EnhancerDB
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  3. vista20597[chr15:71371688-71372044]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20597[chr15:71371688-71372044]
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Tissue distribution of vista20597
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Transcription factor that possibly regulate vista20597[chr15:71371688-71372044]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 71371351 71371907 TCF7L2 UCSC Txn Factor no Conserved 108153922
chr15 71371688 71371703 FOXP1 JASPAR yes 24484253
chr15 71371688 71371703 FOXP1 JASPAR yes 70554654
chr15 71371689 71371704 FOXP1 JASPAR yes 24484254
chr15 71371689 71371704 FOXP1 JASPAR yes 70554655
chr15 71371689 71371710 IRF1 JASPAR yes 24484255
chr15 71371689 71371710 IRF1 JASPAR yes 70554656
chr15 71371690 71371705 FOXP1 JASPAR yes 24484256
chr15 71371690 71371705 FOXP1 JASPAR yes 70554657
chr15 71371690 71371711 IRF1 JASPAR yes 24484257
chr15 71371690 71371711 IRF1 JASPAR yes 70554658
chr15 71371691 71371706 FOXP1 JASPAR yes 24484258
chr15 71371691 71371706 FOXP1 JASPAR yes 70554659
chr15 71371691 71371712 IRF1 JASPAR yes 24484259
chr15 71371691 71371712 IRF1 JASPAR yes 70554660
chr15 71371692 71371707 FOXP1 JASPAR yes 24484260
chr15 71371692 71371707 FOXP1 JASPAR yes 70554661
chr15 71371692 71371713 IRF1 JASPAR yes 24484261
chr15 71371692 71371713 IRF1 JASPAR yes 70554662
chr15 71371693 71371708 FOXP1 JASPAR yes 24484262
chr15 71371693 71371708 FOXP1 JASPAR yes 70554663
chr15 71371693 71371714 IRF1 JASPAR yes 24484263
chr15 71371693 71371714 IRF1 JASPAR yes 70554664
chr15 71371694 71371709 FOXP1 JASPAR yes 24484264
chr15 71371694 71371709 FOXP1 JASPAR yes 70554665
chr15 71371694 71371715 IRF1 JASPAR yes 24484265
chr15 71371694 71371715 IRF1 JASPAR yes 70554666
chr15 71371695 71371710 FOXP1 JASPAR yes 24484266
chr15 71371695 71371710 FOXP1 JASPAR yes 70554667
chr15 71371697 71371712 FOXP1 JASPAR yes 24484267
chr15 71371697 71371712 FOXP1 JASPAR yes 70554668
chr15 71371699 71371714 FOXP1 JASPAR yes 24484268
chr15 71371699 71371714 FOXP1 JASPAR yes 70554669
chr15 71371700 71371721 IRF1 JASPAR yes 24484269
chr15 71371700 71371721 IRF1 JASPAR yes 70554670
chr15 71371702 71371713 FOXP2 JASPAR yes 24484270
chr15 71371702 71371713 FOXP2 JASPAR yes 70554671
chr15 71371704 71371718 SPI1 JASPAR yes 24484271
chr15 71371704 71371718 SPI1 JASPAR yes 70554672
chr15 71371709 71371721 PROX1 JASPAR yes 24484272
chr15 71371709 71371721 PROX1 JASPAR yes 70554673
chr15 71371734 71371745 EBF1 JASPAR yes 24484273
chr15 71371734 71371745 EBF1 JASPAR yes 70554674
chr15 71371743 71371758 SCRT1 JASPAR yes 24484274
chr15 71371743 71371758 SCRT1 JASPAR yes 70554675
chr15 71371753 71371757 YY1 TRANSFAC yes 24484275
chr15 71371753 71371757 YY1 TRANSFAC yes 70554676
chr15 71371766 71371771 MYC TRANSFAC yes 24484276
chr15 71371766 71371771 MYC TRANSFAC yes 70554677
chr15 71371829 71371840 HOXC12 JASPAR yes 24484277
chr15 71371829 71371840 HOXC13 JASPAR yes 24484278
chr15 71371829 71371840 HOXC12 JASPAR yes 70554678
chr15 71371829 71371840 HOXC13 JASPAR yes 70554679
chr15 71371844 71371858 ZIC1 JASPAR yes 24484279
chr15 71371844 71371858 ZIC1 JASPAR yes 70554680
chr15 71371844 71371859 ZIC3 JASPAR yes 24484280
chr15 71371844 71371859 ZIC4 JASPAR yes 24484281
chr15 71371844 71371859 ZIC3 JASPAR yes 70554681
chr15 71371844 71371859 ZIC4 JASPAR yes 70554682
chr15 71371872 71371877 SP1 TRANSFAC yes 24484282
chr15 71371872 71371877 SP1 TRANSFAC yes 70554683
chr15 71371873 71371883 REL JASPAR yes 24484283
chr15 71371873 71371883 REL JASPAR yes 70554684
chr15 71371873 71371884 NFKB1 JASPAR yes 24484284
chr15 71371873 71371884 NFKB1 JASPAR yes 70554685
chr15 71371877 71371888 STAT3 JASPAR yes 24484285
chr15 71371877 71371888 STAT3 JASPAR yes 70554686
chr15 71371894 71371899 GATA1 TRANSFAC yes 24484286
chr15 71371894 71371899 GATA1 TRANSFAC yes 70554687
chr15 71371901 71371915 GATA2 JASPAR yes 24484287
chr15 71371901 71371915 GATA2 JASPAR yes 70554688
chr15 71371903 71371909 GATA1 TRANSFAC yes 24484288
chr15 71371903 71371909 GATA1 TRANSFAC yes 70554689
chr15 71371906 71371913 NKX3-1 JASPAR yes 24484289
chr15 71371906 71371913 NKX3-1 JASPAR yes 70554690
chr15 71371917 71371923 LEF1 TRANSFAC yes 24484290
chr15 71371917 71371923 SOX10 JASPAR yes 24484291
chr15 71371917 71371923 LEF1 TRANSFAC yes 70554691
chr15 71371917 71371923 SOX10 JASPAR yes 70554692
chr15 71371924 71371935 DMRT3 JASPAR yes 24484292
chr15 71371924 71371935 DMRT3 JASPAR yes 70554693
chr15 71371928 71371931 MYB TRANSFAC yes 24484293
chr15 71371928 71371931 MYB TRANSFAC yes 70554694
chr15 71371948 71371954 NFIC JASPAR yes 24484294
chr15 71371948 71371954 NFIC JASPAR yes 70554695
chr15 71371995 71372001 MZF1 JASPAR yes 24484295
chr15 71371995 71372001 MZF1 JASPAR yes 70554696
chr15 71372024 71372045 IRF1 JASPAR yes 24484296
chr15 71372024 71372045 IRF1 JASPAR yes 70554697
chr15 71372026 71372041 FOXP1 JASPAR yes 24484297
chr15 71372026 71372041 FOXP1 JASPAR yes 70554698
chr15 71372028 71372040 IRF1 JASPAR yes 24484298
chr15 71372028 71372040 IRF1 JASPAR yes 70554699
SNP sites on vista20597[chr15:71371688-71372044]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 71371724 rs142163258 A T
TCF7L2
4072358
chr15 71371735 rs547142109 G C,T
EBF1 TCF7L2
4072359
chr15 71371775 rs374185297 T C
TCF7L2
4072360
chr15 71371874 rs549882067 G C
NFKB1 REL SP1 TCF7L2
4072361
chr15 71371921 rs554671355 T C
LEF1 SOX10
4072362
Genes possibly regulated by vista20597[chr15:71371688-71372044]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 71389291 72075722 + THSD4 ENSG00000187720.10 71389291 0.74 1.0 14077 82753
chr15 71402583 71407833 - CT62 ENSG00000225362.4 71407833 0.85 0.99 14078 64211
Expression level of Genes
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miRNAs possibly regulated by vista20597[chr15:71371688-71372044]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results