EnhancerDB
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  3. vista20729[chr15:75160479-75160721]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20729[chr15:75160479-75160721]
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Tissue distribution of vista20729
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Transcription factor that possibly regulate vista20729[chr15:75160479-75160721]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 75160492 75160503 FOXH1 JASPAR yes 24678068
chr15 75160492 75160503 FOXH1 JASPAR yes 70560888
chr15 75160506 75160527 IRF1 JASPAR yes 24678069
chr15 75160506 75160527 IRF1 JASPAR yes 70560889
chr15 75160508 75160523 STAT2 JASPAR yes 24678070
chr15 75160508 75160523 STAT2 JASPAR yes 70560890
chr15 75160510 75160524 IRF7 JASPAR yes 24678071
chr15 75160510 75160524 IRF7 JASPAR yes 70560891
chr15 75160510 75160525 IRF9 JASPAR yes 24678072
chr15 75160510 75160525 IRF9 JASPAR yes 70560892
chr15 75160515 75160526 FLI1 JASPAR yes 24678073
chr15 75160515 75160526 FLI1 JASPAR yes 70560893
chr15 75160522 75160533 FLI1 JASPAR yes 24678074
chr15 75160522 75160533 FLI1 JASPAR yes 70560894
chr15 75160538 75160543 SP1 TRANSFAC yes 24678075
chr15 75160538 75160543 SP1 TRANSFAC yes 70560895
chr15 75160541 75160545 LFA1 TRANSFAC yes 24678076
chr15 75160541 75160545 LFA1 TRANSFAC yes 70560896
chr15 75160570 75160573 MYB TRANSFAC yes 24678077
chr15 75160570 75160573 MYB TRANSFAC yes 70560897
chr15 75160582 75160592 MSC JASPAR yes 24678078
chr15 75160582 75160592 MSC JASPAR yes 70560898
chr15 75160594 75160607 ELF1 JASPAR yes 24678079
chr15 75160594 75160607 ELF1 JASPAR yes 70560899
chr15 75160596 75160607 ELF5 JASPAR yes 24678080
chr15 75160596 75160607 ELF5 JASPAR yes 70560900
chr15 75160597 75160608 FLI1 JASPAR yes 24678081
chr15 75160597 75160608 FLI1 JASPAR yes 70560901
chr15 75160598 75160606 EHF JASPAR yes 24678082
chr15 75160598 75160606 FEV JASPAR yes 24678083
chr15 75160598 75160606 EHF JASPAR yes 70560902
chr15 75160598 75160606 FEV JASPAR yes 70560903
chr15 75160599 75160606 SPI1 JASPAR yes 24678084
chr15 75160599 75160606 SPI1 JASPAR yes 70560904
chr15 75160624 75160639 RUNX2 JASPAR yes 24678085
chr15 75160624 75160639 RUNX2 JASPAR yes 70560905
chr15 75160625 75160628 MYB TRANSFAC yes 24678086
chr15 75160625 75160628 MYB TRANSFAC yes 70560906
chr15 75160636 75160641 ETS2 TRANSFAC yes 24678087
chr15 75160636 75160641 ETS2 TRANSFAC yes 70560907
chr15 75160640 75160653 NR2F1 JASPAR yes 24678088
chr15 75160640 75160653 NR2F1 JASPAR yes 70560908
chr15 75160643 75160654 CDX2 JASPAR yes 24678089
chr15 75160643 75160654 CDX2 JASPAR yes 70560909
chr15 75160644 75160648 ESR1 TRANSFAC yes 24678090
chr15 75160644 75160648 ESR1 TRANSFAC yes 70560910
chr15 75160644 75160655 HOXA10 JASPAR yes 24678091
chr15 75160644 75160655 HOXC11 JASPAR yes 24678092
chr15 75160644 75160655 HOXC12 JASPAR yes 24678093
chr15 75160644 75160655 HOXD12 JASPAR yes 24678094
chr15 75160644 75160655 HOXA10 JASPAR yes 70560911
chr15 75160644 75160655 HOXC11 JASPAR yes 70560912
chr15 75160644 75160655 HOXC12 JASPAR yes 70560913
chr15 75160644 75160655 HOXD12 JASPAR yes 70560914
chr15 75160645 75160654 CDX1 JASPAR yes 24678095
chr15 75160645 75160654 CDX1 JASPAR yes 70560915
chr15 75160645 75160655 HOXC10 JASPAR yes 24678096
chr15 75160645 75160655 HOXD11 JASPAR yes 24678097
chr15 75160645 75160655 HOXD13 JASPAR yes 24678098
chr15 75160645 75160655 HOXC10 JASPAR yes 70560916
chr15 75160645 75160655 HOXD11 JASPAR yes 70560917
chr15 75160645 75160655 HOXD13 JASPAR yes 70560918
chr15 75160652 75160662 MAX JASPAR yes 24678099
chr15 75160652 75160662 MAX JASPAR yes 70560919
chr15 75160654 75160665 NRF1 JASPAR yes 24678100
chr15 75160654 75160665 NRF1 JASPAR yes 70560920
chr15 75160658 75160667 HIC2 JASPAR yes 24678101
chr15 75160658 75160667 HIC2 JASPAR yes 70560921
chr15 75160683 75160692 NKX3-2 JASPAR yes 24678102
chr15 75160683 75160692 NKX3-2 JASPAR yes 70560922
chr15 75160684 75160692 ISL2 JASPAR yes 24678103
chr15 75160684 75160692 ISL2 JASPAR yes 70560923
chr15 75160702 75160716 SPI1 JASPAR yes 24678104
chr15 75160702 75160716 SPIC JASPAR yes 24678105
chr15 75160702 75160716 SPI1 JASPAR yes 70560924
chr15 75160702 75160716 SPIC JASPAR yes 70560925
chr15 75160703 75160716 ELF1 JASPAR yes 24678106
chr15 75160703 75160716 ELF1 JASPAR yes 70560926
chr15 75160705 75160716 ELF5 JASPAR yes 24678107
chr15 75160705 75160716 ELF5 JASPAR yes 70560927
chr15 75160707 75160715 EHF JASPAR yes 24678108
chr15 75160707 75160715 EHF JASPAR yes 70560928
chr15 75160708 75160715 SPI1 JASPAR yes 24678109
chr15 75160708 75160715 SPI1 JASPAR yes 70560929
chr15 75160717 75160727 BARHL2 JASPAR yes 24678110
chr15 75160717 75160727 BARHL2 JASPAR yes 70560930
SNP sites on vista20729[chr15:75160479-75160721]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 75160588 rs116291557 C A,T
MSC
4092444
chr15 75160693 rs115164067 T A,C no 4092445
chr15 75160700 rs76386049 C G no 4092446
Genes possibly regulated by vista20729[chr15:75160479-75160721]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 75074398 75095539 + CSK ENSG00000103653.12 75074398 0.81 1.0 14117 13919
chr15 75105057 75118099 + LMAN1L ENSG00000140506.12 75105057 0.99 0.98 14118 44578
chr15 75118888 75124141 + CPLX3 ENSG00000213578.4 75118888 0.99 0.98 14119 58409
chr15 75128457 75135687 - ULK3 ENSG00000140474.8 75135687 0.69 1.0 14120 75208
chr15 75136071 75165706 - SCAMP2 ENSG00000140497.12 75165706 0.58 1.0 14121 95015
chr15 75182346 75191798 + MPI ENSG00000178802.13 75182346 0.62 1.0 14122 78375
chr15 75192328 75199462 - FAM219B ENSG00000178761.10 75199462 0.54 1.0 14123 61259
chr15 75212132 75230509 - COX5A ENSG00000178741.7 75230509 0.88 1.0 14124 30212
chr15 75246757 75249805 - RPP25 ENSG00000178718.5 75249805 0.8 0.99 14125 10916
chr15 75249560 75313837 + SCAMP5 ENSG00000198794.7 75249560 0.87 0.99 14126 11161
Expression level of Genes
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miRNAs possibly regulated by vista20729[chr15:75160479-75160721]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr15 75132983 75133006 - hsa-miR-6882-3p MIMAT0027665 75135490 0.0012360939431396785 0.852926 0.0 565
Expression level of miRNAs
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