EnhancerDB
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  3. vista21608[chr16:3221173-3221513]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21608[chr16:3221173-3221513]
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Tissue distribution of vista21608
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Transcription factor that possibly regulate vista21608[chr16:3221173-3221513]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 3221312 3221605 RUNX3 UCSC Txn Factor no Conserved 108175207
chr16 3221161 3221175 TLX1 JASPAR yes 9208374
chr16 3221161 3221175 TLX1 JASPAR yes 49329538
chr16 3221207 3221214 CEBPA TRANSFAC yes 9208375
chr16 3221207 3221214 CEBPA TRANSFAC yes 49329539
chr16 3221212 3221222 NFKB1 JASPAR yes 9208376
chr16 3221212 3221222 NFKB1 JASPAR yes 49329540
chr16 3221212 3221223 NFKB1 JASPAR yes 9208377
chr16 3221212 3221223 NFKB1 JASPAR yes 49329541
chr16 3221237 3221257 RREB1 JASPAR yes 9208378
chr16 3221237 3221257 RREB1 JASPAR yes 49329542
chr16 3221245 3221255 SP1 JASPAR yes 9208379
chr16 3221245 3221255 SP1 JASPAR yes 49329543
chr16 3221245 3221265 RREB1 JASPAR yes 9208380
chr16 3221245 3221265 RREB1 JASPAR yes 49329544
chr16 3221247 3221252 SP1 TRANSFAC yes 9208381
chr16 3221247 3221252 SP1 TRANSFAC yes 49329545
chr16 3221262 3221266 LFA1 TRANSFAC yes 9208382
chr16 3221262 3221266 LFA1 TRANSFAC yes 49329546
chr16 3221271 3221277 SP1 TRANSFAC yes 9208383
chr16 3221271 3221277 SP1 TRANSFAC yes 49329547
chr16 3221271 3221281 SP1 TRANSFAC yes 9208384
chr16 3221271 3221281 SP1 TRANSFAC yes 49329548
chr16 3221272 3221277 SP1 TRANSFAC yes 9208385
chr16 3221272 3221277 SP1 TRANSFAC yes 49329549
chr16 3221273 3221278 SP1 TRANSFAC yes 9208386
chr16 3221273 3221278 SP1 TRANSFAC yes 49329550
chr16 3221276 3221281 SP1 TRANSFAC yes 9208387
chr16 3221276 3221281 SP1 TRANSFAC yes 49329551
chr16 3221293 3221297 LFA1 TRANSFAC yes 9208388
chr16 3221293 3221297 LFA1 TRANSFAC yes 49329552
chr16 3221306 3221318 ZBTB7B JASPAR yes 9208389
chr16 3221306 3221318 ZBTB7C JASPAR yes 9208390
chr16 3221306 3221318 ZBTB7B JASPAR yes 49329553
chr16 3221306 3221318 ZBTB7C JASPAR yes 49329554
chr16 3221347 3221365 ESR1 JASPAR yes 9208391
chr16 3221347 3221365 ESR1 JASPAR yes 49329555
chr16 3221360 3221370 RELA JASPAR yes 9208392
chr16 3221360 3221370 RELA JASPAR yes 49329556
chr16 3221380 3221384 H4TF2 TRANSFAC yes 9208393
chr16 3221380 3221384 H4TF2 TRANSFAC yes 49329557
chr16 3221395 3221408 SCRT2 JASPAR yes 9208394
chr16 3221395 3221408 SCRT2 JASPAR yes 49329558
chr16 3221395 3221410 SCRT1 JASPAR yes 9208395
chr16 3221395 3221410 SCRT1 JASPAR yes 49329559
chr16 3221399 3221409 MSC JASPAR yes 9208396
chr16 3221399 3221409 MSC JASPAR yes 49329560
chr16 3221407 3221416 RUNX2 JASPAR yes 9208397
chr16 3221407 3221416 RUNX2 JASPAR yes 49329561
chr16 3221429 3221440 ESRRA JASPAR yes 9208398
chr16 3221429 3221440 ESRRB JASPAR yes 9208399
chr16 3221429 3221440 ESRRA JASPAR yes 49329562
chr16 3221429 3221440 ESRRB JASPAR yes 49329563
chr16 3221430 3221445 TFAP2A JASPAR yes 9208400
chr16 3221430 3221445 TFAP2A JASPAR yes 49329564
chr16 3221432 3221447 TFAP2A JASPAR yes 9208401
chr16 3221432 3221447 TFAP2C JASPAR yes 9208402
chr16 3221432 3221447 TFAP2A JASPAR yes 49329565
chr16 3221432 3221447 TFAP2C JASPAR yes 49329566
chr16 3221433 3221444 TFAP2A JASPAR yes 9208403
chr16 3221433 3221444 TFAP2B JASPAR yes 9208404
chr16 3221433 3221444 TFAP2A JASPAR yes 49329567
chr16 3221433 3221444 TFAP2B JASPAR yes 49329568
chr16 3221461 3221464 MYB TRANSFAC yes 9208405
chr16 3221461 3221464 MYB TRANSFAC yes 49329569
chr16 3221461 3221470 RUNX2 JASPAR yes 9208406
chr16 3221461 3221470 RUNX2 JASPAR yes 49329570
chr16 3221461 3221471 RUNX3 JASPAR yes 9208407
chr16 3221461 3221471 RUNX3 JASPAR yes 49329571
chr16 3221461 3221472 RUNX1 JASPAR yes 9208408
chr16 3221461 3221472 RUNX1 JASPAR yes 49329572
chr16 3221468 3221483 RUNX2 JASPAR yes 9208409
chr16 3221468 3221483 RUNX2 JASPAR yes 49329573
chr16 3221469 3221478 RUNX2 JASPAR yes 9208410
chr16 3221469 3221478 RUNX2 JASPAR yes 49329574
chr16 3221469 3221479 RUNX3 JASPAR yes 9208411
chr16 3221469 3221479 RUNX3 JASPAR yes 49329575
chr16 3221483 3221504 IRF1 JASPAR yes 9208412
chr16 3221483 3221504 IRF1 JASPAR yes 49329576
chr16 3221487 3221502 PRDM1 JASPAR yes 9208413
chr16 3221487 3221502 PRDM1 JASPAR yes 49329577
chr16 3221489 3221510 IRF1 JASPAR yes 9208414
chr16 3221489 3221510 IRF1 JASPAR yes 49329578
chr16 3221495 3221516 IRF1 JASPAR yes 9208415
chr16 3221495 3221516 IRF1 JASPAR yes 49329579
chr16 3221497 3221512 IRF9 JASPAR yes 9208416
chr16 3221497 3221512 IRF9 JASPAR yes 49329580
chr16 3221498 3221512 IRF8 JASPAR yes 9208417
chr16 3221498 3221512 IRF8 JASPAR yes 49329581
chr16 3221499 3221513 STAT1 JASPAR yes 9208418
chr16 3221499 3221513 STAT1 JASPAR yes 49329582
chr16 3221499 3221514 STAT2 JASPAR yes 9208419
chr16 3221499 3221514 STAT2 JASPAR yes 49329583
SNP sites on vista21608[chr16:3221173-3221513]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 3221381 rs8044008 G C
H4TF2 RUNX3
4267880
chr16 3221459 rs186496063 T G
RUNX3
4267881
chr16 3221475 rs34305081 A AC
RUNX2 RUNX3
4267882
chr16 3221475 rs397745688 A AC
RUNX2 RUNX3
4267883
chr16 3221512 rs116056978 G C
IRF1 IRF8 IRF9 RUNX3 STAT1 STAT2
4267884
Genes possibly regulated by vista21608[chr16:3221173-3221513]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 3138891 3149318 - ZSCAN10 ENSG00000130182.3 3149318 0.88 0.99 14468 28145
chr16 3162561 3170518 + ZNF205 ENSG00000122386.6 3162561 0.62 1.0 14469 41388
chr16 3179778 3192806 + ZNF213 ENSG00000085644.9 3179778 0.61 1.0 14470 58605
chr16 3194220 3199964 + CASP16 ENSG00000228146.2 3194220 0.97 1.0 14471 73047
chr16 3254247 3255188 + OR1F1 ENSG00000168124.2 3254247 1.0 0.89 14472 67266
chr16 3272325 3286221 - ZNF200 ENSG00000010539.7 3286221 0.59 0.99 14473 35292
chr16 3292028 3306627 - MEFV ENSG00000103313.7 3306627 0.96 0.95 14474 14886
chr16 3313743 3351401 + ZNF263 ENSG00000006194.6 3313743 0.69 0.99 14475 7770
Expression level of Genes
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miRNAs possibly regulated by vista21608[chr16:3221173-3221513]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results