EnhancerDB
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  3. vista21609[chr16:3230630-3231003]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21609[chr16:3230630-3231003]
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Tissue distribution of vista21609
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Transcription factor that possibly regulate vista21609[chr16:3230630-3231003]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 3230361 3230792 RPC155 UCSC Txn Factor no Conserved 108175213
chr16 3230412 3230780 ATF3 UCSC Txn Factor no Conserved 108175216
chr16 3230452 3230825 TBP UCSC Txn Factor no Conserved 108175221
chr16 3230639 3230651 POU3F1 JASPAR yes 49329584
chr16 3230639 3230651 POU3F2 JASPAR yes 49329585
chr16 3230641 3230648 NFATC2 JASPAR yes 49329586
chr16 3230655 3230675 PPARG JASPAR yes 49329587
chr16 3230666 3230680 PLAG1 JASPAR yes 49329588
chr16 3230667 3230682 TFAP2A JASPAR yes 49329589
chr16 3230667 3230682 TFAP2C JASPAR yes 49329590
chr16 3230676 3230697 ZNF263 JASPAR yes 49329591
chr16 3230681 3230689 FOXO3 JASPAR yes 49329592
chr16 3230685 3230699 SPIC JASPAR yes 49329593
chr16 3230686 3230692 SOX10 JASPAR yes 49329594
chr16 3230694 3230708 JUN JASPAR yes 49329595
chr16 3230696 3230707 BATF JASPAR yes 49329596
chr16 3230698 3230709 FOS JASPAR yes 49329597
chr16 3230698 3230709 JUND JASPAR yes 49329598
chr16 3230698 3230709 NFE2 JASPAR yes 49329599
chr16 3230699 3230710 FOSL2 JASPAR yes 49329600
chr16 3230699 3230710 JUNB JASPAR yes 49329601
chr16 3230699 3230713 JUN JASPAR yes 49329602
chr16 3230700 3230706 JUN TRANSFAC yes 49329603
chr16 3230729 3230740 NFKB1 JASPAR yes 49329604
chr16 3230732 3230736 H4TF2 TRANSFAC yes 49329605
chr16 3230761 3230773 HINFP JASPAR yes 49329606
chr16 3230779 3230790 NFKB1 JASPAR yes 49329607
chr16 3230781 3230786 H4TF1 TRANSFAC yes 49329608
chr16 3230802 3230820 SRF JASPAR yes 49329609
chr16 3230804 3230820 SRF JASPAR yes 49329610
chr16 3230804 3230822 SRF JASPAR yes 49329611
chr16 3230805 3230817 SRF JASPAR yes 49329612
chr16 3230902 3230923 IRF1 JASPAR yes 49329613
chr16 3230905 3230919 IRF7 JASPAR yes 49329614
chr16 3230908 3230923 FOXP1 JASPAR yes 49329615
chr16 3230941 3230950 NKX3-2 JASPAR yes 49329616
chr16 3230941 3230951 NKX2-3 JASPAR yes 49329617
chr16 3230942 3230950 ISL2 JASPAR yes 49329618
chr16 3230942 3230951 NKX2-8 JASPAR yes 49329619
chr16 3230959 3230975 RFX3 JASPAR yes 49329620
chr16 3230959 3230975 RFX4 JASPAR yes 49329621
chr16 3230960 3230979 RFX2 JASPAR yes 49329622
chr16 3230965 3230974 NFIX JASPAR yes 49329623
chr16 3230966 3230972 NFIC JASPAR yes 49329624
chr16 3230970 3230991 IRF1 JASPAR yes 49329625
chr16 3230972 3230993 IRF1 JASPAR yes 49329626
chr16 3230973 3230994 IRF1 JASPAR yes 49329627
chr16 3230974 3230989 FOXP1 JASPAR yes 49329628
chr16 3230974 3230995 IRF1 JASPAR yes 49329629
chr16 3230975 3230990 FOXP1 JASPAR yes 49329630
chr16 3230975 3230996 IRF1 JASPAR yes 49329631
chr16 3230976 3230991 FOXP1 JASPAR yes 49329632
chr16 3230976 3230997 IRF1 JASPAR yes 49329633
chr16 3230977 3230992 FOXP1 JASPAR yes 49329634
chr16 3230977 3230998 IRF1 JASPAR yes 49329635
chr16 3230978 3230993 FOXP1 JASPAR yes 49329636
chr16 3230978 3230999 IRF1 JASPAR yes 49329637
chr16 3230979 3230994 FOXP1 JASPAR yes 49329638
chr16 3230979 3231000 IRF1 JASPAR yes 49329639
chr16 3230980 3230995 FOXP1 JASPAR yes 49329640
chr16 3230980 3231001 IRF1 JASPAR yes 49329641
chr16 3230981 3230996 FOXP1 JASPAR yes 49329642
chr16 3230981 3231002 IRF1 JASPAR yes 49329643
chr16 3230982 3230997 FOXP1 JASPAR yes 49329644
chr16 3230983 3230998 FOXP1 JASPAR yes 49329645
chr16 3230984 3230999 FOXP1 JASPAR yes 49329646
chr16 3230985 3231000 FOXP1 JASPAR yes 49329647
chr16 3230986 3231001 FOXP1 JASPAR yes 49329648
chr16 3230987 3231002 FOXP1 JASPAR yes 49329649
chr16 3230988 3231003 FOXP1 JASPAR yes 49329650
SNP sites on vista21609[chr16:3230630-3231003]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 3230636 rs77365169 A C,G,T
ATF3 RPC155 TBP
4267992
chr16 3230697 rs137990737 G T
ATF3 BATF JUN RPC155 SPIC TBP ZNF263
4267993
chr16 3230854 rs61300694 G T no 4267994
chr16 3230888 rs1076573 T G no 4267995
chr16 3230910 rs142084571 AAG A
FOXP1 IRF1 IRF7
4267996
chr16 3230910 rs796721664 AAG A
FOXP1 IRF1 IRF7
4267997
chr16 3230915 rs60314653 A G
FOXP1 IRF1 IRF7
4267998
chr16 3230976 rs561390785 CTTTTTTTTTTTTTTT C
FOXP1 IRF1 RFX2
4267999
Genes possibly regulated by vista21609[chr16:3230630-3231003]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 3138891 3149318 - ZSCAN10 ENSG00000130182.3 3149318 0.88 0.99 14468 18688
chr16 3162561 3170518 + ZNF205 ENSG00000122386.6 3162561 0.62 1.0 14469 31931
chr16 3179778 3192806 + ZNF213 ENSG00000085644.9 3179778 0.61 1.0 14470 49148
chr16 3194220 3199964 + CASP16 ENSG00000228146.2 3194220 0.97 1.0 14471 63590
chr16 3254247 3255188 + OR1F1 ENSG00000168124.2 3254247 1.0 0.89 14472 76756
chr16 3272325 3286221 - ZNF200 ENSG00000010539.7 3286221 0.59 0.99 14473 44782
chr16 3292028 3306627 - MEFV ENSG00000103313.7 3306627 0.96 0.95 14474 24376
chr16 3313743 3351401 + ZNF263 ENSG00000006194.6 3313743 0.69 0.99 14475 17260
Expression level of Genes
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miRNAs possibly regulated by vista21609[chr16:3230630-3231003]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results