EnhancerDB
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  3. vista20757[chr15:75460054-75460405]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista20757[chr15:75460054-75460405]
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Tissue distribution of vista20757
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Transcription factor that possibly regulate vista20757[chr15:75460054-75460405]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr15 75459958 75460103 TAL1 UCSC Txn Factor no Conserved 108157254
chr15 75460048 75460054 GATA3 JASPAR yes 24699186
chr15 75460048 75460054 GATA3 JASPAR yes 70562451
chr15 75460061 75460072 ESRRA JASPAR yes 24699187
chr15 75460061 75460072 ESRRA JASPAR yes 70562452
chr15 75460071 75460074 MYB TRANSFAC yes 24699188
chr15 75460071 75460074 MYB TRANSFAC yes 70562453
chr15 75460076 75460094 RARA JASPAR yes 24699189
chr15 75460076 75460094 RARA JASPAR yes 70562454
chr15 75460081 75460096 PRDM1 JASPAR yes 24699190
chr15 75460081 75460096 PRDM1 JASPAR yes 70562455
chr15 75460093 75460112 RFX2 JASPAR yes 24699191
chr15 75460093 75460112 RFX2 JASPAR yes 70562456
chr15 75460106 75460116 MSC JASPAR yes 24699192
chr15 75460106 75460116 TFAP4 JASPAR yes 24699193
chr15 75460106 75460116 MSC JASPAR yes 70562457
chr15 75460106 75460116 TFAP4 JASPAR yes 70562458
chr15 75460138 75460153 PRDM1 JASPAR yes 24699194
chr15 75460138 75460153 PRDM1 JASPAR yes 70562459
chr15 75460149 75460166 PAX1 JASPAR yes 24699195
chr15 75460149 75460166 PAX1 JASPAR yes 70562460
chr15 75460161 75460174 ZBTB18 JASPAR yes 24699196
chr15 75460161 75460174 ZBTB18 JASPAR yes 70562461
chr15 75460163 75460173 MSC JASPAR yes 24699197
chr15 75460163 75460173 MSC JASPAR yes 70562462
chr15 75460185 75460195 HOXA13 JASPAR yes 24699198
chr15 75460185 75460195 HOXB13 JASPAR yes 24699199
chr15 75460185 75460195 HOXD13 JASPAR yes 24699200
chr15 75460185 75460195 HOXA13 JASPAR yes 70562463
chr15 75460185 75460195 HOXB13 JASPAR yes 70562464
chr15 75460185 75460195 HOXD13 JASPAR yes 70562465
chr15 75460185 75460196 HOXA10 JASPAR yes 24699201
chr15 75460185 75460196 HOXA10 JASPAR yes 70562466
chr15 75460186 75460195 CDX1 JASPAR yes 24699202
chr15 75460186 75460195 CDX1 JASPAR yes 70562467
chr15 75460186 75460197 CDX2 JASPAR yes 24699203
chr15 75460186 75460197 CDX2 JASPAR yes 70562468
chr15 75460194 75460205 BATF JASPAR yes 24699204
chr15 75460194 75460205 BATF JASPAR yes 70562469
chr15 75460212 75460228 ZNF143 JASPAR yes 24699205
chr15 75460212 75460228 ZNF143 JASPAR yes 70562470
chr15 75460222 75460237 HNF4G JASPAR yes 24699206
chr15 75460222 75460237 HNF4G JASPAR yes 70562471
chr15 75460223 75460241 RARA JASPAR yes 24699207
chr15 75460223 75460241 RARA JASPAR yes 70562472
chr15 75460239 75460244 GATA2 JASPAR yes 24699208
chr15 75460239 75460244 GATA2 JASPAR yes 70562473
chr15 75460240 75460260 RREB1 JASPAR yes 24699209
chr15 75460240 75460260 RREB1 JASPAR yes 70562474
chr15 75460248 75460253 SP1 TRANSFAC yes 24699210
chr15 75460248 75460253 SP1 TRANSFAC yes 70562475
chr15 75460256 75460261 SP1 TRANSFAC yes 24699211
chr15 75460256 75460261 SP1 TRANSFAC yes 70562476
chr15 75460271 75460289 NFYA JASPAR yes 24699212
chr15 75460271 75460289 NFYA JASPAR yes 70562477
chr15 75460274 75460290 NFYA JASPAR yes 24699213
chr15 75460274 75460290 NFYA JASPAR yes 70562478
chr15 75460276 75460296 RREB1 JASPAR yes 24699214
chr15 75460276 75460296 RREB1 JASPAR yes 70562479
chr15 75460277 75460292 NFYB JASPAR yes 24699215
chr15 75460277 75460292 NFYB JASPAR yes 70562480
chr15 75460279 75460284 NFY TRANSFAC yes 24699216
chr15 75460279 75460284 NFY TRANSFAC yes 70562481
chr15 75460285 75460297 E2F8 JASPAR yes 24699217
chr15 75460285 75460297 E2F8 JASPAR yes 70562482
chr15 75460288 75460293 SP1 TRANSFAC yes 24699218
chr15 75460288 75460293 SP1 TRANSFAC yes 70562483
chr15 75460294 75460308 BATF3 JASPAR yes 24699219
chr15 75460294 75460308 BATF3 JASPAR yes 70562484
chr15 75460328 75460339 BATF JASPAR yes 24699220
chr15 75460328 75460339 BATF JASPAR yes 70562485
chr15 75460330 75460341 FOS JASPAR yes 24699221
chr15 75460330 75460341 FOSL1 JASPAR yes 24699222
chr15 75460330 75460341 JUND JASPAR yes 24699223
chr15 75460330 75460341 FOS JASPAR yes 70562486
chr15 75460330 75460341 FOSL1 JASPAR yes 70562487
chr15 75460330 75460341 JUND JASPAR yes 70562488
chr15 75460331 75460342 JUNB JASPAR yes 24699224
chr15 75460331 75460342 JUNB JASPAR yes 70562489
chr15 75460331 75460345 JUN JASPAR yes 24699225
chr15 75460331 75460345 JUN JASPAR yes 70562490
chr15 75460332 75460339 JUN TRANSFAC yes 24699226
chr15 75460332 75460339 JUN TRANSFAC yes 70562491
chr15 75460332 75460343 BATF JASPAR yes 24699227
chr15 75460332 75460343 BATF JASPAR yes 70562492
chr15 75460346 75460351 SP1 TRANSFAC yes 24699228
chr15 75460346 75460351 SP1 TRANSFAC yes 70562493
chr15 75460349 75460354 SP1 TRANSFAC yes 24699229
chr15 75460349 75460354 SP1 TRANSFAC yes 70562494
chr15 75460386 75460397 CEBPA JASPAR yes 24699230
chr15 75460386 75460397 CEBPA JASPAR yes 70562495
chr15 75460387 75460398 CEBPB JASPAR yes 24699231
chr15 75460387 75460398 CEBPB JASPAR yes 70562496
chr15 75460403 75460407 YY1 TRANSFAC yes 24699232
chr15 75460403 75460407 YY1 TRANSFAC yes 70562497
chr15 75460405 75460413 ISL2 JASPAR yes 24699233
chr15 75460405 75460413 ISL2 JASPAR yes 70562498
chr15 75460405 75460414 NKX3-2 JASPAR yes 24699234
chr15 75460405 75460414 NKX3-2 JASPAR yes 70562499
SNP sites on vista20757[chr15:75460054-75460405]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr15 75460064 rs554182969 T C
ESRRA TAL1
4094536
chr15 75460098 rs186774320 C T
RFX2 TAL1
4094537
chr15 75460182 rs562452971 C T no 4094538
chr15 75460223 rs544699065 A G
HNF4G RARA ZNF143
4094539
chr15 75460227 rs8026155 A G
HNF4G RARA ZNF143
4094540
chr15 75460382 rs8026352 A G no 4094541
Genes possibly regulated by vista20757[chr15:75460054-75460405]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr15 75487984 75504510 + C15orf39 ENSG00000167173.14 75487984 0.66 1.0 14128 72421
chr15 75550940 75562540 + GOLGA6C ENSG00000167195.7 75550940 0.94 0.94 14129 9465
Expression level of Genes
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miRNAs possibly regulated by vista20757[chr15:75460054-75460405]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results