EnhancerDB
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  3. vista21543[chr16:1295489-1295973]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21543[chr16:1295489-1295973]
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Tissue distribution of vista21543
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Transcription factor that possibly regulate vista21543[chr16:1295489-1295973]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 1295527 1295534 CEBPA TRANSFAC yes 9145483
chr16 1295527 1295534 CEBPA TRANSFAC yes 49326332
chr16 1295537 1295541 ESR1 TRANSFAC yes 9145484
chr16 1295537 1295541 ESR1 TRANSFAC yes 49326333
chr16 1295538 1295549 NRL JASPAR yes 9145485
chr16 1295538 1295549 NRL JASPAR yes 49326334
chr16 1295556 1295562 NFIC JASPAR yes 9145486
chr16 1295556 1295562 NFIC JASPAR yes 49326335
chr16 1295558 1295562 H1TF2 TRANSFAC yes 9145487
chr16 1295558 1295562 NFE TRANSFAC yes 9145488
chr16 1295558 1295562 SRF TRANSFAC yes 9145489
chr16 1295558 1295562 H1TF2 TRANSFAC yes 49326336
chr16 1295558 1295562 NFE TRANSFAC yes 49326337
chr16 1295558 1295562 SRF TRANSFAC yes 49326338
chr16 1295560 1295569 SOX9 JASPAR yes 9145490
chr16 1295560 1295569 SOX9 JASPAR yes 49326339
chr16 1295566 1295571 TFAP2A TRANSFAC yes 9145491
chr16 1295566 1295571 TFAP2A TRANSFAC yes 49326340
chr16 1295566 1295572 MZF1 JASPAR yes 9145492
chr16 1295566 1295572 MZF1 JASPAR yes 49326341
chr16 1295578 1295583 ATF1 TRANSFAC yes 9145493
chr16 1295578 1295583 ATF1 TRANSFAC yes 49326342
chr16 1295594 1295601 E2F1 TRANSFAC yes 9145494
chr16 1295594 1295601 E2F1 TRANSFAC yes 49326343
chr16 1295594 1295609 TFAP2A JASPAR yes 9145495
chr16 1295594 1295609 TFAP2C JASPAR yes 9145496
chr16 1295594 1295609 TFAP2A JASPAR yes 49326344
chr16 1295594 1295609 TFAP2C JASPAR yes 49326345
chr16 1295595 1295609 TLX1 JASPAR yes 9145497
chr16 1295595 1295609 TLX1 JASPAR yes 49326346
chr16 1295596 1295611 TFAP2A JASPAR yes 9145498
chr16 1295596 1295611 TFAP2C JASPAR yes 9145499
chr16 1295596 1295611 TFAP2A JASPAR yes 49326347
chr16 1295596 1295611 TFAP2C JASPAR yes 49326348
chr16 1295597 1295608 TFAP2A JASPAR yes 9145500
chr16 1295597 1295608 TFAP2B JASPAR yes 9145501
chr16 1295597 1295608 TFAP2C JASPAR yes 9145502
chr16 1295597 1295608 TFAP2A JASPAR yes 49326349
chr16 1295597 1295608 TFAP2B JASPAR yes 49326350
chr16 1295597 1295608 TFAP2C JASPAR yes 49326351
chr16 1295619 1295624 ETS2 TRANSFAC yes 9145503
chr16 1295619 1295624 ETS2 TRANSFAC yes 49326352
chr16 1295619 1295627 EHF JASPAR yes 9145504
chr16 1295619 1295627 EHF JASPAR yes 49326353
chr16 1295625 1295629 LFA1 TRANSFAC yes 9145505
chr16 1295625 1295629 LFA1 TRANSFAC yes 49326354
chr16 1295643 1295654 E2F4 JASPAR yes 9145506
chr16 1295643 1295654 E2F6 JASPAR yes 9145507
chr16 1295643 1295654 E2F4 JASPAR yes 49326355
chr16 1295643 1295654 E2F6 JASPAR yes 49326356
chr16 1295644 1295655 E2F1 JASPAR yes 9145508
chr16 1295644 1295655 E2F1 JASPAR yes 49326357
chr16 1295648 1295653 SP1 TRANSFAC yes 9145509
chr16 1295648 1295653 SP1 TRANSFAC yes 49326358
chr16 1295655 1295675 RREB1 JASPAR yes 9145510
chr16 1295655 1295675 RREB1 JASPAR yes 49326359
chr16 1295656 1295676 RREB1 JASPAR yes 9145511
chr16 1295656 1295676 RREB1 JASPAR yes 49326360
chr16 1295658 1295663 SP1 TRANSFAC yes 9145512
chr16 1295658 1295663 SP1 TRANSFAC yes 49326361
chr16 1295663 1295677 GLIS2 JASPAR yes 9145513
chr16 1295663 1295677 GLIS2 JASPAR yes 49326362
chr16 1295682 1295698 GLIS1 JASPAR yes 9145514
chr16 1295682 1295698 GLIS1 JASPAR yes 49326363
chr16 1295706 1295720 GLIS2 JASPAR yes 9145515
chr16 1295706 1295720 GLIS2 JASPAR yes 49326364
chr16 1295735 1295740 MYC TRANSFAC yes 9145516
chr16 1295735 1295740 MYC TRANSFAC yes 49326365
chr16 1295745 1295751 SP1 TRANSFAC yes 9145517
chr16 1295745 1295751 SP1 TRANSFAC yes 49326366
chr16 1295780 1295790 SP1 JASPAR yes 9145518
chr16 1295780 1295790 SP1 JASPAR yes 49326367
chr16 1295781 1295791 SP1 JASPAR yes 9145519
chr16 1295781 1295791 SP1 JASPAR yes 49326368
chr16 1295783 1295788 SP1 TRANSFAC yes 9145520
chr16 1295783 1295788 SP1 TRANSFAC yes 49326369
chr16 1295796 1295802 YY1 JASPAR yes 9145521
chr16 1295796 1295802 YY1 JASPAR yes 49326370
chr16 1295814 1295829 TFAP2A JASPAR yes 9145522
chr16 1295814 1295829 TFAP2C JASPAR yes 9145523
chr16 1295814 1295829 TFAP2A JASPAR yes 49326371
chr16 1295814 1295829 TFAP2C JASPAR yes 49326372
chr16 1295817 1295828 TFAP2A JASPAR yes 9145524
chr16 1295817 1295828 TFAP2B JASPAR yes 9145525
chr16 1295817 1295828 TFAP2C JASPAR yes 9145526
chr16 1295817 1295828 TFAP2A JASPAR yes 49326373
chr16 1295817 1295828 TFAP2B JASPAR yes 49326374
chr16 1295817 1295828 TFAP2C JASPAR yes 49326375
chr16 1295840 1295845 MYC TRANSFAC yes 9145527
chr16 1295840 1295845 MYC TRANSFAC yes 49326376
chr16 1295850 1295856 SP1 TRANSFAC yes 9145528
chr16 1295850 1295856 SP1 TRANSFAC yes 49326377
chr16 1295856 1295877 REST JASPAR yes 9145529
chr16 1295856 1295877 REST JASPAR yes 49326378
chr16 1295885 1295890 ETS2 TRANSFAC yes 9145530
chr16 1295885 1295890 ETS2 TRANSFAC yes 49326379
chr16 1295885 1295893 FEV JASPAR yes 9145531
chr16 1295885 1295893 FEV JASPAR yes 49326380
chr16 1295886 1295893 SPI1 JASPAR yes 9145532
chr16 1295886 1295893 SPI1 JASPAR yes 49326381
chr16 1295886 1295899 NFKB1 JASPAR yes 9145533
chr16 1295886 1295899 NFKB1 JASPAR yes 49326382
chr16 1295887 1295897 NFKB1 JASPAR yes 9145534
chr16 1295887 1295897 REL JASPAR yes 9145535
chr16 1295887 1295897 NFKB1 JASPAR yes 49326383
chr16 1295887 1295897 REL JASPAR yes 49326384
chr16 1295887 1295898 NFKB1 JASPAR yes 9145536
chr16 1295887 1295898 NFKB1 JASPAR yes 49326385
chr16 1295903 1295923 RREB1 JASPAR yes 9145537
chr16 1295903 1295923 RREB1 JASPAR yes 49326386
chr16 1295904 1295914 TCF4 JASPAR yes 9145538
chr16 1295904 1295914 TCF4 JASPAR yes 49326387
chr16 1295906 1295915 ZEB1 JASPAR yes 9145539
chr16 1295906 1295915 ZEB1 JASPAR yes 49326388
chr16 1295908 1295913 SP1 TRANSFAC yes 9145540
chr16 1295908 1295913 SP1 TRANSFAC yes 49326389
chr16 1295917 1295930 NFKB1 JASPAR yes 9145541
chr16 1295917 1295930 NFKB1 JASPAR yes 49326390
chr16 1295933 1295943 SP1 JASPAR yes 9145542
chr16 1295933 1295943 SP1 JASPAR yes 49326391
chr16 1295950 1295956 MAZ TRANSFAC yes 9145543
chr16 1295950 1295956 MAZ TRANSFAC yes 49326392
chr16 1295963 1295967 YY1 TRANSFAC yes 9145544
chr16 1295963 1295967 YY1 TRANSFAC yes 49326393
chr16 1295966 1295970 YY1 TRANSFAC yes 9145545
chr16 1295966 1295970 YY1 TRANSFAC yes 49326394
SNP sites on vista21543[chr16:1295489-1295973]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 1295555 rs116005520 A C,G no 4254738
chr16 1295583 rs146514010 G A
ATF1
4254739
chr16 1295638 rs4984777 A G no 4254740
chr16 1295670 rs187532603 G A,T
GLIS2 RREB1
4254741
chr16 1295727 rs187891332 C T no 4254742
chr16 1295757 rs530189959 C T no 4254743
chr16 1295758 rs550434138 A G no 4254744
chr16 1295790 rs113512255 G A,T
SP1
4254745
chr16 1295793 rs35375463 G A no 4254746
chr16 1295818 rs8051930 T A,C
TFAP2A TFAP2B TFAP2C
4254747
chr16 1295819 rs553723373 G A
TFAP2A TFAP2B TFAP2C
4254748
chr16 1295820 rs567276737 C G
TFAP2A TFAP2B TFAP2C
4254749
chr16 1295828 rs8045644 G A
TFAP2A TFAP2B TFAP2C
4254750
chr16 1295885 rs138499998 G A
ETS2 FEV
4254751
chr16 1295926 rs80304349 C T
NFKB1
4254752
chr16 1295952 rs541093358 G C
MAZ
4254753
Genes possibly regulated by vista21543[chr16:1295489-1295973]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 1203241 1271771 + CACNA1H ENSG00000196557.6 1203241 0.87 1.0 14379 7752
chr16 1271651 1275257 - TPSG1 ENSG00000116176.6 1275257 0.91 1.0 14380 79768
chr16 1290697 1292555 + TPSAB1 ENSG00000172236.12 1290697 0.87 1.0 14381 95208
chr16 1306060 1308532 + TPSD1 ENSG00000095917.9 1306060 0.89 1.0 14382 89913
chr16 1355548 1377019 + UBE2I ENSG00000103275.14 1355548 0.82 1.0 14383 40425
chr16 1383602 1399439 + BAIAP3 ENSG00000007516.9 1383602 0.81 1.0 14384 12371
Expression level of Genes
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miRNAs possibly regulated by vista21543[chr16:1295489-1295973]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results