EnhancerDB
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  3. vista21624[chr16:3889135-3889287]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21624[chr16:3889135-3889287]
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Tissue distribution of vista21624
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Transcription factor that possibly regulate vista21624[chr16:3889135-3889287]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 3889135 3889156 IRF1 JASPAR yes 9233177
chr16 3889135 3889156 IRF1 JASPAR yes 49330268
chr16 3889137 3889152 IRF9 JASPAR yes 9233178
chr16 3889137 3889152 IRF9 JASPAR yes 49330269
chr16 3889139 3889154 STAT2 JASPAR yes 9233179
chr16 3889139 3889154 STAT2 JASPAR yes 49330270
chr16 3889140 3889152 IRF1 JASPAR yes 9233180
chr16 3889140 3889152 IRF1 JASPAR yes 49330271
chr16 3889177 3889192 HNF1A JASPAR yes 9233181
chr16 3889177 3889192 HNF1A JASPAR yes 49330272
chr16 3889178 3889191 HNF1B JASPAR yes 9233182
chr16 3889178 3889191 HNF1B JASPAR yes 49330273
chr16 3889181 3889191 EMX1 JASPAR yes 9233183
chr16 3889181 3889191 EMX2 JASPAR yes 9233184
chr16 3889181 3889191 GSX1 JASPAR yes 9233185
chr16 3889181 3889191 HOXB3 JASPAR yes 9233186
chr16 3889181 3889191 LHX2 JASPAR yes 9233187
chr16 3889181 3889191 LHX6 JASPAR yes 9233188
chr16 3889181 3889191 MEOX1 JASPAR yes 9233189
chr16 3889181 3889191 MEOX2 JASPAR yes 9233190
chr16 3889181 3889191 POU6F1 JASPAR yes 9233191
chr16 3889181 3889191 EMX1 JASPAR yes 49330274
chr16 3889181 3889191 EMX2 JASPAR yes 49330275
chr16 3889181 3889191 GSX1 JASPAR yes 49330276
chr16 3889181 3889191 HOXB3 JASPAR yes 49330277
chr16 3889181 3889191 LHX2 JASPAR yes 49330278
chr16 3889181 3889191 LHX6 JASPAR yes 49330279
chr16 3889181 3889191 MEOX1 JASPAR yes 49330280
chr16 3889181 3889191 MEOX2 JASPAR yes 49330281
chr16 3889181 3889191 POU6F1 JASPAR yes 49330282
chr16 3889182 3889190 LBX1 JASPAR yes 9233192
chr16 3889182 3889190 PDX1 JASPAR yes 9233193
chr16 3889182 3889190 VAX1 JASPAR yes 9233194
chr16 3889182 3889190 VAX2 JASPAR yes 9233195
chr16 3889182 3889190 VSX1 JASPAR yes 9233196
chr16 3889182 3889190 VSX2 JASPAR yes 9233197
chr16 3889182 3889190 LBX1 JASPAR yes 49330283
chr16 3889182 3889190 PDX1 JASPAR yes 49330284
chr16 3889182 3889190 VAX1 JASPAR yes 49330285
chr16 3889182 3889190 VAX2 JASPAR yes 49330286
chr16 3889182 3889190 VSX1 JASPAR yes 49330287
chr16 3889182 3889190 VSX2 JASPAR yes 49330288
chr16 3889184 3889192 HOXA5 JASPAR yes 9233198
chr16 3889184 3889192 HOXA5 JASPAR yes 49330289
chr16 3889201 3889222 MAFG JASPAR yes 9233199
chr16 3889201 3889222 MAFG JASPAR yes 49330290
chr16 3889202 3889216 JUN JASPAR yes 9233200
chr16 3889202 3889216 JUN JASPAR yes 49330291
chr16 3889204 3889215 BATF JASPAR yes 9233201
chr16 3889204 3889215 BATF JASPAR yes 49330292
chr16 3889205 3889216 JUNB JASPAR yes 9233202
chr16 3889205 3889216 JUNB JASPAR yes 49330293
chr16 3889206 3889217 FOS JASPAR yes 9233203
chr16 3889206 3889217 FOSL1 JASPAR yes 9233204
chr16 3889206 3889217 JUND JASPAR yes 9233205
chr16 3889206 3889217 FOS JASPAR yes 49330294
chr16 3889206 3889217 FOSL1 JASPAR yes 49330295
chr16 3889206 3889217 JUND JASPAR yes 49330296
chr16 3889206 3889224 MAFF JASPAR yes 9233206
chr16 3889206 3889224 MAFF JASPAR yes 49330297
chr16 3889207 3889218 JUNB JASPAR yes 9233207
chr16 3889207 3889218 JUNB JASPAR yes 49330298
chr16 3889207 3889221 JUN JASPAR yes 9233208
chr16 3889207 3889221 JUN JASPAR yes 49330299
chr16 3889207 3889222 MAFK JASPAR yes 9233209
chr16 3889207 3889222 MAFK JASPAR yes 49330300
chr16 3889208 3889215 JUN TRANSFAC yes 9233210
chr16 3889208 3889215 JUN TRANSFAC yes 49330301
chr16 3889208 3889219 BATF JASPAR yes 9233211
chr16 3889208 3889219 BATF JASPAR yes 49330302
chr16 3889211 3889222 NRL JASPAR yes 9233212
chr16 3889211 3889222 NRL JASPAR yes 49330303
chr16 3889236 3889250 TCF7L2 JASPAR yes 9233213
chr16 3889236 3889250 TCF7L2 JASPAR yes 49330304
chr16 3889245 3889254 VENTX JASPAR yes 9233214
chr16 3889245 3889254 VENTX JASPAR yes 49330305
chr16 3889245 3889255 EN2 JASPAR yes 9233215
chr16 3889245 3889255 GBX1 JASPAR yes 9233216
chr16 3889245 3889255 GBX2 JASPAR yes 9233217
chr16 3889245 3889255 HESX1 JASPAR yes 9233218
chr16 3889245 3889255 HOXB3 JASPAR yes 9233219
chr16 3889245 3889255 LBX2 JASPAR yes 9233220
chr16 3889245 3889255 RAX JASPAR yes 9233221
chr16 3889245 3889255 EN2 JASPAR yes 49330306
chr16 3889245 3889255 GBX1 JASPAR yes 49330307
chr16 3889245 3889255 GBX2 JASPAR yes 49330308
chr16 3889245 3889255 HESX1 JASPAR yes 49330309
chr16 3889245 3889255 HOXB3 JASPAR yes 49330310
chr16 3889245 3889255 LBX2 JASPAR yes 49330311
chr16 3889245 3889255 RAX JASPAR yes 49330312
chr16 3889246 3889254 BARX1 JASPAR yes 9233222
chr16 3889246 3889254 EN1 JASPAR yes 9233223
chr16 3889246 3889254 ISL2 JASPAR yes 9233224
chr16 3889246 3889254 MSX1 JASPAR yes 9233225
chr16 3889246 3889254 MSX2 JASPAR yes 9233226
chr16 3889246 3889254 PDX1 JASPAR yes 9233227
chr16 3889246 3889254 BARX1 JASPAR yes 49330313
chr16 3889246 3889254 EN1 JASPAR yes 49330314
chr16 3889246 3889254 ISL2 JASPAR yes 49330315
chr16 3889246 3889254 MSX1 JASPAR yes 49330316
chr16 3889246 3889254 MSX2 JASPAR yes 49330317
chr16 3889246 3889254 PDX1 JASPAR yes 49330318
chr16 3889269 3889289 ESR1 JASPAR yes 9233228
chr16 3889269 3889289 ESR1 JASPAR yes 49330319
SNP sites on vista21624[chr16:3889135-3889287]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 3889148 rs140338961 A C
IRF1 IRF9 STAT2
4271236
chr16 3889152 rs8046625 C G
IRF1 IRF9 STAT2
4271237
chr16 3889162 rs145496690 T C no 4271238
chr16 3889192 rs73503920 G A
HNF1A HOXA5
4271239
chr16 3889214 rs111831167 C T
BATF FOS FOSL1 JUN JUNB JUND MAFF MAFG MAFK NRL
4271240
Genes possibly regulated by vista21624[chr16:3889135-3889287]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 3775055 3930727 - CREBBP ENSG00000005339.8 3930727 0.69 1.0 14490 58560
Expression level of Genes
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miRNAs possibly regulated by vista21624[chr16:3889135-3889287]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results