 24299225
chr15 68894155 68894165 HOXB13 JASPAR yes 24299226
chr15 68894155 68894165 HOXD13 JASPAR yes 24299227
chr15 68894155 68894165 HOXA13 JASPAR yes 70549004
chr15 68894155 68894165 HOXB13 JASPAR yes 70549005
chr15 68894155 68894165 HOXD13 JASPAR yes 70549006
chr15 68894164 68894169 USF2 TRANSFAC yes 24299228
chr15 68894164 68894169 USF2 TRANSFAC yes 70549007
chr15 68894167 68894178 FOSL2 JASPAR yes 24299229
chr15 68894167 68894178 FOSL2 JASPAR yes 70549008
chr15 68894173 68894177 YY1 TRANSFAC yes 24299230
chr15 68894173 68894177 YY1 TRANSFAC yes 70549009
chr15 68894177 68894181 TEAD2 TRANSFAC yes 24299231
chr15 68894177 68894181 TEAD2 TRANSFAC yes 70549010
chr15 68894177 68894182 TBP TRANSFAC yes 24299232
chr15 68894177 68894182 TBP TRANSFAC yes 70549011
chr15 68894181 68894196 STAT2 JASPAR yes 24299233
chr15 68894181 68894196 STAT2 JASPAR yes 70549012
chr15 68894188 68894202 ONECUT1 JASPAR yes 24299234
chr15 68894188 68894202 ONECUT2 JASPAR yes 24299235
chr15 68894188 68894202 ONECUT3 JASPAR yes 24299236
chr15 68894188 68894202 ONECUT1 JASPAR yes 70549013
chr15 68894188 68894202 ONECUT2 JASPAR yes 70549014
chr15 68894188 68894202 ONECUT3 JASPAR yes 70549015
chr15 68894189 68894199 PAX3 JASPAR yes 24299237
chr15 68894189 68894199 PAX7 JASPAR yes 24299238
chr15 68894189 68894199 PAX3 JASPAR yes 70549016
chr15 68894189 68894199 PAX7 JASPAR yes 70549017
chr15 68894194 68894199 H4TF1 TRANSFAC yes 24299239
chr15 68894194 68894199 H4TF1 TRANSFAC yes 70549018
chr15 68894216 68894227 NFKB1 JASPAR yes 24299240
chr15 68894216 68894227 NFKB1 JASPAR yes 70549019
chr15 68894217 68894222 ETS2 TRANSFAC yes 24299241
chr15 68894217 68894222 ETS2 TRANSFAC yes 70549020
chr15 68894217 68894227 RELA JASPAR yes 24299242
chr15 68894217 68894227 RELA JASPAR yes 70549021
chr15 68894237 68894248 NRL JASPAR yes 24299243
chr15 68894237 68894248 NRL JASPAR yes 70549022
chr15 68894249 68894255 TCF4 TRANSFAC yes 24299244
chr15 68894249 68894255 TCF4 TRANSFAC yes 70549023
chr15 68894254 68894263 NFIX JASPAR yes 24299245
chr15 68894254 68894263 NFIX JASPAR yes 70549024
chr15 68894255 68894261 NFIC JASPAR yes 24299246
chr15 68894255 68894261 NFIC JASPAR yes 70549025
chr15 68894270 68894281 EBF1 JASPAR yes 24299247
chr15 68894270 68894281 EBF1 JASPAR yes 70549026
chr15 68894280 68894300 ESR1 JASPAR yes 24299248
chr15 68894280 68894300 ESR1 JASPAR yes 70549027
chr15 68894283 68894301 ESR2 JASPAR yes 24299249
chr15 68894283 68894301 ESR2 JASPAR yes 70549028
chr15 68894284 68894301 NR3C1 JASPAR yes 24299250
chr15 68894284 68894301 NR3C2 JASPAR yes 24299251
chr15 68894284 68894301 NR3C1 JASPAR yes 70549029
chr15 68894284 68894301 NR3C2 JASPAR yes 70549030
chr15 68894284 68894302 ESR2 JASPAR yes 24299252
chr15 68894284 68894302 ESR2 JASPAR yes 70549031
chr15 68894286 68894301 AR JASPAR yes 24299253
chr15 68894286 68894301 AR JASPAR yes 70549032
chr15 68894299 68894311 YY1 JASPAR yes 24299254
chr15 68894299 68894311 YY1 JASPAR yes 70549033
chr15 68894307 68894313 ETS1 JASPAR yes 24299255
chr15 68894307 68894313 SPI1 JASPAR yes 24299256
chr15 68894307 68894313 ETS1 JASPAR yes 70549034
chr15 68894307 68894313 SPI1 JASPAR yes 70549035
chr15 68894318 68894332 TLX1 JASPAR yes 24299257
chr15 68894318 68894332 TLX1 JASPAR yes 70549036
chr15 68894339 68894344 ETS2 TRANSFAC yes 24299258
chr15 68894339 68894344 ETS2 TRANSFAC yes 70549037
chr15 68894341 68894362 IRF1 JASPAR yes 24299259
chr15 68894341 68894362 IRF1 JASPAR yes 70549038
chr15 68894344 68894365 IRF1 JASPAR yes 24299260
chr15 68894344 68894365 IRF1 JASPAR yes 70549039
chr15 68894346 68894361 FOXP1 JASPAR yes 24299261
chr15 68894346 68894361 FOXP1 JASPAR yes 70549040
chr15 68894347 68894362 FOXP1 JASPAR yes 24299262
chr15 68894347 68894362 FOXP1 JASPAR yes 70549041
chr15 68894348 68894363 FOXP1 JASPAR yes 24299263
chr15 68894348 68894363 FOXP1 JASPAR yes 70549042
chr15 68894349 68894364 FOXP1 JASPAR yes 24299264
chr15 68894349 68894364 FOXP1 JASPAR yes 70549043
chr15 68894350 68894365 FOXP1 JASPAR yes 24299265
chr15 68894350 68894365 FOXP1 JASPAR yes 70549044
chr15 68894351 68894366 FOXP1 JASPAR yes 24299266
chr15 68894351 68894366 FOXP1 JASPAR yes 70549045
chr15 68894352 68894367 FOXP1 JASPAR yes 24299267
chr15 68894352 68894367 FOXP1 JASPAR yes 70549046
chr15 68894353 68894368 FOXP1 JASPAR yes 24299268
chr15 68894353 68894368 FOXP1 JASPAR yes 70549047
chr15 68894355 68894370 MEF2C JASPAR yes 24299269
chr15 68894355 68894370 MEF2C JASPAR yes 70549048
chr15 68894375 68894384 PITX3 JASPAR yes 24299270
chr15 68894375 68894384 PITX3 JASPAR yes 70549049
chr15 68894375 68894385 GSC2 JASPAR yes 24299271
chr15 68894375 68894385 GSC JASPAR yes 24299272
chr15 68894375 68894385 GSC2 JASPAR yes 70549050
chr15 68894375 68894385 GSC JASPAR yes 70549051
chr15 68894376 68894384 OTX1 JASPAR yes 24299273
chr15 68894376 68894384 OTX2 JASPAR yes 24299274
chr15 68894376 68894384 RHOXF1 JASPAR yes 24299275
chr15 68894376 68894384 OTX1 JASPAR yes 70549052
chr15 68894376 68894384 OTX2 JASPAR yes 70549053
chr15 68894376 68894384 RHOXF1 JASPAR yes 70549054
chr15 68894385 68894396 EBF1 JASPAR yes 24299276
chr15 68894385 68894396 EBF1 JASPAR yes 70549055
chr15 68894398 68894411 TFAP2A JASPAR yes 24299277
chr15 68894398 68894411 TFAP2A JASPAR yes 70549056
chr15 68894409 68894419 EVX1 JASPAR yes 24299278
chr15 68894409 68894419 EVX2 JASPAR yes 24299279
chr15 68894409 68894419 EVX1 JASPAR yes 70549057
chr15 68894409 68894419 EVX2 JASPAR yes 70549058
chr15 68894442 68894446 NFE TRANSFAC yes 24299280
chr15 68894442 68894446 NFE TRANSFAC yes 70549059
chr15 68894449 68894458 NFIX JASPAR yes 24299281
chr15 68894449 68894458 NFIX JASPAR yes 70549060
chr15 68894450 68894456 NFIC JASPAR yes 24299282
chr15 68894450 68894456 NFIC JASPAR yes 70549061
chr15 68894454 68894459 MYC TRANSFAC yes 24299283
chr15 68894454 68894459 MYC TRANSFAC yes 70549062
chr15 68894495 68894501 YY1 JASPAR yes 24299284
chr15 68894495 68894501 YY1 JASPAR yes 70549063
chr15 68894500 68894509 PITX3 JASPAR yes 24299285
chr15 68894500 68894509 PITX3 JASPAR yes 70549064
chr15 68894500 68894510 GSC2 JASPAR yes 24299286
chr15 68894500 68894510 GSC JASPAR yes 24299287
chr15 68894500 68894510 GSC2 JASPAR yes 70549065
chr15 68894500 68894510 GSC JASPAR yes 70549066
chr15 68894501 68894509 RHOXF1 JASPAR yes 24299288
chr15 68894501 68894509 RHOXF1 JASPAR yes 70549067
chr15 68894530 68894534 H4TF2 TRANSFAC yes 24299289
chr15 68894530 68894534 H4TF2 TRANSFAC yes 70549068
chr15 68894534 68894543 NKX2-8 JASPAR yes 24299290
chr15 68894534 68894543 NKX2-8 JASPAR yes 70549069
chr15 68894534 68894544 NKX2-3 JASPAR yes 24299291
chr15 68894534 68894544 NKX2-3 JASPAR yes 70549070
chr15 68894545 68894555 ZNF740 JASPAR yes 24299292
chr15 68894545 68894555 ZNF740 JASPAR yes 70549071
chr15 68894552 68894563 NRL JASPAR yes 24299293
chr15 68894552 68894563 NRL JASPAR yes 70549072
chr15 68894552 68894567 MAFK JASPAR yes 24299294
chr15 68894552 68894567 MAFK JASPAR yes 70549073
SNP sites on vista20478[chr15:68894151-68894553]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 68894271 rs72746585 T G
EBF1
4053105
chr15 68894280 rs114200850 G T
EBF1 ESR1
4053106
chr15 68894281 rs186281260 G C
EBF1 ESR1
4053107
chr15 68894332 rs79502668 A G
TLX1
4053108
chr15 68894347 rs566789911 CT C
FOXP1 IRF1
4053109
Genes possibly regulated by vista20478[chr15:68894151-68894553]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 68871308 69020145 + CORO2B ENSG00000103647.8 68871308 0.82 1.0 14064 77157
Expression level of Genes
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miRNAs possibly regulated by vista20478[chr15:68894151-68894553]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results