EnhancerDB
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  3. vista21572[chr16:2478608-2478672]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21572[chr16:2478608-2478672]
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Tissue distribution of vista21572
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Transcription factor that possibly regulate vista21572[chr16:2478608-2478672]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 2478432 2478884 CTCF UCSC Txn Factor no Conserved 108172388
chr16 2478443 2479449 MAX UCSC Txn Factor no Conserved 108172390
chr16 2478461 2479806 POLR2A UCSC Txn Factor no Conserved 108172392
chr16 2478617 2479243 PHF8 UCSC Txn Factor no Conserved 108172407
chr16 2478612 2478633 ZNF263 JASPAR yes 49327783
chr16 2478617 2478634 RARA JASPAR yes 49327784
chr16 2478629 2478633 LFA1 TRANSFAC yes 49327785
chr16 2478632 2478645 ZBTB18 JASPAR yes 49327786
chr16 2478634 2478655 REST JASPAR yes 49327787
chr16 2478635 2478654 REST JASPAR yes 49327788
chr16 2478648 2478658 MZF1 JASPAR yes 49327789
chr16 2478651 2478656 TFAP2A TRANSFAC yes 49327790
chr16 2478651 2478657 MZF1 JASPAR yes 49327791
chr16 2478653 2478659 MAZ TRANSFAC yes 49327792
chr16 2478663 2478672 TFAP2A JASPAR yes 49327793
SNP sites on vista21572[chr16:2478608-2478672]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista21572[chr16:2478608-2478672]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 2325882 2390747 - ABCA3 ENSG00000167972.9 2390747 0.97 0.99 14436 12139
chr16 2479395 2508855 + CCNF ENSG00000162063.8 2479395 0.93 1.0 14437 99277
chr16 2510081 2514964 + C16orf59 ENSG00000162062.10 2510081 0.95 0.99 14438 68591
chr16 2521500 2524146 + NTN3 ENSG00000162068.1 2521500 0.92 0.99 14439 57172
chr16 2525147 2555735 + TBC1D24 ENSG00000162065.7 2525147 0.76 0.99 14440 53525
chr16 2546033 2570219 + RP11-20I23.1 ENSG00000260272.1 2546033 0.9 0.89 14441 32639
chr16 2563871 2570219 + ATP6V0C ENSG00000185883.6 2563871 0.78 0.73 14442 14801
chr16 2563966 2577956 + ATP6C ENSG00000259784.1 2563966 0.99 0.95 14443 14706
chr16 2570358 2581423 + AMDHD2 ENSG00000162066.10 2570358 0.67 0.99 14444 8314
Expression level of Genes
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miRNAs possibly regulated by vista21572[chr16:2478608-2478672]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 2495437 2495458 + hsa-miR-6767-3p MIMAT0027435 2479447 0.033952594490711085 0.916667 0.0 591
Expression level of miRNAs
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