EnhancerDB
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  3. vista21504[chr16:193028-193281]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21504[chr16:193028-193281]
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Tissue distribution of vista21504
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Transcription factor that possibly regulate vista21504[chr16:193028-193281]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 192609 193680 POLR2A UCSC Txn Factor no Conserved 108170014
chr16 192921 193436 GATA1 UCSC Txn Factor no Conserved 108170019
chr16 193018 193352 NR2F2 UCSC Txn Factor no Conserved 108170029
chr16 193019 193369 STAT5A UCSC Txn Factor no Conserved 108170032
chr16 193024 193340 EP300 UCSC Txn Factor no Conserved 108170035
chr16 193050 193334 TAL1 UCSC Txn Factor no Conserved 108170040
chr16 193056 193334 TEAD4 UCSC Txn Factor no Conserved 108170043
chr16 193078 193294 GATA2 UCSC Txn Factor no Conserved 108170046
chr16 193021 193035 GLIS2 JASPAR yes 9101032
chr16 193021 193035 GLIS3 JASPAR yes 9101033
chr16 193021 193035 GLIS2 JASPAR yes 49324392
chr16 193021 193035 GLIS3 JASPAR yes 49324393
chr16 193025 193033 TBX5 JASPAR yes 9101034
chr16 193025 193033 TBX5 JASPAR yes 49324394
chr16 193044 193048 YY1 TRANSFAC yes 9101035
chr16 193044 193048 YY1 TRANSFAC yes 49324395
chr16 193049 193064 MEF2C JASPAR yes 9101036
chr16 193049 193064 MEF2C JASPAR yes 49324396
chr16 193050 193065 MEF2A JASPAR yes 9101037
chr16 193050 193065 MEF2A JASPAR yes 49324397
chr16 193051 193063 MEF2A JASPAR yes 9101038
chr16 193051 193063 MEF2B JASPAR yes 9101039
chr16 193051 193063 MEF2D JASPAR yes 9101040
chr16 193051 193063 MEF2A JASPAR yes 49324398
chr16 193051 193063 MEF2B JASPAR yes 49324399
chr16 193051 193063 MEF2D JASPAR yes 49324400
chr16 193052 193062 MEF2A JASPAR yes 9101041
chr16 193052 193062 MEF2A JASPAR yes 49324401
chr16 193057 193067 MSC JASPAR yes 9101042
chr16 193057 193067 MSC JASPAR yes 49324402
chr16 193069 193083 RORA JASPAR yes 9101043
chr16 193069 193083 RORA JASPAR yes 49324403
chr16 193070 193080 RORA JASPAR yes 9101044
chr16 193070 193080 RORA JASPAR yes 49324404
chr16 193087 193095 FOXC1 JASPAR yes 9101045
chr16 193087 193095 FOXC1 JASPAR yes 49324405
chr16 193089 193096 POU2F1 TRANSFAC yes 9101046
chr16 193089 193096 POU2F1 TRANSFAC yes 49324406
chr16 193098 193119 IRF1 JASPAR yes 9101047
chr16 193098 193119 IRF1 JASPAR yes 49324407
chr16 193100 193115 IRF9 JASPAR yes 9101048
chr16 193100 193115 IRF9 JASPAR yes 49324408
chr16 193101 193115 IRF7 JASPAR yes 9101049
chr16 193101 193115 IRF8 JASPAR yes 9101050
chr16 193101 193115 IRF7 JASPAR yes 49324409
chr16 193101 193115 IRF8 JASPAR yes 49324410
chr16 193102 193116 STAT1 JASPAR yes 9101051
chr16 193102 193116 STAT1 JASPAR yes 49324411
chr16 193102 193117 STAT2 JASPAR yes 9101052
chr16 193102 193117 STAT2 JASPAR yes 49324412
chr16 193102 193120 IRF2 JASPAR yes 9101053
chr16 193102 193120 IRF2 JASPAR yes 49324413
chr16 193103 193115 IRF1 JASPAR yes 9101054
chr16 193103 193115 IRF1 JASPAR yes 49324414
chr16 193110 193122 INSM1 JASPAR yes 9101055
chr16 193110 193122 INSM1 JASPAR yes 49324415
chr16 193110 193124 RXRG JASPAR yes 9101056
chr16 193110 193124 RXRG JASPAR yes 49324416
chr16 193110 193125 NR2C2 JASPAR yes 9101057
chr16 193110 193125 NR2C2 JASPAR yes 49324417
chr16 193113 193126 NR2F1 JASPAR yes 9101058
chr16 193113 193126 NR2F1 JASPAR yes 49324418
chr16 193117 193132 NR2C2 JASPAR yes 9101059
chr16 193117 193132 NR2C2 JASPAR yes 49324419
chr16 193120 193130 SP1 JASPAR yes 9101060
chr16 193120 193130 SP1 JASPAR yes 49324420
chr16 193121 193129 EHF JASPAR yes 9101061
chr16 193121 193129 EHF JASPAR yes 49324421
chr16 193128 193148 TP53 JASPAR yes 9101062
chr16 193128 193148 TP53 JASPAR yes 49324422
chr16 193129 193144 TP53 JASPAR yes 9101063
chr16 193129 193144 TP53 JASPAR yes 49324423
chr16 193139 193150 ESRRA JASPAR yes 9101064
chr16 193139 193150 ESRRA JASPAR yes 49324424
chr16 193146 193152 NFIC JASPAR yes 9101065
chr16 193146 193152 NFIC JASPAR yes 49324425
chr16 193152 193157 GATA2 JASPAR yes 9101066
chr16 193152 193157 GATA2 JASPAR yes 49324426
chr16 193169 193173 H4TF2 TRANSFAC yes 9101067
chr16 193169 193173 H4TF2 TRANSFAC yes 49324427
chr16 193201 193212 YY2 JASPAR yes 9101068
chr16 193201 193212 YY2 JASPAR yes 49324428
chr16 193201 193220 CTCF JASPAR yes 9101069
chr16 193201 193220 CTCF JASPAR yes 49324429
chr16 193205 193211 YY1 JASPAR yes 9101070
chr16 193205 193211 YY1 JASPAR yes 49324430
chr16 193224 193229 SP1 TRANSFAC yes 9101071
chr16 193224 193229 SP1 TRANSFAC yes 49324431
chr16 193239 193256 BCL6B JASPAR yes 9101072
chr16 193239 193256 BCL6B JASPAR yes 49324432
chr16 193241 193245 NFE TRANSFAC yes 9101073
chr16 193241 193245 NFE TRANSFAC yes 49324433
chr16 193241 193246 GATA1 TRANSFAC yes 9101074
chr16 193241 193246 GATA1 TRANSFAC yes 49324434
chr16 193241 193247 GATA3 JASPAR yes 9101075
chr16 193241 193247 GATA3 JASPAR yes 49324435
chr16 193246 193266 TP53 JASPAR yes 9101076
chr16 193246 193266 TP53 JASPAR yes 49324436
chr16 193249 193267 TP53 JASPAR yes 9101077
chr16 193249 193267 TP73 JASPAR yes 9101078
chr16 193249 193267 TP53 JASPAR yes 49324437
chr16 193249 193267 TP73 JASPAR yes 49324438
chr16 193250 193270 TP53 JASPAR yes 9101079
chr16 193250 193270 TP53 JASPAR yes 49324439
chr16 193272 193284 NHLH1 JASPAR yes 9101080
chr16 193272 193284 NHLH1 JASPAR yes 49324440
chr16 193273 193283 TFAP4 JASPAR yes 9101081
chr16 193273 193283 TFAP4 JASPAR yes 49324441
SNP sites on vista21504[chr16:193028-193281]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 193087 rs139642887 C T
EP300 FOXC1 GATA1 GATA2 NR2F2 POLR2A STAT5A TAL1 TEAD4
4244457
chr16 193088 rs13336827 G A
EP300 FOXC1 GATA1 GATA2 NR2F2 POLR2A STAT5A TAL1 TEAD4
4244458
chr16 193129 rs541503222 C T
EHF EP300 GATA1 GATA2 NR2C2 NR2F2 POLR2A SP1 STAT5A TAL1 TEAD4 TP53
4244459
chr16 193205 rs149240166 C T
CTCF EP300 GATA1 GATA2 NR2F2 POLR2A STAT5A TAL1 TEAD4 YY1 YY2
4244460
chr16 193224 rs11864973 G A,T
EP300 GATA1 GATA2 NR2F2 POLR2A SP1 STAT5A TAL1 TEAD4
4244461
chr16 193240 rs114874569 C T
BCL6B EP300 GATA1 GATA2 NR2F2 POLR2A STAT5A TAL1 TEAD4
4244462
chr16 193265 rs369471701 C G
EP300 GATA1 GATA2 NR2F2 POLR2A STAT5A TAL1 TEAD4 TP53 TP73
4244463
Genes possibly regulated by vista21504[chr16:193028-193281]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 96407 103628 - POLR3K ENSG00000161980.5 103628 0.9 0.98 14326 10600
chr16 103010 107669 + SNRNP25 ENSG00000161981.6 103010 0.82 0.99 14327 9982
chr16 108058 126354 - RHBDF1 ENSG00000007384.11 126354 0.75 1.0 14328 33326
chr16 127006 135852 + MPG ENSG00000103152.7 127006 0.54 0.99 14329 33978
chr16 134273 188859 - NPRL3 ENSG00000103148.11 188859 0.67 1.0 14330 95831
chr16 202686 204502 + HBZ ENSG00000130656.4 202686 0.99 1.0 14331 90595
chr16 203891 216767 + HBM ENSG00000206177.2 203891 0.93 0.0 14332 89390
chr16 222846 223709 + HBA2 ENSG00000188536.8 222846 0.88 0.94 14333 70435
chr16 226679 227521 + HBA1 ENSG00000206172.4 226679 0.95 1.0 14334 66602
chr16 230452 231180 + HBQ1 ENSG00000086506.2 230452 0.94 0.92 14335 62829
chr16 238968 279462 - LUC7L ENSG00000007392.12 279462 0.66 0.99 14336 13819
chr16 284545 319942 + ITFG3 ENSG00000167930.11 284545 0.65 0.99 14337 8736
Expression level of Genes
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miRNAs possibly regulated by vista21504[chr16:193028-193281]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results