EnhancerDB
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  3. vista21522[chr16:729341-729555]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21522[chr16:729341-729555]
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Tissue distribution of vista21522
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Transcription factor that possibly regulate vista21522[chr16:729341-729555]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 729418 729860 PHF8 UCSC Txn Factor no Conserved 108170905
chr16 729341 729355 CREB3 JASPAR yes 49325347
chr16 729341 729355 CREB3L1 JASPAR yes 49325348
chr16 729348 729361 ELF1 JASPAR yes 49325349
chr16 729349 729359 ELK1 JASPAR yes 49325350
chr16 729351 729360 ELK4 JASPAR yes 49325351
chr16 729351 729361 ELK1 JASPAR yes 49325352
chr16 729351 729361 ELK3 JASPAR yes 49325353
chr16 729351 729361 ERF JASPAR yes 49325354
chr16 729351 729361 ERG JASPAR yes 49325355
chr16 729351 729361 ETS1 JASPAR yes 49325356
chr16 729351 729361 ETV1 JASPAR yes 49325357
chr16 729351 729361 ETV3 JASPAR yes 49325358
chr16 729351 729361 ETV4 JASPAR yes 49325359
chr16 729351 729361 ETV5 JASPAR yes 49325360
chr16 729351 729361 ETV6 JASPAR yes 49325361
chr16 729351 729361 FEV JASPAR yes 49325362
chr16 729351 729361 FLI1 JASPAR yes 49325363
chr16 729351 729361 GABPA JASPAR yes 49325364
chr16 729351 729362 ELK4 JASPAR yes 49325365
chr16 729351 729362 FLI1 JASPAR yes 49325366
chr16 729353 729359 ETS1 JASPAR yes 49325367
chr16 729353 729359 SPI1 JASPAR yes 49325368
chr16 729363 729378 ZIC4 JASPAR yes 49325369
chr16 729364 729378 GLIS2 JASPAR yes 49325370
chr16 729364 729378 GLIS3 JASPAR yes 49325371
chr16 729364 729378 ZIC1 JASPAR yes 49325372
chr16 729373 729393 ESR1 JASPAR yes 49325373
chr16 729378 729393 ESR2 JASPAR yes 49325374
chr16 729378 729398 ESR1 JASPAR yes 49325375
chr16 729379 729383 ESR1 TRANSFAC yes 49325376
chr16 729384 729398 PLAG1 JASPAR yes 49325377
chr16 729415 729424 SP1 TRANSFAC yes 49325378
chr16 729416 729422 SP1 TRANSFAC yes 49325379
chr16 729416 729426 SP1 JASPAR yes 49325380
chr16 729417 729424 SP1 TRANSFAC yes 49325381
chr16 729418 729423 SP1 TRANSFAC yes 49325382
chr16 729418 729424 SP1 TRANSFAC yes 49325383
chr16 729418 729425 SP1 TRANSFAC yes 49325384
chr16 729436 729443 SP1 TRANSFAC yes 49325385
chr16 729437 729442 SP1 TRANSFAC yes 49325386
chr16 729437 729443 SP1 TRANSFAC yes 49325387
chr16 729440 729446 SP1 TRANSFAC yes 49325388
chr16 729449 729466 PAX1 JASPAR yes 49325389
chr16 729449 729466 PAX9 JASPAR yes 49325390
chr16 729453 729458 SP1 TRANSFAC yes 49325391
chr16 729458 729462 H1TF2 TRANSFAC yes 49325392
chr16 729458 729462 NFE TRANSFAC yes 49325393
chr16 729458 729462 SRF TRANSFAC yes 49325394
chr16 729481 729502 REST JASPAR yes 49325395
chr16 729484 729499 TFAP2C JASPAR yes 49325396
chr16 729486 729498 TFAP2B JASPAR yes 49325397
chr16 729486 729498 TFAP2C JASPAR yes 49325398
chr16 729486 729499 TFAP2A JASPAR yes 49325399
chr16 729486 729499 TFAP2B JASPAR yes 49325400
chr16 729486 729499 TFAP2C JASPAR yes 49325401
chr16 729486 729501 TFAP2A JASPAR yes 49325402
chr16 729486 729501 TFAP2C JASPAR yes 49325403
chr16 729493 729501 SP1 TRANSFAC yes 49325404
chr16 729494 729499 SP1 TRANSFAC yes 49325405
chr16 729495 729500 SP1 TRANSFAC yes 49325406
chr16 729501 729506 SP1 TRANSFAC yes 49325407
chr16 729546 729554 MEIS3 JASPAR yes 49325408
chr16 729547 729551 NFE TRANSFAC yes 49325409
SNP sites on vista21522[chr16:729341-729555]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 729415 rs74792309 G C
SP1
4248188
chr16 729441 rs528360045 C T
PHF8 SP1
4248189
chr16 729444 rs77956882 C A,T
PHF8 SP1
4248190
chr16 729456 rs80275448 G T
PAX1 PAX9 PHF8 SP1
4248191
chr16 729480 rs60691837 G A
PHF8
4248192
Genes possibly regulated by vista21522[chr16:729341-729555]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 639357 679272 + RAB40C ENSG00000197562.5 639357 0.61 1.0 14352 10016
chr16 679239 684116 + WFIKKN1 ENSG00000127578.6 679239 0.75 0.99 14353 49898
chr16 684429 686358 - C16orf13 ENSG00000130731.11 686358 0.57 1.0 14354 57017
chr16 691813 698474 + FAM195A ENSG00000172366.15 691813 0.76 1.0 14355 62472
chr16 699311 717833 + WDR90 ENSG00000161996.13 699311 0.71 1.0 14356 69970
chr16 718086 724174 + RHOT2 ENSG00000140983.9 718086 0.6 1.0 14357 88745
chr16 725666 728268 + RHBDL1 ENSG00000103269.9 725666 0.7 1.0 14358 96325
chr16 730224 732870 + STUB1 ENSG00000103266.6 730224 0.49 1.0 14359 99331
chr16 731671 734529 - JMJD8 ENSG00000161999.7 734529 0.63 1.0 14360 95026
chr16 734622 740444 - WDR24 ENSG00000127580.11 740444 0.6 1.0 14361 89111
chr16 742500 755829 - FBXL16 ENSG00000127585.7 755829 0.91 1.0 14362 73726
chr16 765115 769655 + METRN ENSG00000103260.4 765115 0.82 1.0 14363 64440
chr16 770581 772601 + FAM173A ENSG00000103254.5 770581 0.56 1.0 14364 58974
chr16 772582 776954 - CCDC78 ENSG00000162004.12 776954 0.89 0.99 14365 52601
chr16 776936 785525 + HAGHL ENSG00000103253.13 776936 0.78 1.0 14366 52619
chr16 779753 791329 - NARFL ENSG00000103245.9 791329 0.59 1.0 14367 38226
chr16 810762 818865 + MSLN ENSG00000102854.10 810762 0.98 1.0 14368 18793
Expression level of Genes
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miRNAs possibly regulated by vista21522[chr16:729341-729555]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results