EnhancerDB
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  3. vista21604[chr16:3156518-3156937]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21604[chr16:3156518-3156937]
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Tissue distribution of vista21604
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Transcription factor that possibly regulate vista21604[chr16:3156518-3156937]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 3156029 3157128 POLR2A UCSC Txn Factor no Conserved 108174580
chr16 3156029 3157128 POLR2A UCSC Txn Factor no Conserved 108174581
chr16 3156203 3156656 PHF8 UCSC Txn Factor no Conserved 108174586
chr16 3156203 3156656 PHF8 UCSC Txn Factor no Conserved 108174587
chr16 3156298 3156729 GABPA UCSC Txn Factor no Conserved 108174610
chr16 3156298 3156729 GABPA UCSC Txn Factor no Conserved 108174611
chr16 3156326 3156762 ELF1 UCSC Txn Factor no Conserved 108174618
chr16 3156333 3156769 MAZ UCSC Txn Factor no Conserved 108174623
chr16 3156545 3156981 MXI1 UCSC Txn Factor no Conserved 108174704
chr16 3156519 3156526 E2F1 TRANSFAC yes 49329339
chr16 3156519 3156527 E2F1 JASPAR yes 49329340
chr16 3156534 3156548 SPI1 JASPAR yes 49329341
chr16 3156535 3156548 ELF1 JASPAR yes 49329342
chr16 3156536 3156546 ELK1 JASPAR yes 49329343
chr16 3156536 3156548 EHF JASPAR yes 49329344
chr16 3156536 3156548 ELF1 JASPAR yes 49329345
chr16 3156536 3156548 ELF4 JASPAR yes 49329346
chr16 3156536 3156549 ELF3 JASPAR yes 49329347
chr16 3156537 3156548 ELF5 JASPAR yes 49329348
chr16 3156537 3156548 ETV2 JASPAR yes 49329349
chr16 3156537 3156548 SPDEF JASPAR yes 49329350
chr16 3156538 3156547 ELK4 JASPAR yes 49329351
chr16 3156538 3156548 ELK1 JASPAR yes 49329352
chr16 3156538 3156548 ELK3 JASPAR yes 49329353
chr16 3156538 3156548 ERF JASPAR yes 49329354
chr16 3156538 3156548 ERG JASPAR yes 49329355
chr16 3156538 3156548 ETS1 JASPAR yes 49329356
chr16 3156538 3156548 ETV1 JASPAR yes 49329357
chr16 3156538 3156548 ETV3 JASPAR yes 49329358
chr16 3156538 3156548 ETV4 JASPAR yes 49329359
chr16 3156538 3156548 ETV5 JASPAR yes 49329360
chr16 3156538 3156548 ETV6 JASPAR yes 49329361
chr16 3156538 3156548 FEV JASPAR yes 49329362
chr16 3156538 3156548 FLI1 JASPAR yes 49329363
chr16 3156538 3156548 GABPA JASPAR yes 49329364
chr16 3156538 3156549 ELK4 JASPAR yes 49329365
chr16 3156538 3156549 FLI1 JASPAR yes 49329366
chr16 3156539 3156547 FEV JASPAR yes 49329367
chr16 3156540 3156546 ETS1 JASPAR yes 49329368
chr16 3156540 3156546 SPI1 JASPAR yes 49329369
chr16 3156550 3156570 PPARG JASPAR yes 49329370
chr16 3156554 3156558 LFA1 TRANSFAC yes 49329371
chr16 3156587 3156599 HINFP JASPAR yes 49329372
chr16 3156590 3156594 H4TF2 TRANSFAC yes 49329373
chr16 3156638 3156650 NHLH1 JASPAR yes 49329374
chr16 3156641 3156650 ZEB1 JASPAR yes 49329375
chr16 3156646 3156665 PAX5 JASPAR yes 49329376
chr16 3156647 3156653 SP1 TRANSFAC yes 49329377
chr16 3156648 3156653 SP1 TRANSFAC yes 49329378
chr16 3156649 3156659 SP1 JASPAR yes 49329379
chr16 3156652 3156657 SP1 TRANSFAC yes 49329380
chr16 3156652 3156658 SP1 TRANSFAC yes 49329381
chr16 3156654 3156664 SP1 JASPAR yes 49329382
chr16 3156655 3156663 SP1 TRANSFAC yes 49329383
chr16 3156655 3156664 SP1 TRANSFAC yes 49329384
chr16 3156656 3156661 SP1 TRANSFAC yes 49329385
chr16 3156657 3156662 SP1 TRANSFAC yes 49329386
chr16 3156657 3156663 SP1 TRANSFAC yes 49329387
chr16 3156665 3156675 SP1 JASPAR yes 49329388
chr16 3156666 3156674 SP1 TRANSFAC yes 49329389
chr16 3156667 3156672 SP1 TRANSFAC yes 49329390
chr16 3156668 3156673 SP1 TRANSFAC yes 49329391
chr16 3156668 3156674 SP1 TRANSFAC yes 49329392
chr16 3156669 3156677 SP1 TRANSFAC yes 49329393
chr16 3156669 3156677 WT1 TRANSFAC yes 49329394
chr16 3156671 3156678 SP1 TRANSFAC yes 49329395
chr16 3156671 3156681 SP1 JASPAR yes 49329396
chr16 3156671 3156689 ESR1 JASPAR yes 49329397
chr16 3156672 3156680 SP1 TRANSFAC yes 49329398
chr16 3156672 3156681 SP1 TRANSFAC yes 49329399
chr16 3156673 3156678 SP1 TRANSFAC yes 49329400
chr16 3156674 3156679 SP1 TRANSFAC yes 49329401
chr16 3156674 3156680 SP1 TRANSFAC yes 49329402
chr16 3156677 3156682 SP1 TRANSFAC yes 49329403
chr16 3156689 3156704 NFYB JASPAR yes 49329404
chr16 3156691 3156707 NFYA JASPAR yes 49329405
chr16 3156692 3156710 NFYA JASPAR yes 49329406
chr16 3156696 3156700 H1TF2 TRANSFAC yes 49329407
chr16 3156696 3156700 NFE TRANSFAC yes 49329408
chr16 3156696 3156700 SRF TRANSFAC yes 49329409
chr16 3156715 3156725 SP1 JASPAR yes 49329410
chr16 3156716 3156725 SP1 TRANSFAC yes 49329411
chr16 3156717 3156722 SP1 TRANSFAC yes 49329412
chr16 3156718 3156723 SP1 TRANSFAC yes 49329413
chr16 3156718 3156724 SP1 TRANSFAC yes 49329414
chr16 3156720 3156730 SP1 JASPAR yes 49329415
chr16 3156721 3156729 SP1 TRANSFAC yes 49329416
chr16 3156721 3156730 SP1 TRANSFAC yes 49329417
chr16 3156722 3156727 SP1 TRANSFAC yes 49329418
chr16 3156723 3156728 SP1 TRANSFAC yes 49329419
chr16 3156723 3156729 SP1 TRANSFAC yes 49329420
chr16 3156726 3156731 SP1 TRANSFAC yes 49329421
chr16 3156727 3156746 RFX2 JASPAR yes 49329422
chr16 3156731 3156747 RFX2 JASPAR yes 49329423
chr16 3156731 3156747 RFX3 JASPAR yes 49329424
chr16 3156731 3156747 RFX4 JASPAR yes 49329425
chr16 3156731 3156747 RFX5 JASPAR yes 49329426
chr16 3156732 3156751 RFX2 JASPAR yes 49329427
chr16 3156768 3156782 NR2F1 JASPAR yes 49329428
chr16 3156797 3156811 GLIS2 JASPAR yes 49329429
chr16 3156815 3156829 GLIS2 JASPAR yes 49329430
chr16 3156821 3156833 NHLH1 JASPAR yes 49329431
chr16 3156856 3156866 SP1 JASPAR yes 49329432
chr16 3156911 3156920 SRY JASPAR yes 49329433
chr16 3156913 3156916 MYB TRANSFAC yes 49329434
chr16 3156914 3156930 SOX8 JASPAR yes 49329435
chr16 3156919 3156930 FOXH1 JASPAR yes 49329436
chr16 3156925 3156930 ETS2 TRANSFAC yes 49329437
chr16 3156932 3156936 H4TF2 TRANSFAC yes 49329438
SNP sites on vista21604[chr16:3156518-3156937]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 3156592 rs2294149 G A
ELF1 GABPA H4TF2 HINFP MAZ MXI1 PHF8 POLR2A
4267195
chr16 3156633 rs560268677 G C,T
ELF1 GABPA MAZ MXI1 PHF8 POLR2A
4267196
chr16 3156655 rs558928556 CGGGGCGGGGCT C
ELF1 GABPA MAZ MXI1 PAX5 PHF8 POLR2A SP1
4267197
chr16 3156666 rs57398822 T A,G
ELF1 GABPA MAZ MXI1 POLR2A SP1
4267198
chr16 3156672 rs576746161 G T
ELF1 ESR1 GABPA MAZ MXI1 POLR2A SP1 WT1
4267199
chr16 3156779 rs186423496 C A
MXI1 NR2F1 POLR2A
4267200
chr16 3156895 rs566638543 C G
MXI1 POLR2A
4267201
Genes possibly regulated by vista21604[chr16:3156518-3156937]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 3062457 3064506 + CLDN9 ENSG00000213937.3 3062457 0.93 0.99 14460 5939
chr16 3064713 3070072 - CLDN6 ENSG00000184697.6 3070072 0.99 0.96 14461 13554
chr16 3068446 3072384 + TNFRSF12A ENSG00000006327.9 3068446 0.79 1.0 14462 11928
chr16 3072621 3074287 - HCFC1R1 ENSG00000103145.6 3074287 0.74 1.0 14463 17769
chr16 3074028 3077756 + THOC6 ENSG00000131652.9 3074028 0.61 1.0 14464 17510
chr16 3077683 3086927 - CCDC64B ENSG00000162069.10 3086927 0.95 1.0 14465 30409
chr16 3096682 3110727 + MMP25 ENSG00000008516.12 3096682 0.98 1.0 14466 40164
chr16 3115298 3131908 + IL32 ENSG00000008517.12 3115298 0.84 0.96 14467 58780
chr16 3138891 3149318 - ZSCAN10 ENSG00000130182.3 3149318 0.88 0.99 14468 92800
chr16 3162561 3170518 + ZNF205 ENSG00000122386.6 3162561 0.62 1.0 14469 94376
chr16 3179778 3192806 + ZNF213 ENSG00000085644.9 3179778 0.61 1.0 14470 77159
chr16 3194220 3199964 + CASP16 ENSG00000228146.2 3194220 0.97 1.0 14471 62717
chr16 3254247 3255188 + OR1F1 ENSG00000168124.2 3254247 1.0 0.89 14472 2690
Expression level of Genes
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miRNAs possibly regulated by vista21604[chr16:3156518-3156937]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results