EnhancerDB
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  3. vista21519[chr16:643606-643989]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21519[chr16:643606-643989]
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Tissue distribution of vista21519
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Transcription factor that possibly regulate vista21519[chr16:643606-643989]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 643596 643609 ZBTB18 JASPAR yes 9116770
chr16 643596 643609 ZBTB18 JASPAR yes 49325138
chr16 643597 643609 PKNOX1 JASPAR yes 9116771
chr16 643597 643609 PKNOX2 JASPAR yes 9116772
chr16 643597 643609 PKNOX1 JASPAR yes 49325139
chr16 643597 643609 PKNOX2 JASPAR yes 49325140
chr16 643598 643607 SNAI2 JASPAR yes 9116773
chr16 643598 643607 SNAI2 JASPAR yes 49325141
chr16 643598 643608 FIGLA JASPAR yes 9116774
chr16 643598 643608 ID4 JASPAR yes 9116775
chr16 643598 643608 TCF3 JASPAR yes 9116776
chr16 643598 643608 TCF4 JASPAR yes 9116777
chr16 643598 643608 FIGLA JASPAR yes 49325142
chr16 643598 643608 ID4 JASPAR yes 49325143
chr16 643598 643608 TCF3 JASPAR yes 49325144
chr16 643598 643608 TCF4 JASPAR yes 49325145
chr16 643600 643609 ZEB1 JASPAR yes 9116778
chr16 643600 643609 ZEB1 JASPAR yes 49325146
chr16 643601 643609 TBX5 JASPAR yes 9116779
chr16 643601 643609 TBX5 JASPAR yes 49325147
chr16 643638 643652 JUN JASPAR yes 9116780
chr16 643638 643652 JUN JASPAR yes 49325148
chr16 643640 643651 BATF JASPAR yes 9116781
chr16 643640 643651 BATF JASPAR yes 49325149
chr16 643641 643652 FOSL2 JASPAR yes 9116782
chr16 643641 643652 JUNB JASPAR yes 9116783
chr16 643641 643652 FOSL2 JASPAR yes 49325150
chr16 643641 643652 JUNB JASPAR yes 49325151
chr16 643642 643653 FOS JASPAR yes 9116784
chr16 643642 643653 FOSL1 JASPAR yes 9116785
chr16 643642 643653 JUND JASPAR yes 9116786
chr16 643642 643653 NFE2 JASPAR yes 9116787
chr16 643642 643653 FOS JASPAR yes 49325152
chr16 643642 643653 FOSL1 JASPAR yes 49325153
chr16 643642 643653 JUND JASPAR yes 49325154
chr16 643642 643653 NFE2 JASPAR yes 49325155
chr16 643643 643652 JDP2 JASPAR yes 9116788
chr16 643643 643652 JDP2 JASPAR yes 49325156
chr16 643643 643654 FOSL2 JASPAR yes 9116789
chr16 643643 643654 JUNB JASPAR yes 9116790
chr16 643643 643654 FOSL2 JASPAR yes 49325157
chr16 643643 643654 JUNB JASPAR yes 49325158
chr16 643643 643657 JUN JASPAR yes 9116791
chr16 643643 643657 JUN JASPAR yes 49325159
chr16 643644 643655 BATF JASPAR yes 9116792
chr16 643644 643655 BATF JASPAR yes 49325160
chr16 643655 643666 ESRRA JASPAR yes 9116793
chr16 643655 643666 ESRRA JASPAR yes 49325161
chr16 643656 643664 NR4A2 JASPAR yes 9116794
chr16 643656 643664 NR4A2 JASPAR yes 49325162
chr16 643657 643667 RORA JASPAR yes 9116795
chr16 643657 643667 RORA JASPAR yes 49325163
chr16 643678 643683 USF2 TRANSFAC yes 9116796
chr16 643678 643683 USF2 TRANSFAC yes 49325164
chr16 643682 643701 PAX5 JASPAR yes 9116797
chr16 643682 643701 PAX5 JASPAR yes 49325165
chr16 643691 643709 TP63 JASPAR yes 9116798
chr16 643691 643709 TP73 JASPAR yes 9116799
chr16 643691 643709 TP63 JASPAR yes 49325166
chr16 643691 643709 TP73 JASPAR yes 49325167
chr16 643696 643708 GLI2 JASPAR yes 9116800
chr16 643696 643708 GLI2 JASPAR yes 49325168
chr16 643696 643711 RUNX2 JASPAR yes 9116801
chr16 643696 643711 RUNX2 JASPAR yes 49325169
chr16 643704 643709 SP1 TRANSFAC yes 9116802
chr16 643704 643709 SP1 TRANSFAC yes 49325170
chr16 643707 643728 REST JASPAR yes 9116803
chr16 643707 643728 REST JASPAR yes 49325171
chr16 643709 643724 SCRT1 JASPAR yes 9116804
chr16 643709 643724 SCRT1 JASPAR yes 49325172
chr16 643710 643720 ID4 JASPAR yes 9116805
chr16 643710 643720 TCF3 JASPAR yes 9116806
chr16 643710 643720 TCF4 JASPAR yes 9116807
chr16 643710 643720 ID4 JASPAR yes 49325173
chr16 643710 643720 TCF3 JASPAR yes 49325174
chr16 643710 643720 TCF4 JASPAR yes 49325175
chr16 643711 643720 SNAI2 JASPAR yes 9116808
chr16 643711 643720 SNAI2 JASPAR yes 49325176
chr16 643711 643724 SCRT2 JASPAR yes 9116809
chr16 643711 643724 SCRT2 JASPAR yes 49325177
chr16 643712 643717 USF2 TRANSFAC yes 9116810
chr16 643712 643717 USF2 TRANSFAC yes 49325178
chr16 643733 643746 ELF3 JASPAR yes 9116811
chr16 643733 643746 ELF3 JASPAR yes 49325179
chr16 643734 643744 GABPA JASPAR yes 9116812
chr16 643734 643744 GABPA JASPAR yes 49325180
chr16 643734 643745 ELF5 JASPAR yes 9116813
chr16 643734 643745 ELF5 JASPAR yes 49325181
chr16 643734 643747 ELF1 JASPAR yes 9116814
chr16 643734 643747 ELF1 JASPAR yes 49325182
chr16 643736 643742 ETS1 JASPAR yes 9116815
chr16 643736 643742 SPI1 JASPAR yes 9116816
chr16 643736 643742 ETS1 JASPAR yes 49325183
chr16 643736 643742 SPI1 JASPAR yes 49325184
chr16 643747 643759 SRF JASPAR yes 9116817
chr16 643747 643759 SRF JASPAR yes 49325185
chr16 643792 643807 STAT2 JASPAR yes 9116818
chr16 643792 643807 STAT2 JASPAR yes 49325186
chr16 643793 643807 STAT1 JASPAR yes 9116819
chr16 643793 643807 STAT1 JASPAR yes 49325187
chr16 643797 643802 ETS2 TRANSFAC yes 9116820
chr16 643797 643802 ETS2 TRANSFAC yes 49325188
chr16 643805 643816 TBX2 JASPAR yes 9116821
chr16 643805 643816 TBX2 JASPAR yes 49325189
chr16 643819 643827 NR4A2 JASPAR yes 9116822
chr16 643819 643827 NR4A2 JASPAR yes 49325190
chr16 643866 643875 POU3F4 JASPAR yes 9116823
chr16 643866 643875 POU5F1B JASPAR yes 9116824
chr16 643866 643875 POU3F4 JASPAR yes 49325191
chr16 643866 643875 POU5F1B JASPAR yes 49325192
chr16 643876 643887 ESRRA JASPAR yes 9116825
chr16 643876 643887 ESRRA JASPAR yes 49325193
chr16 643940 643954 MTF1 JASPAR yes 9116826
chr16 643940 643954 MTF1 JASPAR yes 49325194
chr16 643945 643960 ZIC3 JASPAR yes 9116827
chr16 643945 643960 ZIC4 JASPAR yes 9116828
chr16 643945 643960 ZIC3 JASPAR yes 49325195
chr16 643945 643960 ZIC4 JASPAR yes 49325196
chr16 643946 643960 ZIC1 JASPAR yes 9116829
chr16 643946 643960 ZIC1 JASPAR yes 49325197
chr16 643948 643959 E2F4 JASPAR yes 9116830
chr16 643948 643959 E2F4 JASPAR yes 49325198
chr16 643949 643954 SP1 TRANSFAC yes 9116831
chr16 643949 643954 SP1 TRANSFAC yes 49325199
chr16 643949 643955 SP1 TRANSFAC yes 9116832
chr16 643949 643955 SP1 TRANSFAC yes 49325200
SNP sites on vista21519[chr16:643606-643989]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 643873 rs17138458 A G
POU3F4 POU5F1B
4247416
chr16 643894 rs116903146 G A,C no 4247417
chr16 643964 rs530905279 A G no 4247418
Genes possibly regulated by vista21519[chr16:643606-643989]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 577717 604636 + CAPN15 ENSG00000103326.6 577717 0.65 1.0 14348 34111
chr16 610422 615528 + C16orf11 ENSG00000161992.5 610422 1.0 0.99 14349 66816
chr16 616995 634136 + PIGQ ENSG00000007541.10 616995 0.81 0.99 14350 73389
chr16 616996 619495 + NHLRC4 ENSG00000257108.1 616996 0.87 0.89 14351 73390
chr16 639357 679272 + RAB40C ENSG00000197562.5 639357 0.61 1.0 14352 95751
chr16 679239 684116 + WFIKKN1 ENSG00000127578.6 679239 0.75 0.99 14353 64750
chr16 684429 686358 - C16orf13 ENSG00000130731.11 686358 0.57 1.0 14354 57631
chr16 691813 698474 + FAM195A ENSG00000172366.15 691813 0.76 1.0 14355 52176
chr16 699311 717833 + WDR90 ENSG00000161996.13 699311 0.71 1.0 14356 44678
chr16 718086 724174 + RHOT2 ENSG00000140983.9 718086 0.6 1.0 14357 25903
chr16 725666 728268 + RHBDL1 ENSG00000103269.9 725666 0.7 1.0 14358 18323
chr16 730224 732870 + STUB1 ENSG00000103266.6 730224 0.49 1.0 14359 13765
chr16 731671 734529 - JMJD8 ENSG00000161999.7 734529 0.63 1.0 14360 9460
chr16 734622 740444 - WDR24 ENSG00000127580.11 740444 0.6 1.0 14361 3545
Expression level of Genes
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miRNAs possibly regulated by vista21519[chr16:643606-643989]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results