EnhancerDB
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  3. vista21558[chr16:1943342-1943511]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21558[chr16:1943342-1943511]
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Tissue distribution of vista21558
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Transcription factor that possibly regulate vista21558[chr16:1943342-1943511]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 1943345 1943358 POU3F3 JASPAR yes 9164183
chr16 1943345 1943358 POU3F3 JASPAR yes 49327042
chr16 1943355 1943360 USF2 TRANSFAC yes 9164184
chr16 1943355 1943360 USF2 TRANSFAC yes 49327043
chr16 1943370 1943384 ZIC1 JASPAR yes 9164185
chr16 1943370 1943384 ZIC1 JASPAR yes 49327044
chr16 1943370 1943385 ZIC4 JASPAR yes 9164186
chr16 1943370 1943385 ZIC4 JASPAR yes 49327045
chr16 1943378 1943391 EOMES JASPAR yes 9164187
chr16 1943378 1943391 EOMES JASPAR yes 49327046
chr16 1943379 1943383 NFE TRANSFAC yes 9164188
chr16 1943379 1943383 NFE TRANSFAC yes 49327047
chr16 1943380 1943390 TBR1 JASPAR yes 9164189
chr16 1943380 1943390 TBR1 JASPAR yes 49327048
chr16 1943380 1943391 TBX2 JASPAR yes 9164190
chr16 1943380 1943391 TBX2 JASPAR yes 49327049
chr16 1943382 1943390 MGA JASPAR yes 9164191
chr16 1943382 1943390 TBX15 JASPAR yes 9164192
chr16 1943382 1943390 TBX1 JASPAR yes 9164193
chr16 1943382 1943390 TBX4 JASPAR yes 9164194
chr16 1943382 1943390 TBX5 JASPAR yes 9164195
chr16 1943382 1943390 MGA JASPAR yes 49327050
chr16 1943382 1943390 TBX15 JASPAR yes 49327051
chr16 1943382 1943390 TBX1 JASPAR yes 49327052
chr16 1943382 1943390 TBX4 JASPAR yes 49327053
chr16 1943382 1943390 TBX5 JASPAR yes 49327054
chr16 1943394 1943398 H1TF2 TRANSFAC yes 9164196
chr16 1943394 1943398 NFE TRANSFAC yes 9164197
chr16 1943394 1943398 SRF TRANSFAC yes 9164198
chr16 1943394 1943398 H1TF2 TRANSFAC yes 49327055
chr16 1943394 1943398 NFE TRANSFAC yes 49327056
chr16 1943394 1943398 SRF TRANSFAC yes 49327057
chr16 1943394 1943400 NFYC TRANSFAC yes 9164199
chr16 1943394 1943400 NFYC TRANSFAC yes 49327058
chr16 1943438 1943452 RORA JASPAR yes 9164200
chr16 1943438 1943452 RORA JASPAR yes 49327059
chr16 1943441 1943451 RORA JASPAR yes 9164201
chr16 1943441 1943451 RORA JASPAR yes 49327060
chr16 1943445 1943460 SCRT1 JASPAR yes 9164202
chr16 1943445 1943460 SCRT1 JASPAR yes 49327061
chr16 1943446 1943450 ESR1 TRANSFAC yes 9164203
chr16 1943446 1943450 ESR1 TRANSFAC yes 49327062
chr16 1943448 1943460 PKNOX1 JASPAR yes 9164204
chr16 1943448 1943460 PKNOX2 JASPAR yes 9164205
chr16 1943448 1943460 TGIF1 JASPAR yes 9164206
chr16 1943448 1943460 TGIF2 JASPAR yes 9164207
chr16 1943448 1943460 PKNOX1 JASPAR yes 49327063
chr16 1943448 1943460 PKNOX2 JASPAR yes 49327064
chr16 1943448 1943460 TGIF1 JASPAR yes 49327065
chr16 1943448 1943460 TGIF2 JASPAR yes 49327066
chr16 1943449 1943458 SNAI2 JASPAR yes 9164208
chr16 1943449 1943458 SNAI2 JASPAR yes 49327067
chr16 1943449 1943459 ID4 JASPAR yes 9164209
chr16 1943449 1943459 MSC JASPAR yes 9164210
chr16 1943449 1943459 TCF3 JASPAR yes 9164211
chr16 1943449 1943459 ID4 JASPAR yes 49327068
chr16 1943449 1943459 MSC JASPAR yes 49327069
chr16 1943449 1943459 TCF3 JASPAR yes 49327070
chr16 1943471 1943475 YY1 TRANSFAC yes 9164212
chr16 1943471 1943475 YY1 TRANSFAC yes 49327071
chr16 1943476 1943482 SOX10 JASPAR yes 9164213
chr16 1943476 1943482 SOX10 JASPAR yes 49327072
chr16 1943504 1943516 GRHL1 JASPAR yes 9164214
chr16 1943504 1943516 GRHL1 JASPAR yes 49327073
chr16 1943505 1943515 TFCP2 JASPAR yes 9164215
chr16 1943505 1943515 TFCP2 JASPAR yes 49327074
chr16 1943509 1943514 MYC TRANSFAC yes 9164216
chr16 1943509 1943514 MYC TRANSFAC yes 49327075
SNP sites on vista21558[chr16:1943342-1943511]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 1943418 rs2575337 A G no 4258333
chr16 1943433 rs556632361 C T no 4258334
chr16 1943434 rs79492839 G A,C no 4258335
chr16 1943482 rs75043894 G C
SOX10
4258336
Genes possibly regulated by vista21558[chr16:1943342-1943511]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 1826713 1843701 - SPSB3 ENSG00000162032.11 1843701 0.6 1.0 14402 359
chr16 1840414 1844972 - IGFALS ENSG00000099769.5 1844972 0.99 0.99 14404 1630
chr16 1845621 1877195 - HAGH ENSG00000063854.8 1877195 0.8 1.0 14405 33853
chr16 1876968 1890208 + FAHD1 ENSG00000180185.7 1876968 0.79 0.99 14406 33626
chr16 1883984 1934295 - MEIOB ENSG00000162039.10 1934295 0.94 0.98 14407 90953
chr16 1961464 1968441 - HS3ST6 ENSG00000162040.5 1968441 0.96 1.0 14408 75070
chr16 1988211 1993327 - MSRB1 ENSG00000198736.7 1993327 0.87 0.99 14409 50184
chr16 1993975 2007607 - RPL3L ENSG00000140986.7 2007607 1.0 0.97 14410 35904
chr16 2009509 2011976 + NDUFB10 ENSG00000140990.10 2009509 0.64 1.0 14411 34002
chr16 2012053 2014861 - RPS2 ENSG00000140988.11 2014861 0.71 1.0 14412 28650
chr16 2016824 2018976 + RNF151 ENSG00000179580.5 2016824 0.87 1.0 14413 26687
chr16 2022038 2032934 + TBL3 ENSG00000183751.10 2022038 0.71 1.0 14414 21473
chr16 2028918 2034193 - NOXO1 ENSG00000196408.7 2034193 0.95 1.0 14415 9318
chr16 2031633 2032918 + AC005606.1 ENSG00000269205.1 2031633 0.95 0.98 14416 11878
chr16 2034208 2037750 + GFER ENSG00000127554.12 2034208 0.74 1.0 14417 9303
chr16 2039661 2044276 + SYNGR3 ENSG00000127561.10 2039661 0.87 1.0 14418 3850
Expression level of Genes
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miRNAs possibly regulated by vista21558[chr16:1943342-1943511]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results