EnhancerDB
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  3. vista21560[chr16:1979729-1980160]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21560[chr16:1979729-1980160]
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Tissue distribution of vista21560
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Transcription factor that possibly regulate vista21560[chr16:1979729-1980160]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 1979265 1980271 POLR2A UCSC Txn Factor no Conserved 108171901
chr16 1979445 1979812 PHF8 UCSC Txn Factor no Conserved 108171908
chr16 1979549 1980050 CTCF UCSC Txn Factor no Conserved 108171920
chr16 1979581 1980202 MAX UCSC Txn Factor no Conserved 108171925
chr16 1979621 1980182 E2F6 UCSC Txn Factor no Conserved 108171935
chr16 1979637 1979976 NRF1 UCSC Txn Factor no Conserved 108171944
chr16 1979682 1979986 RAD21 UCSC Txn Factor no Conserved 108171960
chr16 1979686 1980016 ZNF143 UCSC Txn Factor no Conserved 108171963
chr16 1979687 1980119 MYC UCSC Txn Factor no Conserved 108171965
chr16 1979731 1980001 SMC3 UCSC Txn Factor no Conserved 108171995
chr16 1979731 1979736 SP1 TRANSFAC yes 9166300
chr16 1979731 1979736 SP1 TRANSFAC yes 49327116
chr16 1979743 1979754 NRF1 JASPAR yes 9166301
chr16 1979743 1979754 NRF1 JASPAR yes 49327117
chr16 1979744 1979756 HINFP JASPAR yes 9166302
chr16 1979744 1979756 HINFP JASPAR yes 49327118
chr16 1979768 1979780 ZBTB7B JASPAR yes 9166303
chr16 1979768 1979780 ZBTB7C JASPAR yes 9166304
chr16 1979768 1979780 ZBTB7B JASPAR yes 49327119
chr16 1979768 1979780 ZBTB7C JASPAR yes 49327120
chr16 1979769 1979783 ZIC1 JASPAR yes 9166305
chr16 1979769 1979783 ZIC1 JASPAR yes 49327121
chr16 1979769 1979784 ZIC3 JASPAR yes 9166306
chr16 1979769 1979784 ZIC4 JASPAR yes 9166307
chr16 1979769 1979784 ZIC3 JASPAR yes 49327122
chr16 1979769 1979784 ZIC4 JASPAR yes 49327123
chr16 1979772 1979784 TFAP2A JASPAR yes 9166308
chr16 1979772 1979784 TFAP2A JASPAR yes 49327124
chr16 1979773 1979782 TFAP2A JASPAR yes 9166309
chr16 1979773 1979782 TFAP2A JASPAR yes 49327125
chr16 1979777 1979789 GLI2 JASPAR yes 9166310
chr16 1979777 1979789 GLI2 JASPAR yes 49327126
chr16 1979807 1979821 GLIS2 JASPAR yes 9166311
chr16 1979807 1979821 GLIS3 JASPAR yes 9166312
chr16 1979807 1979821 ZIC1 JASPAR yes 9166313
chr16 1979807 1979821 GLIS2 JASPAR yes 49327127
chr16 1979807 1979821 GLIS3 JASPAR yes 49327128
chr16 1979807 1979821 ZIC1 JASPAR yes 49327129
chr16 1979807 1979822 ZIC3 JASPAR yes 9166314
chr16 1979807 1979822 ZIC4 JASPAR yes 9166315
chr16 1979807 1979822 ZIC3 JASPAR yes 49327130
chr16 1979807 1979822 ZIC4 JASPAR yes 49327131
chr16 1979811 1979817 SP1 TRANSFAC yes 9166316
chr16 1979811 1979817 SP1 TRANSFAC yes 49327132
chr16 1979817 1979828 NRF1 JASPAR yes 9166317
chr16 1979817 1979828 NRF1 JASPAR yes 49327133
chr16 1979818 1979829 NRF1 JASPAR yes 9166318
chr16 1979818 1979829 NRF1 JASPAR yes 49327134
chr16 1979861 1979880 CTCF JASPAR yes 9166319
chr16 1979861 1979880 CTCF JASPAR yes 49327135
chr16 1979864 1979878 ZIC1 JASPAR yes 9166320
chr16 1979864 1979878 ZIC1 JASPAR yes 49327136
chr16 1979864 1979879 ZIC3 JASPAR yes 9166321
chr16 1979864 1979879 ZIC4 JASPAR yes 9166322
chr16 1979864 1979879 ZIC3 JASPAR yes 49327137
chr16 1979864 1979879 ZIC4 JASPAR yes 49327138
chr16 1979875 1979879 ESR1 TRANSFAC yes 9166323
chr16 1979875 1979879 ESR1 TRANSFAC yes 49327139
chr16 1979884 1979895 NRF1 JASPAR yes 9166324
chr16 1979884 1979895 NRF1 JASPAR yes 49327140
chr16 1979891 1979895 H4TF2 TRANSFAC yes 9166325
chr16 1979891 1979895 H4TF2 TRANSFAC yes 49327141
chr16 1979916 1979929 TFAP2A JASPAR yes 9166326
chr16 1979916 1979929 TFAP2B JASPAR yes 9166327
chr16 1979916 1979929 TFAP2C JASPAR yes 9166328
chr16 1979916 1979929 TFAP2A JASPAR yes 49327142
chr16 1979916 1979929 TFAP2B JASPAR yes 49327143
chr16 1979916 1979929 TFAP2C JASPAR yes 49327144
chr16 1979935 1979945 HEY1 JASPAR yes 9166329
chr16 1979935 1979945 HEY2 JASPAR yes 9166330
chr16 1979935 1979945 MAX JASPAR yes 9166331
chr16 1979935 1979945 MNT JASPAR yes 9166332
chr16 1979935 1979945 HEY1 JASPAR yes 49327145
chr16 1979935 1979945 HEY2 JASPAR yes 49327146
chr16 1979935 1979945 MAX JASPAR yes 49327147
chr16 1979935 1979945 MNT JASPAR yes 49327148
chr16 1979936 1979946 MAX JASPAR yes 9166333
chr16 1979936 1979946 MAX JASPAR yes 49327149
chr16 1979937 1979942 MYC TRANSFAC yes 9166334
chr16 1979937 1979942 USF1 TRANSFAC yes 9166335
chr16 1979937 1979942 USF2 TRANSFAC yes 9166336
chr16 1979937 1979942 MYC TRANSFAC yes 49327150
chr16 1979937 1979942 USF1 TRANSFAC yes 49327151
chr16 1979937 1979942 USF2 TRANSFAC yes 49327152
chr16 1979937 1979944 USF1 JASPAR yes 9166337
chr16 1979937 1979944 USF1 JASPAR yes 49327153
chr16 1979971 1979976 SP1 TRANSFAC yes 9166338
chr16 1979971 1979976 SP1 TRANSFAC yes 49327154
chr16 1979975 1979981 SP1 TRANSFAC yes 9166339
chr16 1979975 1979981 SP1 TRANSFAC yes 49327155
chr16 1979975 1979985 SP1 JASPAR yes 9166340
chr16 1979975 1979985 SP1 JASPAR yes 49327156
chr16 1979978 1979988 SP1 JASPAR yes 9166341
chr16 1979978 1979988 SP1 JASPAR yes 49327157
chr16 1979979 1979990 E2F6 JASPAR yes 9166342
chr16 1979979 1979990 E2F6 JASPAR yes 49327158
chr16 1979982 1979990 TBX15 JASPAR yes 9166343
chr16 1979982 1979990 TBX15 JASPAR yes 49327159
chr16 1979982 1979991 ZEB1 JASPAR yes 9166344
chr16 1979982 1979991 ZEB1 JASPAR yes 49327160
chr16 1979983 1979993 TCF4 JASPAR yes 9166345
chr16 1979983 1979993 TCF4 JASPAR yes 49327161
chr16 1979984 1979993 SNAI2 JASPAR yes 9166346
chr16 1979984 1979993 SNAI2 JASPAR yes 49327162
chr16 1979985 1979990 USF2 TRANSFAC yes 9166347
chr16 1979985 1979990 USF2 TRANSFAC yes 49327163
chr16 1980020 1980041 REST JASPAR yes 9166348
chr16 1980020 1980041 REST JASPAR yes 49327164
chr16 1980035 1980045 SP1 JASPAR yes 9166349
chr16 1980035 1980045 SP1 JASPAR yes 49327165
chr16 1980037 1980047 ZNF740 JASPAR yes 9166350
chr16 1980037 1980047 ZNF740 JASPAR yes 49327166
chr16 1980040 1980059 CTCF JASPAR yes 9166351
chr16 1980040 1980059 CTCF JASPAR yes 49327167
chr16 1980049 1980054 SP1 TRANSFAC yes 9166352
chr16 1980049 1980054 SP1 TRANSFAC yes 49327168
chr16 1980082 1980094 HES5 JASPAR yes 9166353
chr16 1980082 1980094 HES7 JASPAR yes 9166354
chr16 1980082 1980094 PKNOX1 JASPAR yes 9166355
chr16 1980082 1980094 PKNOX2 JASPAR yes 9166356
chr16 1980082 1980094 TGIF2 JASPAR yes 9166357
chr16 1980082 1980094 HES5 JASPAR yes 49327169
chr16 1980082 1980094 HES7 JASPAR yes 49327170
chr16 1980082 1980094 PKNOX1 JASPAR yes 49327171
chr16 1980082 1980094 PKNOX2 JASPAR yes 49327172
chr16 1980082 1980094 TGIF2 JASPAR yes 49327173
chr16 1980083 1980093 HEY2 JASPAR yes 9166358
chr16 1980083 1980093 ID4 JASPAR yes 9166359
chr16 1980083 1980093 TCF4 JASPAR yes 9166360
chr16 1980083 1980093 HEY2 JASPAR yes 49327174
chr16 1980083 1980093 ID4 JASPAR yes 49327175
chr16 1980083 1980093 TCF4 JASPAR yes 49327176
chr16 1980084 1980093 SNAI2 JASPAR yes 9166361
chr16 1980084 1980093 SNAI2 JASPAR yes 49327177
chr16 1980085 1980090 USF2 TRANSFAC yes 9166362
chr16 1980085 1980090 USF2 TRANSFAC yes 49327178
chr16 1980103 1980109 ETS1 JASPAR yes 9166363
chr16 1980103 1980109 ETS1 JASPAR yes 49327179
chr16 1980108 1980120 ZBTB7B JASPAR yes 9166364
chr16 1980108 1980120 ZBTB7C JASPAR yes 9166365
chr16 1980108 1980120 ZBTB7B JASPAR yes 49327180
chr16 1980108 1980120 ZBTB7C JASPAR yes 49327181
chr16 1980109 1980121 ZBTB7A JASPAR yes 9166366
chr16 1980109 1980121 ZBTB7A JASPAR yes 49327182
chr16 1980144 1980154 MZF1 JASPAR yes 9166367
chr16 1980144 1980154 MZF1 JASPAR yes 49327183
SNP sites on vista21560[chr16:1979729-1980160]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 1979768 rs139301750 C T
CTCF E2F6 MAX MYC NRF1 PHF8 POLR2A RAD21 SMC3 ZBTB7B ZBTB7C ZNF143
4258953
chr16 1979772 rs529759732 AC A
CTCF E2F6 MAX MYC NRF1 PHF8 POLR2A RAD21 SMC3 TFAP2A ZBTB7B ZBTB7C ZIC1 ZIC3 ZIC4 ZNF143
4258954
chr16 1979777 rs569813776 C G
CTCF E2F6 GLI2 MAX MYC NRF1 PHF8 POLR2A RAD21 SMC3 TFAP2A ZBTB7B ZBTB7C ZIC1 ZIC3 ZIC4 ZNF143
4258955
chr16 1979795 rs532376374 T A
CTCF E2F6 MAX MYC NRF1 PHF8 POLR2A RAD21 SMC3 ZNF143
4258956
chr16 1979831 rs758191 G T
CTCF E2F6 MAX MYC NRF1 POLR2A RAD21 SMC3 ZNF143
4258957
chr16 1979855 rs758192 C G
CTCF E2F6 MAX MYC NRF1 POLR2A RAD21 SMC3 ZNF143
4258958
chr16 1979943 rs117692722 G T
CTCF E2F6 HEY1 HEY2 MAX MNT MYC NRF1 POLR2A RAD21 SMC3 USF1 ZNF143
4258959
chr16 1979995 rs758193 A G
CTCF E2F6 MAX MYC POLR2A SMC3 ZNF143
4258960
chr16 1980027 rs911395 G T
CTCF E2F6 MAX MYC POLR2A REST
4258961
Genes possibly regulated by vista21560[chr16:1979729-1980160]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 1883984 1934295 - MEIOB ENSG00000162039.10 1934295 0.94 0.98 14407 54566
chr16 1961464 1968441 - HS3ST6 ENSG00000162040.5 1968441 0.96 1.0 14408 88712
chr16 1988211 1993327 - MSRB1 ENSG00000198736.7 1993327 0.87 0.99 14409 86833
chr16 1993975 2007607 - RPL3L ENSG00000140986.7 2007607 1.0 0.97 14410 72553
chr16 2009509 2011976 + NDUFB10 ENSG00000140990.10 2009509 0.64 1.0 14411 70651
chr16 2012053 2014861 - RPS2 ENSG00000140988.11 2014861 0.71 1.0 14412 65299
chr16 2016824 2018976 + RNF151 ENSG00000179580.5 2016824 0.87 1.0 14413 63336
chr16 2022038 2032934 + TBL3 ENSG00000183751.10 2022038 0.71 1.0 14414 58122
chr16 2028918 2034193 - NOXO1 ENSG00000196408.7 2034193 0.95 1.0 14415 45967
chr16 2031633 2032918 + AC005606.1 ENSG00000269205.1 2031633 0.95 0.98 14416 48527
chr16 2034208 2037750 + GFER ENSG00000127554.12 2034208 0.74 1.0 14417 45952
chr16 2039661 2044276 + SYNGR3 ENSG00000127561.10 2039661 0.87 1.0 14418 40499
chr16 2047655 2059824 - ZNF598 ENSG00000167962.8 2059824 0.57 1.0 14419 20336
chr16 2059927 2070756 + NPW ENSG00000183971.5 2059927 0.96 1.0 14420 20233
chr16 2075357 2089027 + SLC9A3R2 ENSG00000065054.9 2075357 0.8 0.99 14421 4803
Expression level of Genes
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miRNAs possibly regulated by vista21560[chr16:1979729-1980160]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results