EnhancerDB
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  3. vista21594[chr16:3053798-3054225]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21594[chr16:3053798-3054225]
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Tissue distribution of vista21594
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Transcription factor that possibly regulate vista21594[chr16:3053798-3054225]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 3053661 3054064 CTCF UCSC Txn Factor no Conserved 108173888
chr16 3053664 3054034 RAD21 UCSC Txn Factor no Conserved 108173889
chr16 3053711 3054503 POLR2A UCSC Txn Factor no Conserved 108173895
chr16 3053736 3054014 SMC3 UCSC Txn Factor no Conserved 108173905
chr16 3053810 3054721 E2F1 UCSC Txn Factor no Conserved 108173936
chr16 3053827 3054163 E2F4 UCSC Txn Factor no Conserved 108173940
chr16 3053841 3054221 CHD2 UCSC Txn Factor no Conserved 108173944
chr16 3053845 3054259 NFYB UCSC Txn Factor no Conserved 108173946
chr16 3053865 3054205 SP1 UCSC Txn Factor no Conserved 108173958
chr16 3053873 3054216 NFYA UCSC Txn Factor no Conserved 108173965
chr16 3053908 3054218 FOS UCSC Txn Factor no Conserved 108173982
chr16 3053931 3054181 RUNX3 UCSC Txn Factor no Conserved 108173986
chr16 3053954 3054133 PBX3 UCSC Txn Factor no Conserved 108173992
chr16 3053994 3054098 IRF1 UCSC Txn Factor no Conserved 108173998
chr16 3053783 3053803 RREB1 JASPAR yes 9201439
chr16 3053783 3053803 RREB1 JASPAR yes 49328896
chr16 3053796 3053811 FOXP1 JASPAR yes 9201440
chr16 3053796 3053811 FOXP1 JASPAR yes 49328897
chr16 3053799 3053805 TBP TRANSFAC yes 9201441
chr16 3053799 3053805 TBP TRANSFAC yes 49328898
chr16 3053800 3053815 FOXP1 JASPAR yes 9201442
chr16 3053800 3053815 FOXP1 JASPAR yes 49328899
chr16 3053801 3053812 FOXA1 JASPAR yes 9201443
chr16 3053801 3053812 FOXA1 JASPAR yes 49328900
chr16 3053801 3053816 FOXA1 JASPAR yes 9201444
chr16 3053801 3053816 FOXA1 JASPAR yes 49328901
chr16 3053801 3053822 IRF1 JASPAR yes 9201445
chr16 3053801 3053822 IRF1 JASPAR yes 49328902
chr16 3053802 3053814 FOXC2 JASPAR yes 9201446
chr16 3053802 3053814 FOXC2 JASPAR yes 49328903
chr16 3053803 3053815 FOXI1 JASPAR yes 9201447
chr16 3053803 3053815 FOXI1 JASPAR yes 49328904
chr16 3053868 3053887 CTCF JASPAR yes 9201448
chr16 3053868 3053887 CTCF JASPAR yes 49328905
chr16 3053870 3053880 TCF4 JASPAR yes 9201449
chr16 3053870 3053880 TCF4 JASPAR yes 49328906
chr16 3053871 3053889 ESR1 JASPAR yes 9201450
chr16 3053871 3053889 ESR1 JASPAR yes 49328907
chr16 3053872 3053881 ZEB1 JASPAR yes 9201451
chr16 3053872 3053881 ZEB1 JASPAR yes 49328908
chr16 3053874 3053879 SP1 TRANSFAC yes 9201452
chr16 3053874 3053879 SP1 TRANSFAC yes 49328909
chr16 3053880 3053892 ZBTB7A JASPAR yes 9201453
chr16 3053880 3053892 ZBTB7A JASPAR yes 49328910
chr16 3053889 3053900 NRF1 JASPAR yes 9201454
chr16 3053889 3053900 NRF1 JASPAR yes 49328911
chr16 3053890 3053901 NRF1 JASPAR yes 9201455
chr16 3053890 3053901 NRF1 JASPAR yes 49328912
chr16 3053923 3053932 HiNF-C TRANSFAC yes 9201456
chr16 3053923 3053932 HiNF-C TRANSFAC yes 49328913
chr16 3053923 3053933 SP1 JASPAR yes 9201457
chr16 3053923 3053933 SP1 JASPAR yes 49328914
chr16 3053924 3053930 SP1 TRANSFAC yes 9201458
chr16 3053924 3053930 SP1 TRANSFAC yes 49328915
chr16 3053925 3053930 SP1 TRANSFAC yes 9201459
chr16 3053925 3053930 SP1 TRANSFAC yes 49328916
chr16 3053925 3053936 E2F4 JASPAR yes 9201460
chr16 3053925 3053936 E2F4 JASPAR yes 49328917
chr16 3053926 3053931 SP1 TRANSFAC yes 9201461
chr16 3053926 3053931 SP1 TRANSFAC yes 49328918
chr16 3053926 3053932 SP1 TRANSFAC yes 9201462
chr16 3053926 3053932 SP1 TRANSFAC yes 49328919
chr16 3053932 3053944 NHLH1 JASPAR yes 9201463
chr16 3053932 3053944 NHLH1 JASPAR yes 49328920
chr16 3053933 3053943 NHLH1 JASPAR yes 9201464
chr16 3053933 3053943 NHLH1 JASPAR yes 49328921
chr16 3053939 3053960 REST JASPAR yes 9201465
chr16 3053939 3053960 REST JASPAR yes 49328922
chr16 3053940 3053959 REST JASPAR yes 9201466
chr16 3053940 3053959 REST JASPAR yes 49328923
chr16 3053942 3053952 ID4 JASPAR yes 9201467
chr16 3053942 3053952 TCF4 JASPAR yes 9201468
chr16 3053942 3053952 ID4 JASPAR yes 49328924
chr16 3053942 3053952 TCF4 JASPAR yes 49328925
chr16 3053944 3053949 USF2 TRANSFAC yes 9201469
chr16 3053944 3053949 USF2 TRANSFAC yes 49328926
chr16 3053954 3053970 NFYA JASPAR yes 9201470
chr16 3053954 3053970 NFYA JASPAR yes 49328927
chr16 3053957 3053972 NFYB JASPAR yes 9201471
chr16 3053957 3053972 NFYB JASPAR yes 49328928
chr16 3053959 3053964 NFY TRANSFAC yes 9201472
chr16 3053959 3053964 NFY TRANSFAC yes 49328929
chr16 3053968 3053987 CTCF JASPAR yes 9201473
chr16 3053968 3053987 CTCF JASPAR yes 49328930
chr16 3053973 3053994 ZNF263 JASPAR yes 9201474
chr16 3053973 3053994 ZNF263 JASPAR yes 49328931
chr16 3053978 3053984 SP1 TRANSFAC yes 9201475
chr16 3053978 3053984 SP1 TRANSFAC yes 49328932
chr16 3053978 3053989 E2F1 JASPAR yes 9201476
chr16 3053978 3053989 E2F1 JASPAR yes 49328933
chr16 3053979 3053984 SP1 TRANSFAC yes 9201477
chr16 3053979 3053984 SP1 TRANSFAC yes 49328934
chr16 3053979 3053990 E2F4 JASPAR yes 9201478
chr16 3053979 3053990 E2F6 JASPAR yes 9201479
chr16 3053979 3053990 E2F4 JASPAR yes 49328935
chr16 3053979 3053990 E2F6 JASPAR yes 49328936
chr16 3053980 3053985 SP1 TRANSFAC yes 9201480
chr16 3053980 3053985 SP1 TRANSFAC yes 49328937
chr16 3053983 3053988 ETS2 TRANSFAC yes 9201481
chr16 3053983 3053988 ETS2 TRANSFAC yes 49328938
chr16 3054011 3054029 NFYA JASPAR yes 9201482
chr16 3054011 3054029 NFYA JASPAR yes 49328939
chr16 3054014 3054030 NFYA JASPAR yes 9201483
chr16 3054014 3054030 NFYA JASPAR yes 49328940
chr16 3054017 3054032 NFYB JASPAR yes 9201484
chr16 3054017 3054032 NFYB JASPAR yes 49328941
chr16 3054019 3054024 NFY TRANSFAC yes 9201485
chr16 3054019 3054024 NFY TRANSFAC yes 49328942
chr16 3054026 3054032 NFIC JASPAR yes 9201486
chr16 3054026 3054032 NFIC JASPAR yes 49328943
chr16 3054041 3054048 MEIS1 JASPAR yes 9201487
chr16 3054041 3054048 MEIS1 JASPAR yes 49328944
chr16 3054041 3054049 MEIS2 JASPAR yes 9201488
chr16 3054041 3054049 MEIS3 JASPAR yes 9201489
chr16 3054041 3054049 MEIS2 JASPAR yes 49328945
chr16 3054041 3054049 MEIS3 JASPAR yes 49328946
chr16 3054042 3054054 PKNOX1 JASPAR yes 9201490
chr16 3054042 3054054 PKNOX2 JASPAR yes 9201491
chr16 3054042 3054054 TGIF1 JASPAR yes 9201492
chr16 3054042 3054054 TGIF2 JASPAR yes 9201493
chr16 3054042 3054054 PKNOX1 JASPAR yes 49328947
chr16 3054042 3054054 PKNOX2 JASPAR yes 49328948
chr16 3054042 3054054 TGIF1 JASPAR yes 49328949
chr16 3054042 3054054 TGIF2 JASPAR yes 49328950
chr16 3054043 3054053 MSC JASPAR yes 9201494
chr16 3054043 3054053 MYF6 JASPAR yes 9201495
chr16 3054043 3054053 MSC JASPAR yes 49328951
chr16 3054043 3054053 MYF6 JASPAR yes 49328952
chr16 3054054 3054059 SP1 TRANSFAC yes 9201496
chr16 3054054 3054059 SP1 TRANSFAC yes 49328953
chr16 3054081 3054099 NFYA JASPAR yes 9201497
chr16 3054081 3054099 NFYA JASPAR yes 49328954
chr16 3054084 3054100 NFYA JASPAR yes 9201498
chr16 3054084 3054100 NFYA JASPAR yes 49328955
chr16 3054086 3054106 RREB1 JASPAR yes 9201499
chr16 3054086 3054106 RREB1 JASPAR yes 49328956
chr16 3054087 3054102 NFYB JASPAR yes 9201500
chr16 3054087 3054102 NFYB JASPAR yes 49328957
chr16 3054089 3054094 NFY TRANSFAC yes 9201501
chr16 3054089 3054094 NFY TRANSFAC yes 49328958
chr16 3054110 3054122 NHLH1 JASPAR yes 9201502
chr16 3054110 3054122 NHLH1 JASPAR yes 49328959
chr16 3054111 3054121 NHLH1 JASPAR yes 9201503
chr16 3054111 3054121 NHLH1 JASPAR yes 49328960
chr16 3054115 3054131 NFYA JASPAR yes 9201504
chr16 3054115 3054131 NFYA JASPAR yes 49328961
chr16 3054118 3054133 NFYB JASPAR yes 9201505
chr16 3054118 3054133 NFYB JASPAR yes 49328962
chr16 3054120 3054125 NFY TRANSFAC yes 9201506
chr16 3054120 3054125 NFY TRANSFAC yes 49328963
chr16 3054166 3054176 RORA JASPAR yes 9201507
chr16 3054166 3054176 RORA JASPAR yes 49328964
chr16 3054171 3054175 ESR1 TRANSFAC yes 9201508
chr16 3054171 3054175 ESR1 TRANSFAC yes 49328965
chr16 3054171 3054188 PAX1 JASPAR yes 9201509
chr16 3054171 3054188 PAX1 JASPAR yes 49328966
chr16 3054172 3054191 PAX5 JASPAR yes 9201510
chr16 3054172 3054191 PAX5 JASPAR yes 49328967
chr16 3054184 3054198 PLAG1 JASPAR yes 9201511
chr16 3054184 3054198 PLAG1 JASPAR yes 49328968
chr16 3054194 3054199 SP1 TRANSFAC yes 9201512
chr16 3054194 3054199 SP1 TRANSFAC yes 49328969
chr16 3054194 3054208 PLAG1 JASPAR yes 9201513
chr16 3054194 3054208 PLAG1 JASPAR yes 49328970
chr16 3054197 3054206 TFAP2A JASPAR yes 9201514
chr16 3054197 3054206 TFAP2A JASPAR yes 49328971
SNP sites on vista21594[chr16:3053798-3054225]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 3053811 rs543262996 CA C
CTCF E2F1 FOXA1 FOXC2 FOXI1 FOXP1 IRF1 POLR2A RAD21 SMC3
4266179
chr16 3053842 rs74005571 G C
CHD2 CTCF E2F1 E2F4 POLR2A RAD21 SMC3
4266180
chr16 3053847 rs73484386 C A
CHD2 CTCF E2F1 E2F4 NFYB POLR2A RAD21 SMC3
4266181
chr16 3053862 rs547555440 G A,C
CHD2 CTCF E2F1 E2F4 NFYB POLR2A RAD21 SMC3
4266182
chr16 3053872 rs188165326 C T
CHD2 CTCF E2F1 E2F4 ESR1 NFYB POLR2A RAD21 SMC3 SP1 TCF4 ZEB1
4266183
chr16 3053912 rs2526272 G T
CHD2 CTCF E2F1 E2F4 FOS NFYA NFYB POLR2A RAD21 SMC3 SP1
4266184
chr16 3053926 rs116206130 G C
CHD2 CTCF E2F1 E2F4 FOS HiNF-C NFYA NFYB POLR2A RAD21 SMC3 SP1
4266185
chr16 3053943 rs184035964 G A
CHD2 CTCF E2F1 E2F4 FOS ID4 NFYA NFYB NHLH1 POLR2A RAD21 REST RUNX3 SMC3 SP1 TCF4
4266186
chr16 3053954 rs538951918 C T
CHD2 CTCF E2F1 E2F4 FOS NFYA NFYB PBX3 POLR2A RAD21 REST RUNX3 SMC3 SP1
4266187
chr16 3054005 rs112616731 C A
CHD2 CTCF E2F1 E2F4 FOS IRF1 NFYA NFYB PBX3 POLR2A RAD21 RUNX3 SMC3 SP1
4266188
chr16 3054006 rs572345614 G A
CHD2 CTCF E2F1 E2F4 FOS IRF1 NFYA NFYB PBX3 POLR2A RAD21 RUNX3 SMC3 SP1
4266189
chr16 3054011 rs2524316 C G
CHD2 CTCF E2F1 E2F4 FOS IRF1 NFYA NFYB PBX3 POLR2A RAD21 RUNX3 SMC3 SP1
4266190
chr16 3054088 rs12917920 G C
CHD2 E2F1 E2F4 FOS IRF1 NFYA NFYB PBX3 POLR2A RREB1 RUNX3 SP1
4266191
Genes possibly regulated by vista21594[chr16:3053798-3054225]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 2961938 3001209 + FLYWCH1 ENSG00000059122.12 2961938 0.56 1.0 14456 8140
chr16 3013945 3018384 + KREMEN2 ENSG00000131650.9 3013945 0.98 1.0 14457 60147
chr16 3018025 3030540 - PKMYT1 ENSG00000127564.12 3030540 0.94 1.0 14458 76742
chr16 3019246 3023490 + PAQR4 ENSG00000162073.9 3019246 0.82 1.0 14459 65448
chr16 3062457 3064506 + CLDN9 ENSG00000213937.3 3062457 0.93 0.99 14460 91768
chr16 3064713 3070072 - CLDN6 ENSG00000184697.6 3070072 0.99 0.96 14461 84153
chr16 3068446 3072384 + TNFRSF12A ENSG00000006327.9 3068446 0.79 1.0 14462 85779
chr16 3072621 3074287 - HCFC1R1 ENSG00000103145.6 3074287 0.74 1.0 14463 79938
chr16 3074028 3077756 + THOC6 ENSG00000131652.9 3074028 0.61 1.0 14464 80197
chr16 3077683 3086927 - CCDC64B ENSG00000162069.10 3086927 0.95 1.0 14465 67298
chr16 3096682 3110727 + MMP25 ENSG00000008516.12 3096682 0.98 1.0 14466 57543
chr16 3115298 3131908 + IL32 ENSG00000008517.12 3115298 0.84 0.96 14467 38927
chr16 3138891 3149318 - ZSCAN10 ENSG00000130182.3 3149318 0.88 0.99 14468 4907
Expression level of Genes
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miRNAs possibly regulated by vista21594[chr16:3053798-3054225]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results