EnhancerDB
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  3. vista21521[chr16:658205-658397]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21521[chr16:658205-658397]
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Tissue distribution of vista21521
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Transcription factor that possibly regulate vista21521[chr16:658205-658397]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 658205 658220 MAFK JASPAR yes 9117725
chr16 658205 658220 MAFK JASPAR yes 49325288
chr16 658217 658227 MZF1 JASPAR yes 9117726
chr16 658217 658227 MZF1 JASPAR yes 49325289
chr16 658220 658233 NFKB1 JASPAR yes 9117727
chr16 658220 658233 NFKB2 JASPAR yes 9117728
chr16 658220 658233 NFKB1 JASPAR yes 49325290
chr16 658220 658233 NFKB2 JASPAR yes 49325291
chr16 658221 658232 NFKB1 JASPAR yes 9117729
chr16 658221 658232 NFKB1 JASPAR yes 49325292
chr16 658222 658227 ETS2 TRANSFAC yes 9117730
chr16 658222 658227 ETS2 TRANSFAC yes 49325293
chr16 658222 658232 NFKB1 JASPAR yes 9117731
chr16 658222 658232 RELA JASPAR yes 9117732
chr16 658222 658232 NFKB1 JASPAR yes 49325294
chr16 658222 658232 RELA JASPAR yes 49325295
chr16 658222 658233 NFKB1 JASPAR yes 9117733
chr16 658222 658233 NFKB1 JASPAR yes 49325296
chr16 658228 658234 SP1 TRANSFAC yes 9117734
chr16 658228 658234 SP1 TRANSFAC yes 49325297
chr16 658237 658256 CTCF JASPAR yes 9117735
chr16 658237 658256 CTCF JASPAR yes 49325298
chr16 658242 658251 SNAI2 JASPAR yes 9117736
chr16 658242 658251 SNAI2 JASPAR yes 49325299
chr16 658242 658252 SREBF2 JASPAR yes 9117737
chr16 658242 658252 SREBF2 JASPAR yes 49325300
chr16 658257 658277 RREB1 JASPAR yes 9117738
chr16 658257 658277 RREB1 JASPAR yes 49325301
chr16 658265 658275 GCM2 JASPAR yes 9117739
chr16 658265 658275 GCM2 JASPAR yes 49325302
chr16 658265 658285 RREB1 JASPAR yes 9117740
chr16 658265 658285 RREB1 JASPAR yes 49325303
chr16 658276 658291 ZIC3 JASPAR yes 9117741
chr16 658276 658291 ZIC4 JASPAR yes 9117742
chr16 658276 658291 ZIC3 JASPAR yes 49325304
chr16 658276 658291 ZIC4 JASPAR yes 49325305
chr16 658277 658291 ZIC1 JASPAR yes 9117743
chr16 658277 658291 ZIC1 JASPAR yes 49325306
chr16 658285 658298 NFKB1 JASPAR yes 9117744
chr16 658285 658298 NFKB2 JASPAR yes 9117745
chr16 658285 658298 NFKB1 JASPAR yes 49325307
chr16 658285 658298 NFKB2 JASPAR yes 49325308
chr16 658292 658302 ZNF740 JASPAR yes 9117746
chr16 658292 658302 ZNF740 JASPAR yes 49325309
chr16 658293 658303 GCM2 JASPAR yes 9117747
chr16 658293 658303 GCM2 JASPAR yes 49325310
chr16 658300 658313 DUXA JASPAR yes 9117748
chr16 658300 658313 DUXA JASPAR yes 49325311
chr16 658301 658312 PHOX2A JASPAR yes 9117749
chr16 658301 658312 PROP1 JASPAR yes 9117750
chr16 658301 658312 PHOX2A JASPAR yes 49325312
chr16 658301 658312 PROP1 JASPAR yes 49325313
chr16 658303 658314 HOXA10 JASPAR yes 9117751
chr16 658303 658314 HOXA10 JASPAR yes 49325314
chr16 658304 658314 ALX3 JASPAR yes 9117752
chr16 658304 658314 GSX2 JASPAR yes 9117753
chr16 658304 658314 HOXB2 JASPAR yes 9117754
chr16 658304 658314 MNX1 JASPAR yes 9117755
chr16 658304 658314 ALX3 JASPAR yes 49325315
chr16 658304 658314 GSX2 JASPAR yes 49325316
chr16 658304 658314 HOXB2 JASPAR yes 49325317
chr16 658304 658314 MNX1 JASPAR yes 49325318
chr16 658305 658313 LMX1A JASPAR yes 9117756
chr16 658305 658313 LMX1B JASPAR yes 9117757
chr16 658305 658313 NKX6-1 JASPAR yes 9117758
chr16 658305 658313 NKX6-2 JASPAR yes 9117759
chr16 658305 658313 VAX1 JASPAR yes 9117760
chr16 658305 658313 VAX2 JASPAR yes 9117761
chr16 658305 658313 VSX1 JASPAR yes 9117762
chr16 658305 658313 VSX2 JASPAR yes 9117763
chr16 658305 658313 LMX1A JASPAR yes 49325319
chr16 658305 658313 LMX1B JASPAR yes 49325320
chr16 658305 658313 NKX6-1 JASPAR yes 49325321
chr16 658305 658313 NKX6-2 JASPAR yes 49325322
chr16 658305 658313 VAX1 JASPAR yes 49325323
chr16 658305 658313 VAX2 JASPAR yes 49325324
chr16 658305 658313 VSX1 JASPAR yes 49325325
chr16 658305 658313 VSX2 JASPAR yes 49325326
chr16 658305 658315 POU6F2 JASPAR yes 9117764
chr16 658305 658315 POU6F2 JASPAR yes 49325327
chr16 658320 658337 RXRA JASPAR yes 9117765
chr16 658320 658337 RXRA JASPAR yes 49325328
chr16 658323 658329 SP1 TRANSFAC yes 9117766
chr16 658323 658329 SP1 TRANSFAC yes 49325329
chr16 658323 658333 SP1 JASPAR yes 9117767
chr16 658323 658333 SP1 JASPAR yes 49325330
chr16 658325 658330 SP1 TRANSFAC yes 9117768
chr16 658325 658330 SP1 TRANSFAC yes 49325331
chr16 658339 658344 TFAP2A TRANSFAC yes 9117769
chr16 658339 658344 TFAP2A TRANSFAC yes 49325332
chr16 658339 658345 MZF1 JASPAR yes 9117770
chr16 658339 658345 MZF1 JASPAR yes 49325333
chr16 658340 658350 GSC2 JASPAR yes 9117771
chr16 658340 658350 GSC JASPAR yes 9117772
chr16 658340 658350 GSC2 JASPAR yes 49325334
chr16 658340 658350 GSC JASPAR yes 49325335
chr16 658341 658349 OTX1 JASPAR yes 9117773
chr16 658341 658349 OTX1 JASPAR yes 49325336
chr16 658341 658350 PITX3 JASPAR yes 9117774
chr16 658341 658350 PITX3 JASPAR yes 49325337
chr16 658351 658361 TBX21 JASPAR yes 9117775
chr16 658351 658361 TBX21 JASPAR yes 49325338
chr16 658360 658374 E2F7 JASPAR yes 9117776
chr16 658360 658374 E2F7 JASPAR yes 49325339
chr16 658361 658371 SP1 JASPAR yes 9117777
chr16 658361 658371 SP1 JASPAR yes 49325340
chr16 658362 658372 SP1 JASPAR yes 9117778
chr16 658362 658372 SP1 JASPAR yes 49325341
chr16 658363 658368 SP1 TRANSFAC yes 9117779
chr16 658363 658368 SP1 TRANSFAC yes 49325342
chr16 658364 658369 SP1 TRANSFAC yes 9117780
chr16 658364 658369 SP1 TRANSFAC yes 49325343
chr16 658364 658370 SP1 TRANSFAC yes 9117781
chr16 658364 658370 SP1 TRANSFAC yes 49325344
chr16 658378 658392 GATA2 JASPAR yes 9117782
chr16 658378 658392 GATA2 JASPAR yes 49325345
chr16 658382 658390 GATA5 JASPAR yes 9117783
chr16 658382 658390 GATA5 JASPAR yes 49325346
SNP sites on vista21521[chr16:658205-658397]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 658258 rs547778186 AACTC A
RREB1
4247653
chr16 658271 rs11248941 G A,T
GCM2 RREB1
4247654
chr16 658284 rs570171016 A AG
RREB1 ZIC1 ZIC3 ZIC4
4247655
chr16 658326 rs141130105 C T
RXRA SP1
4247656
chr16 658330 rs146195336 C T
RXRA SP1
4247657
chr16 658370 rs139197120 G T
E2F7 SP1
4247658
chr16 658390 rs553578462 A G
GATA2 GATA5
4247659
Genes possibly regulated by vista21521[chr16:658205-658397]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 577717 604636 + CAPN15 ENSG00000103326.6 577717 0.65 1.0 14348 19512
chr16 610422 615528 + C16orf11 ENSG00000161992.5 610422 1.0 0.99 14349 52217
chr16 616995 634136 + PIGQ ENSG00000007541.10 616995 0.81 0.99 14350 58790
chr16 616996 619495 + NHLRC4 ENSG00000257108.1 616996 0.87 0.89 14351 58791
chr16 639357 679272 + RAB40C ENSG00000197562.5 639357 0.61 1.0 14352 81152
chr16 679239 684116 + WFIKKN1 ENSG00000127578.6 679239 0.75 0.99 14353 79158
chr16 684429 686358 - C16orf13 ENSG00000130731.11 686358 0.57 1.0 14354 72039
chr16 691813 698474 + FAM195A ENSG00000172366.15 691813 0.76 1.0 14355 66584
chr16 699311 717833 + WDR90 ENSG00000161996.13 699311 0.71 1.0 14356 59086
chr16 718086 724174 + RHOT2 ENSG00000140983.9 718086 0.6 1.0 14357 40311
chr16 725666 728268 + RHBDL1 ENSG00000103269.9 725666 0.7 1.0 14358 32731
chr16 730224 732870 + STUB1 ENSG00000103266.6 730224 0.49 1.0 14359 28173
chr16 731671 734529 - JMJD8 ENSG00000161999.7 734529 0.63 1.0 14360 23868
chr16 734622 740444 - WDR24 ENSG00000127580.11 740444 0.6 1.0 14361 17953
chr16 742500 755829 - FBXL16 ENSG00000127585.7 755829 0.91 1.0 14362 2568
Expression level of Genes
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miRNAs possibly regulated by vista21521[chr16:658205-658397]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results