EnhancerDB
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  3. vista21548[chr16:1349375-1349723]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21548[chr16:1349375-1349723]
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Tissue distribution of vista21548
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Transcription factor that possibly regulate vista21548[chr16:1349375-1349723]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 1349515 1349779 USF1 UCSC Txn Factor no Conserved 108171425
chr16 1349375 1349380 TFAP2A TRANSFAC yes 9150134
chr16 1349375 1349380 TFAP2A TRANSFAC yes 49326615
chr16 1349375 1349381 MZF1 JASPAR yes 9150135
chr16 1349375 1349381 MZF1 JASPAR yes 49326616
chr16 1349392 1349408 NFYA JASPAR yes 9150136
chr16 1349392 1349408 NFYA JASPAR yes 49326617
chr16 1349397 1349401 H1TF2 TRANSFAC yes 9150137
chr16 1349397 1349401 NFE TRANSFAC yes 9150138
chr16 1349397 1349401 SRF TRANSFAC yes 9150139
chr16 1349397 1349401 H1TF2 TRANSFAC yes 49326618
chr16 1349397 1349401 NFE TRANSFAC yes 49326619
chr16 1349397 1349401 SRF TRANSFAC yes 49326620
chr16 1349447 1349462 HNF4A JASPAR yes 9150140
chr16 1349447 1349462 HNF4A JASPAR yes 49326621
chr16 1349448 1349452 H4TF2 TRANSFAC yes 9150141
chr16 1349448 1349452 H4TF2 TRANSFAC yes 49326622
chr16 1349480 1349484 H4TF2 TRANSFAC yes 9150142
chr16 1349480 1349484 H4TF2 TRANSFAC yes 49326623
chr16 1349487 1349491 NFE TRANSFAC yes 9150143
chr16 1349487 1349491 NFE TRANSFAC yes 49326624
chr16 1349487 1349500 SMAD2 JASPAR yes 9150144
chr16 1349487 1349500 SMAD2 JASPAR yes 49326625
chr16 1349491 1349495 NFE TRANSFAC yes 9150145
chr16 1349491 1349495 NFE TRANSFAC yes 49326626
chr16 1349491 1349506 TFAP2A JASPAR yes 9150146
chr16 1349491 1349506 TFAP2C JASPAR yes 9150147
chr16 1349491 1349506 TFAP2A JASPAR yes 49326627
chr16 1349491 1349506 TFAP2C JASPAR yes 49326628
chr16 1349494 1349505 EBF1 JASPAR yes 9150148
chr16 1349494 1349505 EBF1 JASPAR yes 49326629
chr16 1349494 1349506 TFAP2A JASPAR yes 9150149
chr16 1349494 1349506 TFAP2B JASPAR yes 9150150
chr16 1349494 1349506 TFAP2C JASPAR yes 9150151
chr16 1349494 1349506 TFAP2A JASPAR yes 49326630
chr16 1349494 1349506 TFAP2B JASPAR yes 49326631
chr16 1349494 1349506 TFAP2C JASPAR yes 49326632
chr16 1349494 1349508 PLAG1 JASPAR yes 9150152
chr16 1349494 1349508 PLAG1 JASPAR yes 49326633
chr16 1349494 1349515 ZNF263 JASPAR yes 9150153
chr16 1349494 1349515 ZNF263 JASPAR yes 49326634
chr16 1349496 1349505 TFAP2A JASPAR yes 9150154
chr16 1349496 1349505 TFAP2A JASPAR yes 49326635
chr16 1349502 1349513 E2F6 JASPAR yes 9150155
chr16 1349502 1349513 E2F6 JASPAR yes 49326636
chr16 1349506 1349527 ZNF263 JASPAR yes 9150156
chr16 1349506 1349527 ZNF263 JASPAR yes 49326637
chr16 1349508 1349518 SP1 JASPAR yes 9150157
chr16 1349508 1349518 SP1 JASPAR yes 49326638
chr16 1349511 1349521 SP1 JASPAR yes 9150158
chr16 1349511 1349521 SP1 JASPAR yes 49326639
chr16 1349527 1349542 ZIC4 JASPAR yes 9150159
chr16 1349527 1349542 ZIC4 JASPAR yes 49326640
chr16 1349528 1349542 ZIC1 JASPAR yes 9150160
chr16 1349528 1349542 ZIC1 JASPAR yes 49326641
chr16 1349537 1349543 NFE2 TRANSFAC yes 9150161
chr16 1349537 1349543 NFE2 TRANSFAC yes 49326642
chr16 1349539 1349558 PAX5 JASPAR yes 9150162
chr16 1349539 1349558 PAX5 JASPAR yes 49326643
chr16 1349563 1349576 NFKB2 JASPAR yes 9150163
chr16 1349563 1349576 NFKB2 JASPAR yes 49326644
chr16 1349565 1349569 ESR1 TRANSFAC yes 9150164
chr16 1349565 1349569 ESR1 TRANSFAC yes 49326645
chr16 1349568 1349582 GLIS2 JASPAR yes 9150165
chr16 1349568 1349582 GLIS2 JASPAR yes 49326646
chr16 1349568 1349589 ZNF263 JASPAR yes 9150166
chr16 1349568 1349589 ZNF263 JASPAR yes 49326647
chr16 1349569 1349589 RREB1 JASPAR yes 9150167
chr16 1349569 1349589 RREB1 JASPAR yes 49326648
chr16 1349570 1349580 ZNF740 JASPAR yes 9150168
chr16 1349570 1349580 ZNF740 JASPAR yes 49326649
chr16 1349572 1349582 SP1 JASPAR yes 9150169
chr16 1349572 1349582 SP1 JASPAR yes 49326650
chr16 1349590 1349601 E2F6 JASPAR yes 9150170
chr16 1349590 1349601 E2F6 JASPAR yes 49326651
chr16 1349591 1349596 SP1 TRANSFAC yes 9150171
chr16 1349591 1349596 SP1 TRANSFAC yes 49326652
chr16 1349628 1349639 USF1 JASPAR yes 9150172
chr16 1349628 1349639 USF2 JASPAR yes 9150173
chr16 1349628 1349639 USF1 JASPAR yes 49326653
chr16 1349628 1349639 USF2 JASPAR yes 49326654
chr16 1349633 1349647 RORA JASPAR yes 9150174
chr16 1349633 1349647 RORA JASPAR yes 49326655
chr16 1349646 1349650 YY1 TRANSFAC yes 9150175
chr16 1349646 1349650 YY1 TRANSFAC yes 49326656
chr16 1349646 1349657 CEBPB JASPAR yes 9150176
chr16 1349646 1349657 CEBPB JASPAR yes 49326657
chr16 1349649 1349663 XBP1 JASPAR yes 9150177
chr16 1349649 1349663 XBP1 JASPAR yes 49326658
chr16 1349655 1349660 ATF1 TRANSFAC yes 9150178
chr16 1349655 1349660 ATF1 TRANSFAC yes 49326659
chr16 1349679 1349694 NR2C2 JASPAR yes 49326660
chr16 1349680 1349694 RXRB JASPAR yes 49326661
chr16 1349680 1349694 RXRG JASPAR yes 49326662
chr16 1349682 1349686 LFA1 TRANSFAC yes 49326663
chr16 1349694 1349715 IRF1 JASPAR yes 49326664
chr16 1349699 1349714 FOXP1 JASPAR yes 49326665
chr16 1349699 1349714 LEF1 JASPAR yes 49326666
chr16 1349699 1349720 IRF1 JASPAR yes 49326667
chr16 1349700 1349721 IRF1 JASPAR yes 49326668
chr16 1349701 1349716 FOXP1 JASPAR yes 49326669
chr16 1349701 1349722 IRF1 JASPAR yes 49326670
chr16 1349706 1349721 FOXP1 JASPAR yes 49326671
chr16 1349707 1349722 STAT2 JASPAR yes 49326672
SNP sites on vista21548[chr16:1349375-1349723]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 1349396 rs543242136 G A
NFYA
4255609
chr16 1349440 rs183893171 T C no 4255610
chr16 1349528 rs144282065 G A
USF1 ZIC1 ZIC4
4255611
chr16 1349564 rs34019514 C T
NFKB2 USF1
4255612
chr16 1349570 rs201226832 A AC
GLIS2 NFKB2 RREB1 USF1 ZNF263 ZNF740
4255613
chr16 1349602 rs80018191 C A
USF1
4255614
chr16 1349618 rs144086770 G A
USF1
4255615
chr16 1349659 rs8047143 T G
ATF1 USF1 XBP1
4255616
chr16 1349669 rs146524516 C T
USF1
4255617
chr16 1349696 rs139949164 A G
IRF1 USF1
4255618
chr16 1349711 rs60036035 CT C
FOXP1 IRF1 LEF1 STAT2 USF1
4255619
chr16 1349711 rs796612976 CT C
FOXP1 IRF1 LEF1 STAT2 USF1
4255620
chr16 1349721 rs199777399 T C
FOXP1 IRF1 STAT2 USF1
4255621
Genes possibly regulated by vista21548[chr16:1349375-1349723]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 1271651 1275257 - TPSG1 ENSG00000116176.6 1275257 0.91 1.0 14380 25882
chr16 1290697 1292555 + TPSAB1 ENSG00000172236.12 1290697 0.87 1.0 14381 41322
chr16 1306060 1308532 + TPSD1 ENSG00000095917.9 1306060 0.89 1.0 14382 56685
chr16 1355548 1377019 + UBE2I ENSG00000103275.14 1355548 0.82 1.0 14383 94175
chr16 1383602 1399439 + BAIAP3 ENSG00000007516.9 1383602 0.81 1.0 14384 66121
chr16 1399241 1401912 - TSR3 ENSG00000007520.3 1401912 0.5 0.99 14385 47811
chr16 1401924 1413352 + GNPTG ENSG00000090581.5 1401924 0.69 1.0 14386 47799
Expression level of Genes
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miRNAs possibly regulated by vista21548[chr16:1349375-1349723]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results