EnhancerDB
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  3. vista21[chr1:1070745-1071151]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21[chr1:1070745-1071151]
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Tissue distribution of vista21
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Transcription factor that possibly regulate vista21[chr1:1070745-1071151]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 1070740 1070761 IRF1 JASPAR yes 26182832
chr1 1070740 1070761 IRF1 JASPAR yes 118213989
chr1 1070742 1070757 IRF9 JASPAR yes 26182833
chr1 1070742 1070757 IRF9 JASPAR yes 118213990
chr1 1070743 1070757 IRF7 JASPAR yes 26182834
chr1 1070743 1070757 IRF8 JASPAR yes 26182835
chr1 1070743 1070757 IRF7 JASPAR yes 118213991
chr1 1070743 1070757 IRF8 JASPAR yes 118213992
chr1 1070744 1070759 STAT2 JASPAR yes 26182836
chr1 1070744 1070759 STAT2 JASPAR yes 118213993
chr1 1070759 1070769 HOXB13 JASPAR yes 26182837
chr1 1070759 1070769 HOXB13 JASPAR yes 118213994
chr1 1070775 1070780 ETS2 TRANSFAC yes 26182838
chr1 1070775 1070780 ETS2 TRANSFAC yes 118213995
chr1 1070792 1070798 NFE2 TRANSFAC yes 26182839
chr1 1070792 1070798 NFE2 TRANSFAC yes 118213996
chr1 1070793 1070806 TFAP2A JASPAR yes 26182840
chr1 1070793 1070806 TFAP2B JASPAR yes 26182841
chr1 1070793 1070806 TFAP2C JASPAR yes 26182842
chr1 1070793 1070806 TFAP2A JASPAR yes 118213997
chr1 1070793 1070806 TFAP2B JASPAR yes 118213998
chr1 1070793 1070806 TFAP2C JASPAR yes 118213999
chr1 1070831 1070847 SOX8 JASPAR yes 26182843
chr1 1070831 1070847 SOX8 JASPAR yes 118214000
chr1 1070835 1070842 NKX3-1 JASPAR yes 26182844
chr1 1070835 1070842 NKX3-1 JASPAR yes 118214001
chr1 1070872 1070883 FOXH1 JASPAR yes 26182845
chr1 1070872 1070883 FOXH1 JASPAR yes 118214002
chr1 1070873 1070879 ZNF354C JASPAR yes 26182846
chr1 1070873 1070879 ZNF354C JASPAR yes 118214003
chr1 1070874 1070882 RHOXF1 JASPAR yes 26182847
chr1 1070874 1070882 RHOXF1 JASPAR yes 118214004
chr1 1070876 1070889 HSF1 JASPAR yes 26182848
chr1 1070876 1070889 HSF4 JASPAR yes 26182849
chr1 1070876 1070889 HSF1 JASPAR yes 118214005
chr1 1070876 1070889 HSF4 JASPAR yes 118214006
chr1 1070880 1070895 HSF1 JASPAR yes 26182850
chr1 1070880 1070895 HSF1 JASPAR yes 118214007
chr1 1070881 1070894 HSF1 JASPAR yes 26182851
chr1 1070881 1070894 HSF4 JASPAR yes 26182852
chr1 1070881 1070894 HSF1 JASPAR yes 118214008
chr1 1070881 1070894 HSF4 JASPAR yes 118214009
chr1 1070885 1070900 HSF1 JASPAR yes 26182853
chr1 1070885 1070900 HSF1 JASPAR yes 118214010
chr1 1070888 1070903 STAT1 JASPAR yes 26182854
chr1 1070888 1070903 STAT1 JASPAR yes 118214011
chr1 1070890 1070901 STAT1 JASPAR yes 26182855
chr1 1070890 1070901 STAT3 JASPAR yes 26182856
chr1 1070890 1070901 STAT1 JASPAR yes 118214012
chr1 1070890 1070901 STAT3 JASPAR yes 118214013
chr1 1070891 1070899 STAT6 TRANSFAC yes 26182857
chr1 1070891 1070899 STAT6 TRANSFAC yes 118214014
chr1 1070902 1070906 LFA1 TRANSFAC yes 26182858
chr1 1070902 1070906 LFA1 TRANSFAC yes 118214015
chr1 1070909 1070924 STAT1 JASPAR yes 26182859
chr1 1070909 1070924 STAT1 JASPAR yes 118214016
chr1 1070911 1070922 STAT1 JASPAR yes 26182860
chr1 1070911 1070922 STAT3 JASPAR yes 26182861
chr1 1070911 1070922 STAT1 JASPAR yes 118214017
chr1 1070911 1070922 STAT3 JASPAR yes 118214018
chr1 1070929 1070940 E2F6 JASPAR yes 26182862
chr1 1070929 1070940 E2F6 JASPAR yes 118214019
chr1 1070942 1070958 SRF JASPAR yes 26182863
chr1 1070942 1070958 SRF JASPAR yes 118214020
chr1 1070955 1070958 MYB TRANSFAC yes 26182864
chr1 1070955 1070958 MYB TRANSFAC yes 118214021
chr1 1070962 1070981 RFX2 JASPAR yes 26182865
chr1 1070962 1070981 RFX2 JASPAR yes 118214022
chr1 1070966 1070980 CREB3L1 JASPAR yes 26182866
chr1 1070966 1070980 CREB3L1 JASPAR yes 118214023
chr1 1070966 1070982 RFX2 JASPAR yes 26182867
chr1 1070966 1070982 RFX3 JASPAR yes 26182868
chr1 1070966 1070982 RFX4 JASPAR yes 26182869
chr1 1070966 1070982 RFX5 JASPAR yes 26182870
chr1 1070966 1070982 RFX2 JASPAR yes 118214024
chr1 1070966 1070982 RFX3 JASPAR yes 118214025
chr1 1070966 1070982 RFX4 JASPAR yes 118214026
chr1 1070966 1070982 RFX5 JASPAR yes 118214027
chr1 1070967 1070986 RFX2 JASPAR yes 26182871
chr1 1070967 1070986 RFX2 JASPAR yes 118214028
chr1 1070969 1070984 RFX5 JASPAR yes 26182872
chr1 1070969 1070984 RFX5 JASPAR yes 118214029
chr1 1070985 1070989 NFE TRANSFAC yes 26182873
chr1 1070985 1070989 NFE TRANSFAC yes 118214030
chr1 1070995 1071007 ZBTB7C JASPAR yes 26182874
chr1 1070995 1071007 ZBTB7C JASPAR yes 118214031
chr1 1070996 1071008 ZBTB7A JASPAR yes 26182875
chr1 1070996 1071008 ZBTB7A JASPAR yes 118214032
chr1 1070998 1071003 SP1 TRANSFAC yes 26182876
chr1 1070998 1071003 SP1 TRANSFAC yes 118214033
chr1 1071011 1071023 POU2F1 JASPAR yes 26182877
chr1 1071011 1071023 POU2F1 JASPAR yes 118214034
chr1 1071011 1071024 POU3F3 JASPAR yes 26182878
chr1 1071011 1071024 POU3F3 JASPAR yes 118214035
chr1 1071012 1071024 POU3F1 JASPAR yes 26182879
chr1 1071012 1071024 POU3F2 JASPAR yes 26182880
chr1 1071012 1071024 POU3F1 JASPAR yes 118214036
chr1 1071012 1071024 POU3F2 JASPAR yes 118214037
chr1 1071013 1071022 POU3F4 JASPAR yes 26182881
chr1 1071013 1071022 POU5F1B JASPAR yes 26182882
chr1 1071013 1071022 POU3F4 JASPAR yes 118214038
chr1 1071013 1071022 POU5F1B JASPAR yes 118214039
chr1 1071026 1071030 TEAD2 TRANSFAC yes 26182883
chr1 1071026 1071030 TEAD2 TRANSFAC yes 118214040
chr1 1071038 1071048 POU6F2 JASPAR yes 26182884
chr1 1071038 1071048 POU6F2 JASPAR yes 118214041
chr1 1071059 1071063 NFE TRANSFAC yes 26182885
chr1 1071059 1071063 NFE TRANSFAC yes 118214042
chr1 1071064 1071084 RREB1 JASPAR yes 26182886
chr1 1071064 1071084 RREB1 JASPAR yes 118214043
chr1 1071080 1071085 SP1 TRANSFAC yes 26182887
chr1 1071080 1071085 SP1 TRANSFAC yes 118214044
chr1 1071080 1071087 SP1 TRANSFAC yes 26182888
chr1 1071080 1071087 SP1 TRANSFAC yes 118214045
chr1 1071115 1071133 ESR2 JASPAR yes 26182889
chr1 1071115 1071133 ESR2 JASPAR yes 118214046
chr1 1071116 1071134 ESR1 JASPAR yes 26182890
chr1 1071116 1071134 ESR1 JASPAR yes 118214047
chr1 1071117 1071132 ESR2 JASPAR yes 26182891
chr1 1071117 1071132 ESR2 JASPAR yes 118214048
chr1 1071117 1071137 ESR1 JASPAR yes 26182892
chr1 1071117 1071137 ESR1 JASPAR yes 118214049
chr1 1071121 1071127 SOX10 JASPAR yes 26182893
chr1 1071121 1071127 SOX10 JASPAR yes 118214050
chr1 1071136 1071145 NFIX JASPAR yes 26182894
chr1 1071136 1071145 NFIX JASPAR yes 118214051
chr1 1071137 1071146 HIC2 JASPAR yes 26182895
chr1 1071137 1071146 HIC2 JASPAR yes 118214052
chr1 1071138 1071144 NFIC JASPAR yes 26182896
chr1 1071138 1071144 NFIC JASPAR yes 118214053
chr1 1071145 1071153 GATA1 TRANSFAC yes 26182897
chr1 1071145 1071153 GATA1 TRANSFAC yes 118214054
chr1 1071148 1071152 NFE TRANSFAC yes 26182898
chr1 1071148 1071152 NFE TRANSFAC yes 118214055
chr1 1071148 1071153 GATA1 TRANSFAC yes 26182899
chr1 1071148 1071153 GATA1 TRANSFAC yes 118214056
chr1 1071148 1071154 GATA3 JASPAR yes 26182900
chr1 1071148 1071154 GATA3 JASPAR yes 118214057
SNP sites on vista21[chr1:1070745-1071151]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 1070786 rs576887122 A G no 3372
chr1 1070797 rs113336637 C G
NFE2 TFAP2A TFAP2B TFAP2C
3373
chr1 1070798 rs112122435 C T
NFE2 TFAP2A TFAP2B TFAP2C
3374
chr1 1070804 rs370329424 G A
TFAP2A TFAP2B TFAP2C
3375
chr1 1070925 rs561882967 A G no 3376
chr1 1070942 rs149823930 T G
SRF
3377
chr1 1071046 rs112551400 G A
POU6F2
3378
chr1 1071118 rs10907183 G C,T
ESR1 ESR2
3379
Genes possibly regulated by vista21[chr1:1070745-1071151]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 1006346 1009687 - RNF223 ENSG00000237330.2 1009687 0.97 1.0 14 38942
chr1 1017198 1051741 - C1orf159 ENSG00000131591.13 1051741 0.65 1.0 15 80996
chr1 1109264 1133315 + TTLL10 ENSG00000162571.9 1109264 0.93 1.0 16 61887
chr1 1138888 1142071 - TNFRSF18 ENSG00000186891.9 1142071 0.88 1.0 17 29080
chr1 1146706 1149518 - TNFRSF4 ENSG00000186827.6 1149518 0.86 1.0 18 21633
chr1 1152288 1167411 - SDF4 ENSG00000078808.12 1167411 0.56 1.0 19 3740
chr1 1167629 1170421 + B3GALT6 ENSG00000176022.3 1167629 0.6 0.99 20 3522
Expression level of Genes
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miRNAs possibly regulated by vista21[chr1:1070745-1071151]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results