EnhancerDB
  1. Home
  2. Enhancers
  3. vista21623[chr16:3858926-3859164]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21623[chr16:3858926-3859164]
Back to top
Tissue distribution of vista21623
Back to top
Transcription factor that possibly regulate vista21623[chr16:3858926-3859164]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 3858934 3858938 YY1 TRANSFAC yes 9230683
chr16 3858934 3858938 YY1 TRANSFAC yes 49330240
chr16 3858935 3858949 RORA JASPAR yes 9230684
chr16 3858935 3858949 RORA JASPAR yes 49330241
chr16 3858938 3858948 RORA JASPAR yes 9230685
chr16 3858938 3858948 RORA JASPAR yes 49330242
chr16 3858943 3858947 ESR1 TRANSFAC yes 9230686
chr16 3858943 3858947 ESR1 TRANSFAC yes 49330243
chr16 3858953 3858964 STAT1 JASPAR yes 9230687
chr16 3858953 3858964 STAT1 JASPAR yes 49330244
chr16 3858981 3858985 H4TF2 TRANSFAC yes 9230688
chr16 3858981 3858985 H4TF2 TRANSFAC yes 49330245
chr16 3858990 3859011 REST JASPAR yes 9230689
chr16 3858990 3859011 REST JASPAR yes 49330246
chr16 3858991 3859010 REST JASPAR yes 9230690
chr16 3858991 3859010 REST JASPAR yes 49330247
chr16 3858993 3859008 STAT2 JASPAR yes 9230691
chr16 3858993 3859008 STAT2 JASPAR yes 49330248
chr16 3858994 3859008 STAT1 JASPAR yes 9230692
chr16 3858994 3859008 STAT1 JASPAR yes 49330249
chr16 3858995 3859010 IRF9 JASPAR yes 9230693
chr16 3858995 3859010 IRF9 JASPAR yes 49330250
chr16 3859017 3859021 NFE TRANSFAC yes 9230694
chr16 3859017 3859021 NFE TRANSFAC yes 49330251
chr16 3859033 3859048 RFX5 JASPAR yes 9230695
chr16 3859033 3859048 RFX5 JASPAR yes 49330252
chr16 3859048 3859063 STAT1 JASPAR yes 9230696
chr16 3859048 3859063 STAT1 JASPAR yes 49330253
chr16 3859050 3859061 STAT1 JASPAR yes 9230697
chr16 3859050 3859061 STAT3 JASPAR yes 9230698
chr16 3859050 3859061 STAT1 JASPAR yes 49330254
chr16 3859050 3859061 STAT3 JASPAR yes 49330255
chr16 3859071 3859086 PRDM1 JASPAR yes 9230699
chr16 3859071 3859086 PRDM1 JASPAR yes 49330256
chr16 3859075 3859080 ETS2 TRANSFAC yes 9230700
chr16 3859075 3859080 ETS2 TRANSFAC yes 49330257
chr16 3859089 3859099 GSC2 JASPAR yes 9230701
chr16 3859089 3859099 GSC JASPAR yes 9230702
chr16 3859089 3859099 GSC2 JASPAR yes 49330258
chr16 3859089 3859099 GSC JASPAR yes 49330259
chr16 3859090 3859098 RHOXF1 JASPAR yes 9230703
chr16 3859090 3859098 RHOXF1 JASPAR yes 49330260
chr16 3859090 3859099 PITX3 JASPAR yes 9230704
chr16 3859090 3859099 PITX3 JASPAR yes 49330261
chr16 3859103 3859117 SPI1 JASPAR yes 9230705
chr16 3859103 3859117 SPI1 JASPAR yes 49330262
chr16 3859130 3859141 FOXP2 JASPAR yes 9230706
chr16 3859130 3859141 FOXP2 JASPAR yes 49330263
chr16 3859131 3859142 FOXC1 JASPAR yes 9230707
chr16 3859131 3859142 FOXC1 JASPAR yes 49330264
chr16 3859132 3859140 FOXO3 JASPAR yes 9230708
chr16 3859132 3859140 FOXO3 JASPAR yes 49330265
chr16 3859132 3859143 FOXA1 JASPAR yes 9230709
chr16 3859132 3859143 FOXA1 JASPAR yes 49330266
chr16 3859156 3859162 TCF4 TRANSFAC yes 9230710
chr16 3859156 3859162 TCF4 TRANSFAC yes 49330267
SNP sites on vista21623[chr16:3858926-3859164]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 3858953 rs147477808 C A,T
STAT1
4271026
chr16 3859042 rs79247998 C T
RFX5
4271027
Genes possibly regulated by vista21623[chr16:3858926-3859164]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 3701640 3767598 - TRAP1 ENSG00000126602.6 3767598 0.81 1.0 14489 8672
chr16 3775055 3930727 - CREBBP ENSG00000005339.8 3930727 0.69 1.0 14490 28437
Expression level of Genes
Back to top
miRNAs possibly regulated by vista21623[chr16:3858926-3859164]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results