EnhancerDB
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  3. vista21605[chr16:3200393-3200919]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21605[chr16:3200393-3200919]
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Tissue distribution of vista21605
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Transcription factor that possibly regulate vista21605[chr16:3200393-3200919]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 3200450 3200971 TBP UCSC Txn Factor no Conserved 108174854
chr16 3200459 3200899 TEAD4 UCSC Txn Factor no Conserved 108174859
chr16 3200466 3201135 RPC155 UCSC Txn Factor no Conserved 108174867
chr16 3200482 3201106 ATF3 UCSC Txn Factor no Conserved 108174883
chr16 3200523 3200923 MYBL2 UCSC Txn Factor no Conserved 108174903
chr16 3200529 3200759 BDP1 UCSC Txn Factor no Conserved 108174907
chr16 3200562 3200850 ETS1 UCSC Txn Factor no Conserved 108174922
chr16 3200594 3200828 RUNX3 UCSC Txn Factor no Conserved 108174938
chr16 3200725 3201058 UBTF UCSC Txn Factor no Conserved 108174970
chr16 3200381 3200396 ZIC3 JASPAR yes 9205414
chr16 3200381 3200396 ZIC4 JASPAR yes 9205415
chr16 3200381 3200396 ZIC3 JASPAR yes 49329439
chr16 3200381 3200396 ZIC4 JASPAR yes 49329440
chr16 3200382 3200396 ZIC1 JASPAR yes 9205416
chr16 3200382 3200396 ZIC1 JASPAR yes 49329441
chr16 3200384 3200395 E2F4 JASPAR yes 9205417
chr16 3200384 3200395 E2F6 JASPAR yes 9205418
chr16 3200384 3200395 E2F4 JASPAR yes 49329442
chr16 3200384 3200395 E2F6 JASPAR yes 49329443
chr16 3200391 3200401 MAX JASPAR yes 9205420
chr16 3200391 3200401 MAX JASPAR yes 49329444
chr16 3200430 3200435 SP1 TRANSFAC yes 9205421
chr16 3200430 3200435 SP1 TRANSFAC yes 49329445
chr16 3200440 3200460 RREB1 JASPAR yes 9205422
chr16 3200440 3200460 RREB1 JASPAR yes 49329446
chr16 3200441 3200462 ZNF263 JASPAR yes 9205423
chr16 3200441 3200462 ZNF263 JASPAR yes 49329447
chr16 3200443 3200449 MAZ TRANSFAC yes 9205424
chr16 3200443 3200449 MAZ TRANSFAC yes 49329448
chr16 3200443 3200454 SP1 TRANSFAC yes 9205425
chr16 3200443 3200454 SP1 TRANSFAC yes 49329449
chr16 3200448 3200453 SP1 TRANSFAC yes 9205426
chr16 3200448 3200453 SP1 TRANSFAC yes 49329450
chr16 3200456 3200462 SP1 TRANSFAC yes 9205427
chr16 3200456 3200462 SP1 TRANSFAC yes 49329451
chr16 3200456 3200476 ESR1 JASPAR yes 9205428
chr16 3200456 3200476 ESR1 JASPAR yes 49329452
chr16 3200457 3200462 SP1 TRANSFAC yes 9205429
chr16 3200457 3200462 SP1 TRANSFAC yes 49329453
chr16 3200458 3200463 SP1 TRANSFAC yes 9205430
chr16 3200458 3200463 SP1 TRANSFAC yes 49329454
chr16 3200493 3200502 TFAP2A JASPAR yes 9205431
chr16 3200493 3200502 TFAP2A JASPAR yes 49329455
chr16 3200556 3200568 ZBTB7A JASPAR yes 9205432
chr16 3200556 3200568 ZBTB7A JASPAR yes 49329456
chr16 3200557 3200562 SP1 TRANSFAC yes 9205433
chr16 3200557 3200562 SP1 TRANSFAC yes 49329457
chr16 3200574 3200580 ETS1 JASPAR yes 9205434
chr16 3200574 3200580 SPI1 JASPAR yes 9205435
chr16 3200574 3200580 ETS1 JASPAR yes 49329458
chr16 3200574 3200580 SPI1 JASPAR yes 49329459
chr16 3200600 3200611 NRF1 JASPAR yes 9205436
chr16 3200600 3200611 NRF1 JASPAR yes 49329460
chr16 3200638 3200649 HOXC13 JASPAR yes 9205437
chr16 3200638 3200649 HOXC13 JASPAR yes 49329461
chr16 3200651 3200664 SMAD2 JASPAR yes 9205438
chr16 3200651 3200664 SMAD2 JASPAR yes 49329462
chr16 3200663 3200678 TFAP2A JASPAR yes 9205439
chr16 3200663 3200678 TFAP2C JASPAR yes 9205440
chr16 3200663 3200678 TFAP2A JASPAR yes 49329463
chr16 3200663 3200678 TFAP2C JASPAR yes 49329464
chr16 3200667 3200687 ESR1 JASPAR yes 9205441
chr16 3200667 3200687 ESR1 JASPAR yes 49329465
chr16 3200671 3200689 ESR2 JASPAR yes 9205442
chr16 3200671 3200689 ESR2 JASPAR yes 49329466
chr16 3200685 3200694 VENTX JASPAR yes 9205443
chr16 3200685 3200694 VENTX JASPAR yes 49329467
chr16 3200690 3200695 GATA2 JASPAR yes 9205444
chr16 3200690 3200695 GATA2 JASPAR yes 49329468
chr16 3200693 3200705 PROX1 JASPAR yes 9205445
chr16 3200693 3200705 PROX1 JASPAR yes 49329469
chr16 3200736 3200748 GLI2 JASPAR yes 9205446
chr16 3200736 3200748 GLI2 JASPAR yes 49329470
chr16 3200741 3200760 RFX2 JASPAR yes 9205447
chr16 3200741 3200760 RFX2 JASPAR yes 49329471
chr16 3200745 3200761 RFX2 JASPAR yes 9205448
chr16 3200745 3200761 RFX3 JASPAR yes 9205449
chr16 3200745 3200761 RFX4 JASPAR yes 9205450
chr16 3200745 3200761 RFX5 JASPAR yes 9205451
chr16 3200745 3200761 RFX2 JASPAR yes 49329472
chr16 3200745 3200761 RFX3 JASPAR yes 49329473
chr16 3200745 3200761 RFX4 JASPAR yes 49329474
chr16 3200745 3200761 RFX5 JASPAR yes 49329475
chr16 3200746 3200758 YY1 JASPAR yes 9205452
chr16 3200746 3200758 YY1 JASPAR yes 49329476
chr16 3200756 3200759 MYB TRANSFAC yes 9205453
chr16 3200756 3200759 MYB TRANSFAC yes 49329477
chr16 3200773 3200782 NKX3-2 JASPAR yes 9205454
chr16 3200773 3200782 NKX3-2 JASPAR yes 49329478
chr16 3200773 3200783 NKX2-3 JASPAR yes 9205455
chr16 3200773 3200783 NKX2-3 JASPAR yes 49329479
chr16 3200774 3200782 ISL2 JASPAR yes 9205456
chr16 3200774 3200782 ISL2 JASPAR yes 49329480
chr16 3200774 3200783 NKX2-8 JASPAR yes 9205457
chr16 3200774 3200783 NKX2-8 JASPAR yes 49329481
chr16 3200785 3200806 REST JASPAR yes 9205458
chr16 3200785 3200806 REST JASPAR yes 49329482
chr16 3200787 3200796 ZEB1 JASPAR yes 9205459
chr16 3200787 3200796 ZEB1 JASPAR yes 49329483
chr16 3200788 3200799 EBF1 JASPAR yes 9205460
chr16 3200788 3200799 EBF1 JASPAR yes 49329484
chr16 3200790 3200795 USF2 TRANSFAC yes 9205461
chr16 3200790 3200795 USF2 TRANSFAC yes 49329485
chr16 3200848 3200858 SP1 JASPAR yes 9205462
chr16 3200848 3200858 SP1 JASPAR yes 49329486
chr16 3200862 3200877 AR JASPAR yes 9205463
chr16 3200862 3200877 AR JASPAR yes 49329487
chr16 3200873 3200892 REST JASPAR yes 9205464
chr16 3200873 3200892 REST JASPAR yes 49329488
SNP sites on vista21605[chr16:3200393-3200919]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 3200419 rs552470375 C T no 4267418
chr16 3200475 rs140789674 C T
ESR1 RPC155 TBP TEAD4
4267419
chr16 3200515 rs150109108 C T
ATF3 RPC155 TBP TEAD4
4267420
chr16 3200548 rs556080799 G A
ATF3 BDP1 MYBL2 RPC155 TBP TEAD4
4267421
chr16 3200549 rs185911129 C G
ATF3 BDP1 MYBL2 RPC155 TBP TEAD4
4267422
chr16 3200611 rs113316487 G A
ATF3 BDP1 ETS1 MYBL2 NRF1 RPC155 RUNX3 TBP TEAD4
4267423
chr16 3200616 rs113239087 A G
ATF3 BDP1 ETS1 MYBL2 RPC155 RUNX3 TBP TEAD4
4267424
chr16 3200623 rs182464619 G T
ATF3 BDP1 ETS1 MYBL2 RPC155 RUNX3 TBP TEAD4
4267425
chr16 3200658 rs115131411 G A
ATF3 BDP1 ETS1 MYBL2 RPC155 RUNX3 SMAD2 TBP TEAD4
4267426
chr16 3200660 rs2735515 G A,C
ATF3 BDP1 ETS1 MYBL2 RPC155 RUNX3 SMAD2 TBP TEAD4
4267427
chr16 3200662 rs116098318 C T
ATF3 BDP1 ETS1 MYBL2 RPC155 RUNX3 SMAD2 TBP TEAD4
4267428
chr16 3200663 rs72774408 A C,G,T
ATF3 BDP1 ETS1 MYBL2 RPC155 RUNX3 SMAD2 TBP TEAD4 TFAP2A TFAP2C
4267429
chr16 3200665 rs376515076 A G,T
ATF3 BDP1 ETS1 MYBL2 RPC155 RUNX3 TBP TEAD4 TFAP2A TFAP2C
4267430
chr16 3200666 rs577840712 C G,T
ATF3 BDP1 ETS1 MYBL2 RPC155 RUNX3 TBP TEAD4 TFAP2A TFAP2C
4267431
chr16 3200668 rs149631420 G A,C,T
ATF3 BDP1 ESR1 ETS1 MYBL2 RPC155 RUNX3 TBP TEAD4 TFAP2A TFAP2C
4267432
chr16 3200669 rs544259623 C A,G,T
ATF3 BDP1 ESR1 ETS1 MYBL2 RPC155 RUNX3 TBP TEAD4 TFAP2A TFAP2C
4267433
chr16 3200672 rs116148491 C A,G,T
ATF3 BDP1 ESR1 ESR2 ETS1 MYBL2 RPC155 RUNX3 TBP TEAD4 TFAP2A TFAP2C
4267434
chr16 3200758 rs182524748 A G,T
ATF3 BDP1 ETS1 MYB MYBL2 RFX2 RFX3 RFX4 RFX5 RPC155 RUNX3 TBP TEAD4 UBTF YY1
4267435
chr16 3200761 rs542041240 G A,T
ATF3 ETS1 MYBL2 RFX2 RFX3 RFX4 RFX5 RPC155 RUNX3 TBP TEAD4 UBTF
4267436
chr16 3200849 rs73492476 C T
ATF3 ETS1 MYBL2 RPC155 SP1 TBP TEAD4 UBTF
4267437
chr16 3200859 rs141486260 C A
ATF3 MYBL2 RPC155 TBP TEAD4 UBTF
4267438
chr16 3200862 rs192074988 T C
AR ATF3 MYBL2 RPC155 TBP TEAD4 UBTF
4267439
chr16 3200881 rs2238386 C G
ATF3 MYBL2 REST RPC155 TBP TEAD4 UBTF
4267440
chr16 3200883 rs74003314 C G
ATF3 MYBL2 REST RPC155 TBP TEAD4 UBTF
4267441
chr16 3200902 rs2735516 G A,C
ATF3 MYBL2 RPC155 TBP UBTF
4267442
chr16 3200917 rs537247544 C G
ATF3 MYBL2 RPC155 TBP UBTF
4267443
Genes possibly regulated by vista21605[chr16:3200393-3200919]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 3115298 3131908 + IL32 ENSG00000008517.12 3115298 0.84 0.96 14467 14905
chr16 3138891 3149318 - ZSCAN10 ENSG00000130182.3 3149318 0.88 0.99 14468 48925
chr16 3162561 3170518 + ZNF205 ENSG00000122386.6 3162561 0.62 1.0 14469 62168
chr16 3179778 3192806 + ZNF213 ENSG00000085644.9 3179778 0.61 1.0 14470 79385
chr16 3194220 3199964 + CASP16 ENSG00000228146.2 3194220 0.97 1.0 14471 93827
chr16 3254247 3255188 + OR1F1 ENSG00000168124.2 3254247 1.0 0.89 14472 46672
chr16 3272325 3286221 - ZNF200 ENSG00000010539.7 3286221 0.59 0.99 14473 14698
Expression level of Genes
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miRNAs possibly regulated by vista21605[chr16:3200393-3200919]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results