EnhancerDB
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  3. vista21620[chr16:3730332-3730635]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21620[chr16:3730332-3730635]
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Tissue distribution of vista21620
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Transcription factor that possibly regulate vista21620[chr16:3730332-3730635]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 3730350 3730361 FOXC1 JASPAR yes 49330171
chr16 3730350 3730362 FOXC2 JASPAR yes 49330172
chr16 3730367 3730376 VENTX JASPAR yes 49330173
chr16 3730367 3730377 EN2 JASPAR yes 49330174
chr16 3730367 3730377 GBX1 JASPAR yes 49330175
chr16 3730367 3730377 GBX2 JASPAR yes 49330176
chr16 3730367 3730377 HOXB3 JASPAR yes 49330177
chr16 3730368 3730376 BARX1 JASPAR yes 49330178
chr16 3730368 3730376 EN1 JASPAR yes 49330179
chr16 3730368 3730376 ISL2 JASPAR yes 49330180
chr16 3730368 3730376 MSX1 JASPAR yes 49330181
chr16 3730368 3730376 MSX2 JASPAR yes 49330182
chr16 3730368 3730376 PDX1 JASPAR yes 49330183
chr16 3730396 3730409 ZBTB18 JASPAR yes 49330184
chr16 3730421 3730442 REST JASPAR yes 49330185
chr16 3730422 3730441 REST JASPAR yes 49330186
chr16 3730438 3730443 TFAP2A TRANSFAC yes 49330187
chr16 3730438 3730444 MZF1 JASPAR yes 49330188
chr16 3730448 3730467 CTCF JASPAR yes 49330189
chr16 3730484 3730495 BATF JASPAR yes 49330190
chr16 3730497 3730510 ELF1 JASPAR yes 49330191
chr16 3730498 3730510 EHF JASPAR yes 49330192
chr16 3730498 3730510 ELF1 JASPAR yes 49330193
chr16 3730498 3730510 ELF4 JASPAR yes 49330194
chr16 3730498 3730511 ELF3 JASPAR yes 49330195
chr16 3730499 3730510 ELF5 JASPAR yes 49330196
chr16 3730500 3730507 ETS1 TRANSFAC yes 49330197
chr16 3730500 3730511 FLI1 JASPAR yes 49330198
chr16 3730506 3730515 SNAI2 JASPAR yes 49330199
chr16 3730506 3730516 FIGLA JASPAR yes 49330200
chr16 3730506 3730516 ID4 JASPAR yes 49330201
chr16 3730506 3730516 MSC JASPAR yes 49330202
chr16 3730506 3730516 MYF6 JASPAR yes 49330203
chr16 3730506 3730516 TCF3 JASPAR yes 49330204
chr16 3730506 3730516 TCF4 JASPAR yes 49330205
chr16 3730527 3730541 MTF1 JASPAR yes 49330206
chr16 3730556 3730571 RFX5 JASPAR yes 49330207
chr16 3730568 3730577 HIC2 JASPAR yes 49330208
chr16 3730571 3730575 LFA1 TRANSFAC yes 49330209
chr16 3730589 3730598 THAP1 JASPAR yes 49330210
chr16 3730592 3730597 ETS2 TRANSFAC yes 49330211
chr16 3730621 3730625 NFE TRANSFAC yes 49330212
chr16 3730621 3730626 GATA1 TRANSFAC yes 49330213
chr16 3730621 3730627 GATA3 JASPAR yes 49330214
chr16 3730630 3730634 NFE TRANSFAC yes 49330215
SNP sites on vista21620[chr16:3730332-3730635]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 3730431 rs185998766 T G
REST
4270452
chr16 3730461 rs12446102 G A
CTCF
4270453
chr16 3730499 rs3829541 C G
EHF ELF1 ELF3 ELF4 ELF5
4270454
chr16 3730578 rs3794701 A G no 4270455
chr16 3730592 rs150239995 C A,T
ETS2 THAP1
4270456
chr16 3730613 rs3794702 T A no 4270457
Genes possibly regulated by vista21620[chr16:3730332-3730635]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 3631182 3661599 - SLX4 ENSG00000188827.6 3661599 0.62 1.0 14487 31267
chr16 3661729 3730144 + DNASE1 ENSG00000213918.6 3661729 0.86 1.0 14488 31397
chr16 3701640 3767598 - TRAP1 ENSG00000126602.6 3767598 0.81 1.0 14489 63037
Expression level of Genes
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miRNAs possibly regulated by vista21620[chr16:3730332-3730635]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results