EnhancerDB
  1. Home
  2. Enhancers
  3. vista21628[chr16:4010667-4011135]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21628[chr16:4010667-4011135]
Back to top
Tissue distribution of vista21628
Back to top
Transcription factor that possibly regulate vista21628[chr16:4010667-4011135]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 4010771 4011127 IRF1 UCSC Txn Factor no Conserved 108175421
chr16 4010671 4010685 ZIC1 JASPAR yes 49330398
chr16 4010677 4010692 FOXA1 JASPAR yes 49330399
chr16 4010681 4010692 FOXA1 JASPAR yes 49330400
chr16 4010696 4010699 MYB TRANSFAC yes 49330401
chr16 4010711 4010718 NKX3-1 JASPAR yes 49330402
chr16 4010716 4010719 MYB TRANSFAC yes 49330403
chr16 4010752 4010757 GATA2 JASPAR yes 49330404
chr16 4010758 4010768 NFKB1 JASPAR yes 49330405
chr16 4010778 4010794 POU4F2 JASPAR yes 49330406
chr16 4010783 4010796 POU2F2 JASPAR yes 49330407
chr16 4010784 4010799 HNF1A JASPAR yes 49330408
chr16 4010785 4010798 HNF1B JASPAR yes 49330409
chr16 4010791 4010795 YY1 TRANSFAC yes 49330410
chr16 4010794 4010797 MYB TRANSFAC yes 49330411
chr16 4010816 4010820 YY1 TRANSFAC yes 49330412
chr16 4010820 4010826 TBP TRANSFAC yes 49330413
chr16 4010820 4010831 FOXC1 JASPAR yes 49330414
chr16 4010820 4010832 FOXC2 JASPAR yes 49330415
chr16 4010821 4010835 ONECUT3 JASPAR yes 49330416
chr16 4010823 4010832 SRY JASPAR yes 49330417
chr16 4010834 4010848 SPI1 JASPAR yes 49330418
chr16 4010839 4010844 ETS2 TRANSFAC yes 49330419
chr16 4010846 4010861 MEF2C JASPAR yes 49330420
chr16 4010847 4010862 MEF2A JASPAR yes 49330421
chr16 4010848 4010852 TEAD2 TRANSFAC yes 49330422
chr16 4010848 4010853 TBP TRANSFAC yes 49330423
chr16 4010848 4010854 TFIID TRANSFAC yes 49330424
chr16 4010848 4010860 MEF2A JASPAR yes 49330425
chr16 4010848 4010860 MEF2B JASPAR yes 49330426
chr16 4010848 4010860 MEF2D JASPAR yes 49330427
chr16 4010849 4010859 MEF2A JASPAR yes 49330428
chr16 4010865 4010870 ETS2 TRANSFAC yes 49330429
chr16 4010902 4010913 FOXA1 JASPAR yes 49330430
chr16 4010915 4010924 VENTX JASPAR yes 49330431
chr16 4010919 4010930 FLI1 JASPAR yes 49330432
chr16 4010920 4010930 ETV6 JASPAR yes 49330433
chr16 4010920 4010933 ELF1 JASPAR yes 49330434
chr16 4010923 4010930 SPIB JASPAR yes 49330435
chr16 4010940 4010958 IRF2 JASPAR yes 49330436
chr16 4010941 4010962 IRF1 JASPAR yes 49330437
chr16 4010943 4010958 PRDM1 JASPAR yes 49330438
chr16 4010943 4010958 STAT2 JASPAR yes 49330439
chr16 4010944 4010958 ISGF3 TRANSFAC yes 49330440
chr16 4010944 4010958 STAT1 JASPAR yes 49330441
chr16 4010945 4010957 IRF1 JASPAR yes 49330442
chr16 4010945 4010959 IRF7 JASPAR yes 49330443
chr16 4010945 4010959 IRF8 JASPAR yes 49330444
chr16 4010945 4010960 IRF9 JASPAR yes 49330445
chr16 4010976 4010994 ESR1 JASPAR yes 49330446
chr16 4011009 4011023 STAT1 JASPAR yes 49330447
chr16 4011020 4011030 MAX JASPAR yes 49330448
chr16 4011032 4011037 H4TF1 TRANSFAC yes 49330449
chr16 4011036 4011050 TCF7L2 JASPAR yes 49330450
chr16 4011036 4011051 LEF1 JASPAR yes 49330451
chr16 4011037 4011058 IRF1 JASPAR yes 49330452
chr16 4011039 4011054 IRF9 JASPAR yes 49330453
chr16 4011040 4011046 TCF4 TRANSFAC yes 49330454
chr16 4011040 4011054 IRF7 JASPAR yes 49330455
chr16 4011040 4011054 IRF8 JASPAR yes 49330456
chr16 4011041 4011055 STAT1 JASPAR yes 49330457
chr16 4011041 4011056 PRDM1 JASPAR yes 49330458
chr16 4011041 4011056 STAT2 JASPAR yes 49330459
chr16 4011041 4011059 IRF2 JASPAR yes 49330460
chr16 4011048 4011063 RUNX2 JASPAR yes 49330461
chr16 4011049 4011058 RUNX2 JASPAR yes 49330462
chr16 4011049 4011059 RUNX3 JASPAR yes 49330463
chr16 4011049 4011060 RUNX1 JASPAR yes 49330464
chr16 4011071 4011085 MTF1 JASPAR yes 49330465
SNP sites on vista21628[chr16:4010667-4011135]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 4010681 rs375160721 C A
FOXA1 ZIC1
4272205
chr16 4010725 rs138203433 A G no 4272206
chr16 4010807 rs80227196 A G,T
IRF1
4272207
chr16 4010857 rs190999843 T C
IRF1 MEF2A MEF2B MEF2C MEF2D
4272208
chr16 4010893 rs145510790 T C
IRF1
4272209
chr16 4010902 rs138135838 G T
FOXA1 IRF1
4272210
chr16 4010921 rs62036941 C A,G
ELF1 ETV6 FLI1 IRF1 VENTX
4272211
chr16 4010922 rs117821789 G A
ELF1 ETV6 FLI1 IRF1 VENTX
4272212
chr16 4010931 rs79952920 T C
ELF1 IRF1
4272213
chr16 4010992 rs114681035 C G
ESR1 IRF1
4272214
chr16 4011007 rs34287895 TG T
IRF1
4272215
chr16 4011007 rs397714952 TG T
IRF1
4272216
chr16 4011007 rs398078463 TG T
IRF1
4272217
chr16 4011011 rs576849732 G A
IRF1 STAT1
4272218
chr16 4011026 rs113974253 T C
IRF1 MAX
4272219
Genes possibly regulated by vista21628[chr16:4010667-4011135]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 3775055 3930727 - CREBBP ENSG00000005339.8 3930727 0.69 1.0 14490 20060
Expression level of Genes
Back to top
miRNAs possibly regulated by vista21628[chr16:4010667-4011135]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results