EnhancerDB
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  3. vista21599[chr16:3124961-3125268]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21599[chr16:3124961-3125268]
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Tissue distribution of vista21599
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Transcription factor that possibly regulate vista21599[chr16:3124961-3125268]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 3124952 3125277 RUNX3 UCSC Txn Factor no Conserved 108174476
chr16 3124947 3124961 PLAG1 JASPAR yes 9202778
chr16 3124947 3124961 PLAG1 JASPAR yes 49329089
chr16 3124976 3124982 NFIC JASPAR yes 9202779
chr16 3124976 3124982 NFIC JASPAR yes 49329090
chr16 3124979 3124994 TFAP2A JASPAR yes 9202780
chr16 3124979 3124994 TFAP2A JASPAR yes 49329091
chr16 3124981 3124996 TFAP2A JASPAR yes 9202781
chr16 3124981 3124996 TFAP2C JASPAR yes 9202782
chr16 3124981 3124996 TFAP2A JASPAR yes 49329092
chr16 3124981 3124996 TFAP2C JASPAR yes 49329093
chr16 3124982 3124993 TFAP2A JASPAR yes 9202783
chr16 3124982 3124993 TFAP2B JASPAR yes 9202784
chr16 3124982 3124993 TFAP2C JASPAR yes 9202785
chr16 3124982 3124993 TFAP2A JASPAR yes 49329094
chr16 3124982 3124993 TFAP2B JASPAR yes 49329095
chr16 3124982 3124993 TFAP2C JASPAR yes 49329096
chr16 3124983 3124992 TFAP2A JASPAR yes 9202786
chr16 3124983 3124992 TFAP2A JASPAR yes 49329097
chr16 3124988 3124992 LFA1 TRANSFAC yes 9202787
chr16 3124988 3124992 LFA1 TRANSFAC yes 49329098
chr16 3125001 3125021 PPARG JASPAR yes 9202788
chr16 3125001 3125021 PPARG JASPAR yes 49329099
chr16 3125011 3125016 SP1 TRANSFAC yes 9202789
chr16 3125011 3125016 SP1 TRANSFAC yes 49329100
chr16 3125035 3125050 ZBTB33 JASPAR yes 9202790
chr16 3125035 3125050 ZBTB33 JASPAR yes 49329101
chr16 3125038 3125053 ZBTB33 JASPAR yes 9202791
chr16 3125038 3125053 ZBTB33 JASPAR yes 49329102
chr16 3125045 3125055 SP1 JASPAR yes 9202792
chr16 3125045 3125055 SP1 JASPAR yes 49329103
chr16 3125057 3125069 NHLH1 JASPAR yes 9202793
chr16 3125057 3125069 NHLH1 JASPAR yes 49329104
chr16 3125058 3125068 NHLH1 JASPAR yes 9202794
chr16 3125058 3125068 TFAP4 JASPAR yes 9202795
chr16 3125058 3125068 NHLH1 JASPAR yes 49329105
chr16 3125058 3125068 TFAP4 JASPAR yes 49329106
chr16 3125067 3125078 CEBPA JASPAR yes 9202796
chr16 3125067 3125078 CEBPA JASPAR yes 49329107
chr16 3125067 3125079 DBP JASPAR yes 9202797
chr16 3125067 3125079 HLF JASPAR yes 9202798
chr16 3125067 3125079 TEF JASPAR yes 9202799
chr16 3125067 3125079 DBP JASPAR yes 49329108
chr16 3125067 3125079 HLF JASPAR yes 49329109
chr16 3125067 3125079 TEF JASPAR yes 49329110
chr16 3125068 3125078 CEBPB JASPAR yes 9202800
chr16 3125068 3125078 CEBPD JASPAR yes 9202801
chr16 3125068 3125078 CEBPE JASPAR yes 9202802
chr16 3125068 3125078 CEBPG JASPAR yes 9202803
chr16 3125068 3125078 CEBPB JASPAR yes 49329111
chr16 3125068 3125078 CEBPD JASPAR yes 49329112
chr16 3125068 3125078 CEBPE JASPAR yes 49329113
chr16 3125068 3125078 CEBPG JASPAR yes 49329114
chr16 3125069 3125077 NF-IL6 TRANSFAC yes 9202804
chr16 3125069 3125077 NF-IL6 TRANSFAC yes 49329115
chr16 3125074 3125077 MYB TRANSFAC yes 9202805
chr16 3125074 3125077 MYB TRANSFAC yes 49329116
chr16 3125085 3125101 ZNF143 JASPAR yes 9202806
chr16 3125085 3125101 ZNF143 JASPAR yes 49329117
chr16 3125091 3125101 SREBF1 JASPAR yes 9202807
chr16 3125091 3125101 SREBF2 JASPAR yes 9202808
chr16 3125091 3125101 SREBF1 JASPAR yes 49329118
chr16 3125091 3125101 SREBF2 JASPAR yes 49329119
chr16 3125091 3125102 TBX2 JASPAR yes 9202809
chr16 3125091 3125102 TBX2 JASPAR yes 49329120
chr16 3125091 3125104 EOMES JASPAR yes 9202810
chr16 3125091 3125104 EOMES JASPAR yes 49329121
chr16 3125092 3125100 MGA JASPAR yes 9202811
chr16 3125092 3125100 MGA JASPAR yes 49329122
chr16 3125107 3125118 FLI1 JASPAR yes 9202812
chr16 3125107 3125118 FLI1 JASPAR yes 49329123
chr16 3125108 3125116 EHF JASPAR yes 9202813
chr16 3125108 3125116 EHF JASPAR yes 49329124
chr16 3125123 3125133 ELK1 JASPAR yes 9202814
chr16 3125123 3125133 ELK1 JASPAR yes 49329125
chr16 3125123 3125135 ELF1 JASPAR yes 9202815
chr16 3125123 3125135 ELF1 JASPAR yes 49329126
chr16 3125125 3125134 ELK4 JASPAR yes 9202816
chr16 3125125 3125134 ELK4 JASPAR yes 49329127
chr16 3125125 3125135 GABPA JASPAR yes 9202817
chr16 3125125 3125135 GABPA JASPAR yes 49329128
chr16 3125125 3125136 ELK4 JASPAR yes 9202818
chr16 3125125 3125136 ELK4 JASPAR yes 49329129
chr16 3125127 3125133 ETS1 JASPAR yes 9202819
chr16 3125127 3125133 SPI1 JASPAR yes 9202820
chr16 3125127 3125133 ETS1 JASPAR yes 49329130
chr16 3125127 3125133 SPI1 JASPAR yes 49329131
chr16 3125161 3125166 GATA2 JASPAR yes 9202821
chr16 3125161 3125166 GATA2 JASPAR yes 49329132
chr16 3125166 3125181 NR2C2 JASPAR yes 9202822
chr16 3125166 3125181 NR2C2 JASPAR yes 49329133
chr16 3125176 3125188 PBX1 JASPAR yes 9202823
chr16 3125176 3125188 PBX1 JASPAR yes 49329134
chr16 3125187 3125201 MTF1 JASPAR yes 9202824
chr16 3125187 3125201 MTF1 JASPAR yes 49329135
chr16 3125215 3125226 STAT1 JASPAR yes 9202825
chr16 3125215 3125226 STAT3 JASPAR yes 9202826
chr16 3125215 3125226 STAT1 JASPAR yes 49329136
chr16 3125215 3125226 STAT3 JASPAR yes 49329137
chr16 3125235 3125248 SCRT2 JASPAR yes 9202827
chr16 3125235 3125248 SCRT2 JASPAR yes 49329138
chr16 3125251 3125266 FOXA1 JASPAR yes 9202828
chr16 3125251 3125266 FOXA1 JASPAR yes 49329139
chr16 3125255 3125263 FOXO3 JASPAR yes 9202829
chr16 3125255 3125263 FOXO3 JASPAR yes 49329140
chr16 3125258 3125273 SOX21 JASPAR yes 9202830
chr16 3125258 3125273 SOX21 JASPAR yes 49329141
SNP sites on vista21599[chr16:3124961-3125268]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 3124962 rs369051493 T C
RUNX3
4266797
chr16 3125001 rs147900222 T C
PPARG RUNX3
4266798
chr16 3125043 rs376754319 C T
RUNX3 ZBTB33
4266799
chr16 3125044 rs560489778 G A
RUNX3 ZBTB33
4266800
chr16 3125096 rs111286146 T C
EOMES MGA RUNX3 SREBF1 SREBF2 TBX2 ZNF143
4266801
chr16 3125135 rs570347148 T C
ELF1 ELK4 GABPA RUNX3
4266802
chr16 3125151 rs4786376 C G
RUNX3
4266803
chr16 3125203 rs12917910 C T
RUNX3
4266804
Genes possibly regulated by vista21599[chr16:3124961-3125268]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 3018025 3030540 - PKMYT1 ENSG00000127564.12 3030540 0.94 1.0 14458 5579
chr16 3062457 3064506 + CLDN9 ENSG00000213937.3 3062457 0.93 0.99 14460 37496
chr16 3064713 3070072 - CLDN6 ENSG00000184697.6 3070072 0.99 0.96 14461 45111
chr16 3068446 3072384 + TNFRSF12A ENSG00000006327.9 3068446 0.79 1.0 14462 43485
chr16 3072621 3074287 - HCFC1R1 ENSG00000103145.6 3074287 0.74 1.0 14463 49326
chr16 3074028 3077756 + THOC6 ENSG00000131652.9 3074028 0.61 1.0 14464 49067
chr16 3077683 3086927 - CCDC64B ENSG00000162069.10 3086927 0.95 1.0 14465 61966
chr16 3096682 3110727 + MMP25 ENSG00000008516.12 3096682 0.98 1.0 14466 71721
chr16 3115298 3131908 + IL32 ENSG00000008517.12 3115298 0.84 0.96 14467 90337
chr16 3138891 3149318 - ZSCAN10 ENSG00000130182.3 3149318 0.88 0.99 14468 75950
chr16 3162561 3170518 + ZNF205 ENSG00000122386.6 3162561 0.62 1.0 14469 62707
chr16 3179778 3192806 + ZNF213 ENSG00000085644.9 3179778 0.61 1.0 14470 45490
chr16 3194220 3199964 + CASP16 ENSG00000228146.2 3194220 0.97 1.0 14471 31048
Expression level of Genes
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miRNAs possibly regulated by vista21599[chr16:3124961-3125268]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results