EnhancerDB
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  3. vista21601[chr16:3145997-3146167]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21601[chr16:3145997-3146167]
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Tissue distribution of vista21601
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Transcription factor that possibly regulate vista21601[chr16:3145997-3146167]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 3145840 3146270 CTCF UCSC Txn Factor no Conserved 108174519
chr16 3145997 3146009 MEF2D JASPAR yes 49329256
chr16 3145999 3146014 FOXP1 JASPAR yes 49329257
chr16 3146005 3146011 TBP TRANSFAC yes 49329258
chr16 3146012 3146016 TEAD2 TRANSFAC yes 49329259
chr16 3146012 3146017 TBP TRANSFAC yes 49329260
chr16 3146012 3146018 TFIID TRANSFAC yes 49329261
chr16 3146017 3146028 NFE2 JASPAR yes 49329262
chr16 3146018 3146027 JDP2 JASPAR yes 49329263
chr16 3146030 3146049 CTCF JASPAR yes 49329264
chr16 3146050 3146071 ZNF263 JASPAR yes 49329265
chr16 3146070 3146074 H1TF2 TRANSFAC yes 49329266
chr16 3146070 3146074 NFE TRANSFAC yes 49329267
chr16 3146070 3146074 SRF TRANSFAC yes 49329268
chr16 3146084 3146095 NFKB1 JASPAR yes 49329269
chr16 3146084 3146097 NFKB1 JASPAR yes 49329270
chr16 3146084 3146097 NFKB2 JASPAR yes 49329271
chr16 3146085 3146095 NFKB1 JASPAR yes 49329272
chr16 3146085 3146095 RELA JASPAR yes 49329273
chr16 3146085 3146096 NFKB1 JASPAR yes 49329274
chr16 3146087 3146101 SPIC JASPAR yes 49329275
chr16 3146092 3146103 FLI1 JASPAR yes 49329276
chr16 3146093 3146104 ELF5 JASPAR yes 49329277
chr16 3146093 3146105 ELF4 JASPAR yes 49329278
chr16 3146093 3146106 ELF1 JASPAR yes 49329279
chr16 3146094 3146102 EHF JASPAR yes 49329280
chr16 3146125 3146130 TFAP2A TRANSFAC yes 49329281
chr16 3146125 3146131 MZF1 JASPAR yes 49329282
chr16 3146125 3146138 NFKB1 JASPAR yes 49329283
chr16 3146126 3146137 NFKB1 JASPAR yes 49329284
chr16 3146147 3146157 SP1 JASPAR yes 49329285
SNP sites on vista21601[chr16:3145997-3146167]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 3146028 rs2037983 C T
CTCF NFE2
4267067
chr16 3146030 rs147426815 A G
CTCF
4267068
chr16 3146075 rs139060913 T G
CTCF
4267069
chr16 3146137 rs113440780 C T
CTCF NFKB1
4267070
Genes possibly regulated by vista21601[chr16:3145997-3146167]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 3062457 3064506 + CLDN9 ENSG00000213937.3 3062457 0.93 0.99 14460 16460
chr16 3064713 3070072 - CLDN6 ENSG00000184697.6 3070072 0.99 0.96 14461 24075
chr16 3068446 3072384 + TNFRSF12A ENSG00000006327.9 3068446 0.79 1.0 14462 22449
chr16 3072621 3074287 - HCFC1R1 ENSG00000103145.6 3074287 0.74 1.0 14463 28290
chr16 3074028 3077756 + THOC6 ENSG00000131652.9 3074028 0.61 1.0 14464 28031
chr16 3077683 3086927 - CCDC64B ENSG00000162069.10 3086927 0.95 1.0 14465 40930
chr16 3096682 3110727 + MMP25 ENSG00000008516.12 3096682 0.98 1.0 14466 50685
chr16 3115298 3131908 + IL32 ENSG00000008517.12 3115298 0.84 0.96 14467 69301
chr16 3138891 3149318 - ZSCAN10 ENSG00000130182.3 3149318 0.88 0.99 14468 96849
chr16 3162561 3170518 + ZNF205 ENSG00000122386.6 3162561 0.62 1.0 14469 83606
chr16 3179778 3192806 + ZNF213 ENSG00000085644.9 3179778 0.61 1.0 14470 66389
chr16 3194220 3199964 + CASP16 ENSG00000228146.2 3194220 0.97 1.0 14471 51947
Expression level of Genes
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miRNAs possibly regulated by vista21601[chr16:3145997-3146167]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results