EnhancerDB
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  3. vista21589[chr16:2924940-2925188]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21589[chr16:2924940-2925188]
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Tissue distribution of vista21589
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Transcription factor that possibly regulate vista21589[chr16:2924940-2925188]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 2924847 2925231 CTCF UCSC Txn Factor no Conserved 108173410
chr16 2924880 2925175 SMC3 UCSC Txn Factor no Conserved 108173425
chr16 2924922 2925192 RAD21 UCSC Txn Factor no Conserved 108173441
chr16 2924939 2924944 ETS2 TRANSFAC yes 9195389
chr16 2924939 2924944 ETS2 TRANSFAC yes 49328514
chr16 2924962 2924966 LFA1 TRANSFAC yes 9195390
chr16 2924962 2924966 LFA1 TRANSFAC yes 49328515
chr16 2924971 2924982 SPDEF JASPAR yes 9195391
chr16 2924971 2924982 SPDEF JASPAR yes 49328516
chr16 2924974 2924984 RORA JASPAR yes 9195392
chr16 2924974 2924984 RORA JASPAR yes 49328517
chr16 2924979 2924983 ESR1 TRANSFAC yes 9195393
chr16 2924979 2924983 ESR1 TRANSFAC yes 49328518
chr16 2924995 2925000 TFAP2A TRANSFAC yes 9195394
chr16 2924995 2925000 TFAP2A TRANSFAC yes 49328519
chr16 2924995 2925001 MZF1 JASPAR yes 9195395
chr16 2924995 2925001 MZF1 JASPAR yes 49328520
chr16 2925022 2925041 CTCF JASPAR yes 9195396
chr16 2925022 2925041 CTCF JASPAR yes 49328521
chr16 2925052 2925060 SMAD4 TRANSFAC yes 9195397
chr16 2925052 2925060 SMAD4 TRANSFAC yes 49328522
chr16 2925054 2925059 SP1 TRANSFAC yes 9195398
chr16 2925054 2925059 SP1 TRANSFAC yes 49328523
chr16 2925087 2925106 REST JASPAR yes 9195399
chr16 2925087 2925106 REST JASPAR yes 49328524
chr16 2925099 2925105 SP1 TRANSFAC yes 9195400
chr16 2925099 2925105 SP1 TRANSFAC yes 49328525
chr16 2925100 2925105 SP1 TRANSFAC yes 9195401
chr16 2925100 2925105 SP1 TRANSFAC yes 49328526
chr16 2925135 2925145 MZF1 JASPAR yes 9195402
chr16 2925135 2925145 MZF1 JASPAR yes 49328527
chr16 2925138 2925143 TFAP2A TRANSFAC yes 9195403
chr16 2925138 2925143 TFAP2A TRANSFAC yes 49328528
chr16 2925138 2925144 MZF1 JASPAR yes 9195404
chr16 2925138 2925144 MZF1 JASPAR yes 49328529
chr16 2925143 2925161 MAFF JASPAR yes 9195405
chr16 2925143 2925161 MAFF JASPAR yes 49328530
chr16 2925145 2925156 NRL JASPAR yes 9195406
chr16 2925145 2925156 NRL JASPAR yes 49328531
chr16 2925145 2925160 MAFK JASPAR yes 9195407
chr16 2925145 2925160 MAFK JASPAR yes 49328532
chr16 2925154 2925175 IRF1 JASPAR yes 9195408
chr16 2925154 2925175 IRF1 JASPAR yes 49328533
chr16 2925155 2925176 IRF1 JASPAR yes 9195409
chr16 2925155 2925176 IRF1 JASPAR yes 49328534
chr16 2925156 2925168 FOXC2 JASPAR yes 9195410
chr16 2925156 2925168 FOXC2 JASPAR yes 49328535
chr16 2925157 2925172 FOXP1 JASPAR yes 9195411
chr16 2925157 2925172 FOXP1 JASPAR yes 49328536
chr16 2925157 2925178 IRF1 JASPAR yes 9195412
chr16 2925157 2925178 IRF1 JASPAR yes 49328537
chr16 2925158 2925179 IRF1 JASPAR yes 9195413
chr16 2925158 2925179 IRF1 JASPAR yes 49328538
chr16 2925159 2925174 FOXP1 JASPAR yes 9195414
chr16 2925159 2925174 FOXP1 JASPAR yes 49328539
chr16 2925159 2925180 IRF1 JASPAR yes 9195415
chr16 2925159 2925180 IRF1 JASPAR yes 49328540
chr16 2925160 2925175 FOXP1 JASPAR yes 9195416
chr16 2925160 2925175 FOXP1 JASPAR yes 49328541
chr16 2925160 2925181 IRF1 JASPAR yes 9195417
chr16 2925160 2925181 IRF1 JASPAR yes 49328542
chr16 2925161 2925176 FOXP1 JASPAR yes 9195418
chr16 2925161 2925176 FOXP1 JASPAR yes 49328543
chr16 2925161 2925182 IRF1 JASPAR yes 9195419
chr16 2925161 2925182 IRF1 JASPAR yes 49328544
chr16 2925162 2925177 FOXP1 JASPAR yes 9195420
chr16 2925162 2925177 FOXP1 JASPAR yes 49328545
chr16 2925162 2925183 IRF1 JASPAR yes 9195421
chr16 2925162 2925183 IRF1 JASPAR yes 49328546
chr16 2925163 2925178 FOXP1 JASPAR yes 9195422
chr16 2925163 2925178 FOXP1 JASPAR yes 49328547
chr16 2925163 2925184 IRF1 JASPAR yes 9195423
chr16 2925163 2925184 IRF1 JASPAR yes 49328548
chr16 2925164 2925179 FOXP1 JASPAR yes 9195424
chr16 2925164 2925179 FOXP1 JASPAR yes 49328549
chr16 2925164 2925185 IRF1 JASPAR yes 9195425
chr16 2925164 2925185 IRF1 JASPAR yes 49328550
chr16 2925165 2925180 FOXP1 JASPAR yes 9195426
chr16 2925165 2925180 FOXP1 JASPAR yes 49328551
chr16 2925165 2925186 IRF1 JASPAR yes 9195427
chr16 2925165 2925186 IRF1 JASPAR yes 49328552
chr16 2925166 2925181 FOXP1 JASPAR yes 9195428
chr16 2925166 2925181 FOXP1 JASPAR yes 49328553
chr16 2925166 2925187 IRF1 JASPAR yes 9195429
chr16 2925166 2925187 IRF1 JASPAR yes 49328554
chr16 2925167 2925182 FOXP1 JASPAR yes 9195430
chr16 2925167 2925182 FOXP1 JASPAR yes 49328555
chr16 2925168 2925183 FOXP1 JASPAR yes 9195431
chr16 2925168 2925183 FOXP1 JASPAR yes 49328556
chr16 2925169 2925184 FOXP1 JASPAR yes 9195432
chr16 2925169 2925184 FOXP1 JASPAR yes 49328557
chr16 2925170 2925185 FOXP1 JASPAR yes 9195433
chr16 2925170 2925185 FOXP1 JASPAR yes 49328558
chr16 2925171 2925186 FOXP1 JASPAR yes 9195434
chr16 2925171 2925186 FOXP1 JASPAR yes 49328559
chr16 2925172 2925187 FOXP1 JASPAR yes 9195435
chr16 2925172 2925187 FOXP1 JASPAR yes 49328560
chr16 2925173 2925188 FOXP1 JASPAR yes 9195436
chr16 2925173 2925188 FOXP1 JASPAR yes 49328561
chr16 2925174 2925189 FOXP1 JASPAR yes 9195437
chr16 2925174 2925189 FOXP1 JASPAR yes 49328562
chr16 2925176 2925191 MEF2C JASPAR yes 9195438
chr16 2925176 2925191 MEF2C JASPAR yes 49328563
chr16 2925185 2925188 MYB TRANSFAC yes 9195439
chr16 2925185 2925188 MYB TRANSFAC yes 49328564
SNP sites on vista21589[chr16:2924940-2925188]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 2924949 rs114296504 C G
CTCF RAD21 SMC3
4264664
chr16 2924979 rs79698206 G A
CTCF ESR1 RAD21 RORA SMC3 SPDEF
4264665
chr16 2924988 rs73495048 C G
CTCF RAD21 SMC3
4264666
chr16 2925033 rs561792115 AGGGC A
CTCF RAD21 SMC3
4264667
chr16 2925049 rs117777329 C T
CTCF RAD21 SMC3
4264668
chr16 2925082 rs192120283 A G
CTCF RAD21 SMC3
4264669
chr16 2925089 rs538060772 C T
CTCF RAD21 REST SMC3
4264670
chr16 2925090 rs114946807 G T
CTCF RAD21 REST SMC3
4264671
Genes possibly regulated by vista21589[chr16:2924940-2925188]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 2821415 2827298 - TCEB2 ENSG00000103363.10 2827298 0.6 1.0 14450 2358
chr16 2833954 2837949 - PRSS33 ENSG00000103355.8 2837949 0.89 1.0 14451 13009
chr16 2867164 2876305 + PRSS21 ENSG00000007038.6 2867164 0.99 0.91 14452 42224
chr16 2880170 2888967 + ZG16B ENSG00000162078.7 2880170 0.88 0.99 14453 55230
chr16 2902728 2908171 - PRSS22 ENSG00000005001.5 2908171 0.91 1.0 14454 83231
chr16 2933187 2949383 + FLYWCH2 ENSG00000162076.8 2933187 0.58 1.0 14455 92001
chr16 2961938 3001209 + FLYWCH1 ENSG00000059122.12 2961938 0.56 1.0 14456 63250
chr16 3013945 3018384 + KREMEN2 ENSG00000131650.9 3013945 0.98 1.0 14457 11243
chr16 3019246 3023490 + PAQR4 ENSG00000162073.9 3019246 0.82 1.0 14459 5942
Expression level of Genes
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miRNAs possibly regulated by vista21589[chr16:2924940-2925188]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results