EnhancerDB
  1. Home
  2. Enhancers
  3. vista21611[chr16:3240888-3241090]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21611[chr16:3240888-3241090]
Back to top
Tissue distribution of vista21611
Back to top
Transcription factor that possibly regulate vista21611[chr16:3240888-3241090]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 3240885 3240896 CDX2 JASPAR yes 9209925
chr16 3240885 3240896 CDX2 JASPAR yes 49329782
chr16 3240886 3240897 HOXA10 JASPAR yes 9209926
chr16 3240886 3240897 HOXA10 JASPAR yes 49329783
chr16 3240887 3240896 CDX1 JASPAR yes 9209927
chr16 3240887 3240896 CDX1 JASPAR yes 49329784
chr16 3240887 3240897 HOXA13 JASPAR yes 9209928
chr16 3240887 3240897 HOXA13 JASPAR yes 49329785
chr16 3240892 3240903 FOXC1 JASPAR yes 9209929
chr16 3240892 3240903 FOXC1 JASPAR yes 49329786
chr16 3240898 3240914 RFX4 JASPAR yes 9209930
chr16 3240898 3240914 RFX4 JASPAR yes 49329787
chr16 3240899 3240918 RFX2 JASPAR yes 9209931
chr16 3240899 3240918 RFX2 JASPAR yes 49329788
chr16 3240919 3240927 FOXL1 JASPAR yes 9209932
chr16 3240919 3240927 FOXL1 JASPAR yes 49329789
chr16 3240919 3240928 POU5F1B JASPAR yes 9209933
chr16 3240919 3240928 POU5F1B JASPAR yes 49329790
chr16 3240931 3240945 RXRB JASPAR yes 9209934
chr16 3240931 3240945 RXRG JASPAR yes 9209935
chr16 3240931 3240945 RXRB JASPAR yes 49329791
chr16 3240931 3240945 RXRG JASPAR yes 49329792
chr16 3240931 3240946 LEF1 JASPAR yes 9209936
chr16 3240931 3240946 LEF1 JASPAR yes 49329793
chr16 3240932 3240946 TCF7L2 JASPAR yes 9209937
chr16 3240932 3240946 TCF7L2 JASPAR yes 49329794
chr16 3240938 3240953 HSF1 JASPAR yes 9209938
chr16 3240938 3240953 HSF1 JASPAR yes 49329795
chr16 3240939 3240952 HSF1 JASPAR yes 9209939
chr16 3240939 3240952 HSF2 JASPAR yes 9209940
chr16 3240939 3240952 HSF4 JASPAR yes 9209941
chr16 3240939 3240952 HSF1 JASPAR yes 49329796
chr16 3240939 3240952 HSF2 JASPAR yes 49329797
chr16 3240939 3240952 HSF4 JASPAR yes 49329798
chr16 3240950 3240955 MYB TRANSFAC yes 9209942
chr16 3240950 3240955 MYB TRANSFAC yes 49329799
chr16 3240958 3240974 SOX4 JASPAR yes 9209943
chr16 3240958 3240974 SOX4 JASPAR yes 49329800
chr16 3240966 3240979 HSF2 JASPAR yes 9209944
chr16 3240966 3240979 HSF2 JASPAR yes 49329801
chr16 3240970 3240985 MEF2C JASPAR yes 9209945
chr16 3240970 3240985 MEF2C JASPAR yes 49329802
chr16 3240971 3240986 MEF2A JASPAR yes 9209946
chr16 3240971 3240986 MEF2A JASPAR yes 49329803
chr16 3240978 3240982 TEAD2 TRANSFAC yes 9209947
chr16 3240978 3240982 TEAD2 TRANSFAC yes 49329804
chr16 3240978 3240983 TBP TRANSFAC yes 9209948
chr16 3240978 3240983 TBP TRANSFAC yes 49329805
chr16 3240978 3240984 TFIID TRANSFAC yes 9209949
chr16 3240978 3240984 TFIID TRANSFAC yes 49329806
chr16 3241018 3241023 ATF1 TRANSFAC yes 9209950
chr16 3241018 3241023 ATF1 TRANSFAC yes 49329807
chr16 3241044 3241056 PKNOX1 JASPAR yes 9209951
chr16 3241044 3241056 PKNOX2 JASPAR yes 9209952
chr16 3241044 3241056 PKNOX1 JASPAR yes 49329808
chr16 3241044 3241056 PKNOX2 JASPAR yes 49329809
chr16 3241045 3241055 ID4 JASPAR yes 9209953
chr16 3241045 3241055 TCF3 JASPAR yes 9209954
chr16 3241045 3241055 TCF4 JASPAR yes 9209955
chr16 3241045 3241055 ID4 JASPAR yes 49329810
chr16 3241045 3241055 TCF3 JASPAR yes 49329811
chr16 3241045 3241055 TCF4 JASPAR yes 49329812
chr16 3241046 3241055 SNAI2 JASPAR yes 9209956
chr16 3241046 3241055 SNAI2 JASPAR yes 49329813
chr16 3241047 3241052 USF2 TRANSFAC yes 9209957
chr16 3241047 3241052 USF2 TRANSFAC yes 49329814
chr16 3241065 3241082 RARA JASPAR yes 9209958
chr16 3241065 3241082 RARA JASPAR yes 49329815
SNP sites on vista21611[chr16:3240888-3241090]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 3240921 rs78137198 A G
FOXL1 POU5F1B
4268184
chr16 3240925 rs80173777 A G
FOXL1 POU5F1B
4268185
chr16 3240961 rs382077 C G
SOX4
4268186
chr16 3241015 rs366494 A G no 4268187
chr16 3241021 rs138919622 G A
ATF1
4268188
chr16 3241047 rs112107308 A T
ID4 PKNOX1 PKNOX2 SNAI2 TCF3 TCF4 USF2
4268189
Genes possibly regulated by vista21611[chr16:3240888-3241090]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 3138891 3149318 - ZSCAN10 ENSG00000130182.3 3149318 0.88 0.99 14468 8430
chr16 3162561 3170518 + ZNF205 ENSG00000122386.6 3162561 0.62 1.0 14469 21673
chr16 3179778 3192806 + ZNF213 ENSG00000085644.9 3179778 0.61 1.0 14470 38890
chr16 3194220 3199964 + CASP16 ENSG00000228146.2 3194220 0.97 1.0 14471 53332
chr16 3254247 3255188 + OR1F1 ENSG00000168124.2 3254247 1.0 0.89 14472 86843
chr16 3272325 3286221 - ZNF200 ENSG00000010539.7 3286221 0.59 0.99 14473 54869
chr16 3292028 3306627 - MEFV ENSG00000103313.7 3306627 0.96 0.95 14474 34463
chr16 3313743 3351401 + ZNF263 ENSG00000006194.6 3313743 0.69 0.99 14475 27347
Expression level of Genes
Back to top
miRNAs possibly regulated by vista21611[chr16:3240888-3241090]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results