EnhancerDB
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  3. vista20600[chr15:71385768-71386181]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20600[chr15:71385768-71386181]
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Tissue distribution of vista20600
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Transcription factor that possibly regulate vista20600[chr15:71385768-71386181]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 71385766 71386006 RFX5 UCSC Txn Factor no Conserved 108153973
chr15 71385769 71385780 USF1 JASPAR yes 70554777
chr15 71385769 71385780 USF2 JASPAR yes 70554778
chr15 71385770 71385780 TFEB JASPAR yes 70554779
chr15 71385770 71385780 TFEC JASPAR yes 70554780
chr15 71385770 71385781 USF1 JASPAR yes 70554781
chr15 71385797 71385811 MTF1 JASPAR yes 70554782
chr15 71385823 71385842 RFX2 JASPAR yes 70554783
chr15 71385824 71385839 FOXP1 JASPAR yes 70554784
chr15 71385825 71385836 FOXP2 JASPAR yes 70554785
chr15 71385827 71385835 FOXO3 JASPAR yes 70554786
chr15 71385827 71385843 RFX2 JASPAR yes 70554787
chr15 71385827 71385843 RFX3 JASPAR yes 70554788
chr15 71385827 71385843 RFX4 JASPAR yes 70554789
chr15 71385843 71385851 EHF JASPAR yes 70554790
chr15 71385845 71385850 ETS2 TRANSFAC yes 70554791
chr15 71385848 71385854 TCF4 TRANSFAC yes 70554792
chr15 71385872 71385888 RFX3 JASPAR yes 70554793
chr15 71385872 71385888 RFX5 JASPAR yes 70554794
chr15 71385873 71385892 RFX2 JASPAR yes 70554795
chr15 71385885 71385890 SP1 TRANSFAC yes 70554796
chr15 71385890 71385906 NFYA JASPAR yes 70554797
chr15 71385895 71385899 H1TF2 TRANSFAC yes 70554798
chr15 71385895 71385899 NFE TRANSFAC yes 70554799
chr15 71385895 71385899 SRF TRANSFAC yes 70554800
chr15 71385900 71385910 ID4 JASPAR yes 70554801
chr15 71385900 71385910 TCF3 JASPAR yes 70554802
chr15 71385900 71385910 TCF4 JASPAR yes 70554803
chr15 71385901 71385910 SNAI2 JASPAR yes 70554804
chr15 71385902 71385907 USF2 TRANSFAC yes 70554805
chr15 71385905 71385922 NR3C2 JASPAR yes 70554806
chr15 71385907 71385922 AR JASPAR yes 70554807
chr15 71385917 71385922 ETS2 TRANSFAC yes 70554808
chr15 71385924 71385941 ZNF410 JASPAR yes 70554809
chr15 71385935 71385946 FOXB1 JASPAR yes 70554810
chr15 71385936 71385940 YY1 TRANSFAC yes 70554811
chr15 71385937 71385945 FEV JASPAR yes 70554812
chr15 71385939 71385944 ETS2 TRANSFAC yes 70554813
chr15 71385949 71385955 HiNF-A TRANSFAC yes 70554814
chr15 71385953 71385961 TBX5 JASPAR yes 70554815
chr15 71385953 71385962 ZEB1 JASPAR yes 70554816
chr15 71385953 71385966 ZBTB18 JASPAR yes 70554817
chr15 71385954 71385964 FIGLA JASPAR yes 70554818
chr15 71385954 71385964 ID4 JASPAR yes 70554819
chr15 71385954 71385964 TCF3 JASPAR yes 70554820
chr15 71385954 71385964 TCF4 JASPAR yes 70554821
chr15 71385956 71385961 USF2 TRANSFAC yes 70554822
chr15 71385963 71385974 PHOX2A JASPAR yes 70554823
chr15 71385963 71385974 PROP1 JASPAR yes 70554824
chr15 71385965 71385970 MYB TRANSFAC yes 70554825
chr15 71385971 71385986 HSF1 JASPAR yes 70554826
chr15 71385972 71385985 HSF2 JASPAR yes 70554827
chr15 71385982 71385993 STAT3 JASPAR yes 70554828
chr15 71385983 71385996 ZBTB18 JASPAR yes 70554829
chr15 71385999 71386006 SPIB JASPAR yes 70554830
chr15 71386011 71386025 MTF1 JASPAR yes 70554831
chr15 71386014 71386034 PPARG JASPAR yes 70554832
chr15 71386018 71386022 LFA1 TRANSFAC yes 70554833
chr15 71386033 71386037 YY1 TRANSFAC yes 70554834
chr15 71386034 71386044 NFATC3 JASPAR yes 70554835
chr15 71386035 71386042 NFATC2 JASPAR yes 70554836
chr15 71386040 71386055 RFX5 JASPAR yes 70554837
chr15 71386046 71386064 NR3C1 JASPAR yes 70554838
chr15 71386055 71386059 YY1 TRANSFAC yes 70554839
chr15 71386087 71386098 CDX2 JASPAR yes 70554840
chr15 71386088 71386099 HOXA10 JASPAR yes 70554841
chr15 71386089 71386098 CDX1 JASPAR yes 70554842
chr15 71386089 71386099 HOXA13 JASPAR yes 70554843
chr15 71386089 71386099 HOXB13 JASPAR yes 70554844
chr15 71386089 71386099 HOXD13 JASPAR yes 70554845
chr15 71386090 71386102 FOXI1 JASPAR yes 70554846
chr15 71386099 71386109 SREBF2 JASPAR yes 70554847
chr15 71386099 71386110 USF2 JASPAR yes 70554848
chr15 71386117 71386131 PLAG1 JASPAR yes 70554849
chr15 71386148 71386159 FOXB1 JASPAR yes 70554850
chr15 71386148 71386159 FOXC1 JASPAR yes 70554851
chr15 71386148 71386160 FOXC2 JASPAR yes 70554852
chr15 71386149 71386161 FOXI1 JASPAR yes 70554853
chr15 71386173 71386177 YY1 TRANSFAC yes 70554854
SNP sites on vista20600[chr15:71385768-71386181]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 71385780 rs182025436 T C
RFX5 TFEB TFEC USF1 USF2
4072447
chr15 71385803 rs187063322 G A,T
MTF1 RFX5
4072448
chr15 71385864 rs545451650 A G
RFX5
4072449
chr15 71385888 rs576142388 G C
RFX2 RFX3 RFX5 SP1
4072450
chr15 71385968 rs530986652 T C
MYB PHOX2A PROP1 RFX5
4072451
Genes possibly regulated by vista20600[chr15:71385768-71386181]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 71389291 72075722 + THSD4 ENSG00000187720.10 71389291 0.74 1.0 14077 96890
chr15 71402583 71407833 - CT62 ENSG00000225362.4 71407833 0.85 0.99 14078 78348
Expression level of Genes
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miRNAs possibly regulated by vista20600[chr15:71385768-71386181]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results