EnhancerDB
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  3. vista2139[chr1:78067790-78068312]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2139[chr1:78067790-78068312]
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Tissue distribution of vista2139
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Transcription factor that possibly regulate vista2139[chr1:78067790-78068312]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 78067790 78067794 TEAD2 TRANSFAC yes 118314368
chr1 78067790 78067800 ALX3 JASPAR yes 118314369
chr1 78067791 78067799 DLX6 JASPAR yes 118314370
chr1 78067791 78067799 MSX2 JASPAR yes 118314371
chr1 78067872 78067893 IRF1 JASPAR yes 118314372
chr1 78067875 78067880 ETS2 TRANSFAC yes 118314373
chr1 78067876 78067890 STAT1 JASPAR yes 118314374
chr1 78067876 78067891 STAT2 JASPAR yes 118314375
chr1 78067888 78067898 NFIA JASPAR yes 118314376
chr1 78067889 78067898 NFIX JASPAR yes 118314377
chr1 78067890 78067896 NFIC JASPAR yes 118314378
chr1 78067922 78067928 YY1 JASPAR yes 118314379
chr1 78067937 78067944 NKX3-1 JASPAR yes 118314380
chr1 78067942 78067953 FLI1 JASPAR yes 118314381
chr1 78067943 78067948 ETS2 TRANSFAC yes 118314382
chr1 78067958 78067972 SPIC JASPAR yes 118314383
chr1 78067989 78067992 MYB TRANSFAC yes 118314384
chr1 78067991 78068005 ONECUT3 JASPAR yes 118314385
chr1 78067992 78068003 FOXA1 JASPAR yes 118314386
chr1 78067992 78068007 FOXA1 JASPAR yes 118314387
chr1 78067993 78068004 FOXB1 JASPAR yes 118314388
chr1 78067993 78068004 FOXC1 JASPAR yes 118314389
chr1 78067993 78068005 FOXC2 JASPAR yes 118314390
chr1 78067994 78068006 FOXI1 JASPAR yes 118314391
chr1 78068001 78068004 MYB TRANSFAC yes 118314392
chr1 78068019 78068027 FOXL1 JASPAR yes 118314393
chr1 78068023 78068027 YY1 TRANSFAC yes 118314394
chr1 78068031 78068046 HNF1A JASPAR yes 118314395
chr1 78068072 78068087 HNF4G JASPAR yes 118314396
chr1 78068073 78068088 AR JASPAR yes 118314397
chr1 78068073 78068088 HNF4A JASPAR yes 118314398
chr1 78068075 78068089 MTF1 JASPAR yes 118314399
chr1 78068084 78068096 FOXI1 JASPAR yes 118314400
chr1 78068087 78068091 YY1 TRANSFAC yes 118314401
chr1 78068093 78068105 PBX1 JASPAR yes 118314402
chr1 78068095 78068105 CUX2 JASPAR yes 118314403
chr1 78068098 78068111 DUXA JASPAR yes 118314404
chr1 78068099 78068110 PROP1 JASPAR yes 118314405
chr1 78068100 78068112 MEF2A JASPAR yes 118314406
chr1 78068117 78068121 TEAD2 TRANSFAC yes 118314407
chr1 78068146 78068156 EMX1 JASPAR yes 118314408
chr1 78068146 78068156 EMX2 JASPAR yes 118314409
chr1 78068146 78068156 EN2 JASPAR yes 118314410
chr1 78068146 78068156 EVX1 JASPAR yes 118314411
chr1 78068146 78068156 EVX2 JASPAR yes 118314412
chr1 78068146 78068156 GBX1 JASPAR yes 118314413
chr1 78068146 78068156 HOXA2 JASPAR yes 118314414
chr1 78068146 78068156 HOXB2 JASPAR yes 118314415
chr1 78068146 78068156 HOXB3 JASPAR yes 118314416
chr1 78068146 78068156 MEOX1 JASPAR yes 118314417
chr1 78068146 78068156 MEOX2 JASPAR yes 118314418
chr1 78068200 78068218 NFYA JASPAR yes 118314419
chr1 78068215 78068225 ALX3 JASPAR yes 118314420
chr1 78068215 78068225 HESX1 JASPAR yes 118314421
chr1 78068224 78068228 YY1 TRANSFAC yes 118314422
chr1 78068240 78068255 FOXP1 JASPAR yes 118314423
chr1 78068241 78068252 FOXA1 JASPAR yes 118314424
chr1 78068243 78068254 FOXP2 JASPAR yes 118314425
chr1 78068255 78068270 TP53 JASPAR yes 118314426
chr1 78068258 78068262 H4TF2 TRANSFAC yes 118314427
chr1 78068272 78068276 YY1 TRANSFAC yes 118314428
chr1 78068275 78068279 YY1 TRANSFAC yes 118314429
chr1 78068279 78068293 ONECUT2 JASPAR yes 118314430
chr1 78068279 78068293 ONECUT3 JASPAR yes 118314431
chr1 78068281 78068302 IRF1 JASPAR yes 118314432
chr1 78068282 78068303 IRF1 JASPAR yes 118314433
chr1 78068284 78068305 IRF1 JASPAR yes 118314434
chr1 78068285 78068306 IRF1 JASPAR yes 118314435
chr1 78068286 78068301 FOXP1 JASPAR yes 118314436
chr1 78068286 78068307 IRF1 JASPAR yes 118314437
chr1 78068287 78068302 FOXP1 JASPAR yes 118314438
chr1 78068287 78068308 IRF1 JASPAR yes 118314439
chr1 78068288 78068303 FOXP1 JASPAR yes 118314440
chr1 78068288 78068309 IRF1 JASPAR yes 118314441
chr1 78068289 78068304 FOXP1 JASPAR yes 118314442
chr1 78068290 78068305 FOXP1 JASPAR yes 118314443
chr1 78068291 78068306 FOXP1 JASPAR yes 118314444
chr1 78068292 78068307 FOXP1 JASPAR yes 118314445
chr1 78068293 78068308 FOXP1 JASPAR yes 118314446
chr1 78068294 78068309 FOXP1 JASPAR yes 118314447
chr1 78068295 78068310 FOXP1 JASPAR yes 118314448
chr1 78068296 78068311 FOXP1 JASPAR yes 118314449
SNP sites on vista2139[chr1:78067790-78068312]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 78068001 rs186030071 A G
FOXA1 FOXB1 FOXC1 FOXC2 FOXI1 MYB ONECUT3
422359
chr1 78068045 rs190881837 T C
HNF1A
422360
chr1 78068078 rs549204936 A C
AR HNF4A HNF4G MTF1
422361
chr1 78068133 rs532424671 TG T no 422362
chr1 78068190 rs75218604 T A no 422363
chr1 78068284 rs74090674 C T
IRF1 ONECUT2 ONECUT3
422364
Genes possibly regulated by vista2139[chr1:78067790-78068312]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 78028101 78149104 - ZZZ3 ENSG00000036549.8 78149104 0.72 0.99 829 19208
Expression level of Genes
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miRNAs possibly regulated by vista2139[chr1:78067790-78068312]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results