EnhancerDB
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  3. vista21520[chr16:651803-652154]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21520[chr16:651803-652154]
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Tissue distribution of vista21520
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Transcription factor that possibly regulate vista21520[chr16:651803-652154]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 651804 651825 IRF1 JASPAR yes 9117093
chr16 651804 651825 IRF1 JASPAR yes 49325201
chr16 651808 651823 FOXP1 JASPAR yes 9117094
chr16 651808 651823 FOXP1 JASPAR yes 49325202
chr16 651810 651825 FOXP1 JASPAR yes 9117095
chr16 651810 651825 FOXP1 JASPAR yes 49325203
chr16 651810 651831 IRF1 JASPAR yes 9117096
chr16 651810 651831 IRF1 JASPAR yes 49325204
chr16 651811 651832 IRF1 JASPAR yes 9117097
chr16 651811 651832 IRF1 JASPAR yes 49325205
chr16 651812 651827 FOXP1 JASPAR yes 9117098
chr16 651812 651827 FOXP1 JASPAR yes 49325206
chr16 651813 651828 FOXP1 JASPAR yes 9117099
chr16 651813 651828 FOXP1 JASPAR yes 49325207
chr16 651813 651834 IRF1 JASPAR yes 9117100
chr16 651813 651834 IRF1 JASPAR yes 49325208
chr16 651814 651820 TBP TRANSFAC yes 9117101
chr16 651814 651820 TBP TRANSFAC yes 49325209
chr16 651814 651829 FOXP1 JASPAR yes 9117102
chr16 651814 651829 FOXP1 JASPAR yes 49325210
chr16 651814 651835 IRF1 JASPAR yes 9117103
chr16 651814 651835 IRF1 JASPAR yes 49325211
chr16 651815 651830 FOXP1 JASPAR yes 9117104
chr16 651815 651830 FOXP1 JASPAR yes 49325212
chr16 651815 651836 IRF1 JASPAR yes 9117105
chr16 651815 651836 IRF1 JASPAR yes 49325213
chr16 651816 651831 FOXP1 JASPAR yes 9117106
chr16 651816 651831 FOXP1 JASPAR yes 49325214
chr16 651816 651837 IRF1 JASPAR yes 9117107
chr16 651816 651837 IRF1 JASPAR yes 49325215
chr16 651817 651832 FOXP1 JASPAR yes 9117108
chr16 651817 651832 FOXP1 JASPAR yes 49325216
chr16 651817 651838 IRF1 JASPAR yes 9117109
chr16 651817 651838 IRF1 JASPAR yes 49325217
chr16 651818 651833 FOXP1 JASPAR yes 9117110
chr16 651818 651833 FOXP1 JASPAR yes 49325218
chr16 651818 651839 IRF1 JASPAR yes 9117111
chr16 651818 651839 IRF1 JASPAR yes 49325219
chr16 651819 651834 FOXP1 JASPAR yes 9117112
chr16 651819 651834 FOXP1 JASPAR yes 49325220
chr16 651819 651840 IRF1 JASPAR yes 9117113
chr16 651819 651840 IRF1 JASPAR yes 49325221
chr16 651820 651835 FOXP1 JASPAR yes 9117114
chr16 651820 651835 FOXP1 JASPAR yes 49325222
chr16 651820 651841 IRF1 JASPAR yes 9117115
chr16 651820 651841 IRF1 JASPAR yes 49325223
chr16 651821 651836 FOXP1 JASPAR yes 9117116
chr16 651821 651836 FOXP1 JASPAR yes 49325224
chr16 651821 651842 IRF1 JASPAR yes 9117117
chr16 651821 651842 IRF1 JASPAR yes 49325225
chr16 651822 651837 FOXP1 JASPAR yes 9117118
chr16 651822 651837 FOXP1 JASPAR yes 49325226
chr16 651822 651843 IRF1 JASPAR yes 9117119
chr16 651822 651843 IRF1 JASPAR yes 49325227
chr16 651823 651838 FOXP1 JASPAR yes 9117120
chr16 651823 651838 FOXP1 JASPAR yes 49325228
chr16 651823 651844 IRF1 JASPAR yes 9117121
chr16 651823 651844 IRF1 JASPAR yes 49325229
chr16 651824 651839 FOXP1 JASPAR yes 9117122
chr16 651824 651839 FOXP1 JASPAR yes 49325230
chr16 651824 651845 IRF1 JASPAR yes 9117123
chr16 651824 651845 IRF1 JASPAR yes 49325231
chr16 651825 651840 FOXP1 JASPAR yes 9117124
chr16 651825 651840 FOXP1 JASPAR yes 49325232
chr16 651825 651846 IRF1 JASPAR yes 9117125
chr16 651825 651846 IRF1 JASPAR yes 49325233
chr16 651826 651841 FOXP1 JASPAR yes 9117126
chr16 651826 651841 FOXP1 JASPAR yes 49325234
chr16 651826 651847 IRF1 JASPAR yes 9117127
chr16 651826 651847 IRF1 JASPAR yes 49325235
chr16 651827 651842 FOXP1 JASPAR yes 9117128
chr16 651827 651842 FOXP1 JASPAR yes 49325236
chr16 651827 651848 IRF1 JASPAR yes 9117129
chr16 651827 651848 IRF1 JASPAR yes 49325237
chr16 651828 651843 FOXP1 JASPAR yes 9117130
chr16 651828 651843 FOXP1 JASPAR yes 49325238
chr16 651828 651849 IRF1 JASPAR yes 9117131
chr16 651828 651849 IRF1 JASPAR yes 49325239
chr16 651829 651844 FOXP1 JASPAR yes 9117132
chr16 651829 651844 FOXP1 JASPAR yes 49325240
chr16 651830 651845 FOXP1 JASPAR yes 9117133
chr16 651830 651845 FOXP1 JASPAR yes 49325241
chr16 651830 651851 IRF1 JASPAR yes 9117134
chr16 651830 651851 IRF1 JASPAR yes 49325242
chr16 651831 651846 FOXP1 JASPAR yes 9117135
chr16 651831 651846 FOXP1 JASPAR yes 49325243
chr16 651832 651847 FOXP1 JASPAR yes 9117136
chr16 651832 651847 FOXP1 JASPAR yes 49325244
chr16 651846 651856 ETS1 JASPAR yes 9117137
chr16 651846 651856 ETV5 JASPAR yes 9117138
chr16 651846 651856 ETS1 JASPAR yes 49325245
chr16 651846 651856 ETV5 JASPAR yes 49325246
chr16 651854 651865 FOSL2 JASPAR yes 9117139
chr16 651854 651865 FOSL2 JASPAR yes 49325247
chr16 651870 651891 LUN1 TRANSFAC yes 9117140
chr16 651870 651891 LUN1 TRANSFAC yes 49325248
chr16 651887 651901 PLAG1 JASPAR yes 9117141
chr16 651887 651901 PLAG1 JASPAR yes 49325249
chr16 651895 651900 SP1 TRANSFAC yes 9117142
chr16 651895 651900 SP1 TRANSFAC yes 49325250
chr16 651899 651916 RXRA JASPAR yes 9117143
chr16 651899 651916 RXRA JASPAR yes 49325251
chr16 651900 651906 ZNF354C JASPAR yes 9117144
chr16 651900 651906 ZNF354C JASPAR yes 49325252
chr16 651907 651920 NR2F1 JASPAR yes 9117145
chr16 651907 651920 NR2F1 JASPAR yes 49325253
chr16 651911 651915 ESR1 TRANSFAC yes 9117146
chr16 651911 651915 ESR1 TRANSFAC yes 49325254
chr16 651919 651924 NFY TRANSFAC yes 9117147
chr16 651919 651924 NFY TRANSFAC yes 49325255
chr16 651941 651952 CEBPB JASPAR yes 9117148
chr16 651941 651952 CEBPB JASPAR yes 49325256
chr16 651968 651972 TEAD2 TRANSFAC yes 9117149
chr16 651968 651972 TEAD2 TRANSFAC yes 49325257
chr16 651968 651973 TBP TRANSFAC yes 9117150
chr16 651968 651973 TBP TRANSFAC yes 49325258
chr16 651968 651974 TFIID TRANSFAC yes 9117151
chr16 651968 651974 TFIID TRANSFAC yes 49325259
chr16 651977 651997 RREB1 JASPAR yes 9117152
chr16 651977 651997 RREB1 JASPAR yes 49325260
chr16 651979 651994 RUNX2 JASPAR yes 9117153
chr16 651979 651994 RUNX2 JASPAR yes 49325261
chr16 651994 651998 LFA1 TRANSFAC yes 9117154
chr16 651994 651998 LFA1 TRANSFAC yes 49325262
chr16 651995 652005 ID4 JASPAR yes 9117155
chr16 651995 652005 TCF3 JASPAR yes 9117156
chr16 651995 652005 TCF4 JASPAR yes 9117157
chr16 651995 652005 ID4 JASPAR yes 49325263
chr16 651995 652005 TCF3 JASPAR yes 49325264
chr16 651995 652005 TCF4 JASPAR yes 49325265
chr16 651996 652005 SNAI2 JASPAR yes 9117158
chr16 651996 652005 SNAI2 JASPAR yes 49325266
chr16 651997 652002 USF2 TRANSFAC yes 9117159
chr16 651997 652002 USF2 TRANSFAC yes 49325267
chr16 652022 652035 ATF4 JASPAR yes 9117160
chr16 652022 652035 ATF4 JASPAR yes 49325268
chr16 652058 652075 ESR1 JASPAR yes 9117161
chr16 652058 652075 ESR1 JASPAR yes 49325269
chr16 652076 652087 CEBPB JASPAR yes 9117162
chr16 652076 652087 CEBPB JASPAR yes 49325270
chr16 652077 652088 CEBPA JASPAR yes 9117163
chr16 652077 652088 CEBPA JASPAR yes 49325271
chr16 652100 652104 LFA1 TRANSFAC yes 9117164
chr16 652100 652104 LFA1 TRANSFAC yes 49325272
chr16 652104 652114 MSC JASPAR yes 9117165
chr16 652104 652114 MSC JASPAR yes 49325273
chr16 652113 652125 IRF1 JASPAR yes 9117166
chr16 652113 652125 IRF1 JASPAR yes 49325274
chr16 652113 652128 FOXP1 JASPAR yes 9117167
chr16 652113 652128 FOXP1 JASPAR yes 49325275
chr16 652114 652135 IRF1 JASPAR yes 9117168
chr16 652114 652135 IRF1 JASPAR yes 49325276
chr16 652115 652135 RREB1 JASPAR yes 9117169
chr16 652115 652135 RREB1 JASPAR yes 49325277
chr16 652147 652151 YY1 TRANSFAC yes 9117170
chr16 652147 652151 YY1 TRANSFAC yes 49325278
chr16 652148 652158 HOXC10 JASPAR yes 9117171
chr16 652148 652158 HOXD11 JASPAR yes 9117172
chr16 652148 652158 HOXC10 JASPAR yes 49325279
chr16 652148 652158 HOXD11 JASPAR yes 49325280
chr16 652148 652159 HOXC11 JASPAR yes 9117173
chr16 652148 652159 HOXD12 JASPAR yes 9117174
chr16 652148 652159 HOXC11 JASPAR yes 49325281
chr16 652148 652159 HOXD12 JASPAR yes 49325282
chr16 652148 652163 HNF1A JASPAR yes 9117175
chr16 652148 652163 HNF1A JASPAR yes 49325283
chr16 652149 652162 HNF1B JASPAR yes 9117176
chr16 652149 652162 HNF1B JASPAR yes 49325284
chr16 652149 652163 ONECUT2 JASPAR yes 9117177
chr16 652149 652163 ONECUT3 JASPAR yes 9117178
chr16 652149 652163 ONECUT2 JASPAR yes 49325285
chr16 652149 652163 ONECUT3 JASPAR yes 49325286
chr16 652153 652169 POU4F2 JASPAR yes 9117179
chr16 652153 652169 POU4F2 JASPAR yes 49325287
SNP sites on vista21520[chr16:651803-652154]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 651850 rs565335898 G A,T
ETS1 ETV5 IRF1
4247541
chr16 651893 rs371914210 C T
PLAG1
4247542
chr16 651913 rs565774352 G A
ESR1 NR2F1 RXRA
4247543
chr16 651954 rs151174150 C T no 4247544
chr16 651960 rs140650628 T C no 4247545
chr16 651994 rs558516372 C T
LFA1 RREB1 RUNX2
4247546
chr16 652045 rs112610137 C G no 4247547
chr16 652122 rs561588722 A C
FOXP1 IRF1 RREB1
4247548
Genes possibly regulated by vista21520[chr16:651803-652154]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 577717 604636 + CAPN15 ENSG00000103326.6 577717 0.65 1.0 14348 25914
chr16 610422 615528 + C16orf11 ENSG00000161992.5 610422 1.0 0.99 14349 58619
chr16 616995 634136 + PIGQ ENSG00000007541.10 616995 0.81 0.99 14350 65192
chr16 616996 619495 + NHLRC4 ENSG00000257108.1 616996 0.87 0.89 14351 65193
chr16 639357 679272 + RAB40C ENSG00000197562.5 639357 0.61 1.0 14352 87554
chr16 679239 684116 + WFIKKN1 ENSG00000127578.6 679239 0.75 0.99 14353 72915
chr16 684429 686358 - C16orf13 ENSG00000130731.11 686358 0.57 1.0 14354 65796
chr16 691813 698474 + FAM195A ENSG00000172366.15 691813 0.76 1.0 14355 60341
chr16 699311 717833 + WDR90 ENSG00000161996.13 699311 0.71 1.0 14356 52843
chr16 718086 724174 + RHOT2 ENSG00000140983.9 718086 0.6 1.0 14357 34068
chr16 725666 728268 + RHBDL1 ENSG00000103269.9 725666 0.7 1.0 14358 26488
chr16 730224 732870 + STUB1 ENSG00000103266.6 730224 0.49 1.0 14359 21930
chr16 731671 734529 - JMJD8 ENSG00000161999.7 734529 0.63 1.0 14360 17625
chr16 734622 740444 - WDR24 ENSG00000127580.11 740444 0.6 1.0 14361 11710
Expression level of Genes
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miRNAs possibly regulated by vista21520[chr16:651803-652154]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results