EnhancerDB
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  3. vista21828[chr16:11059393-11059782]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21828[chr16:11059393-11059782]
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Tissue distribution of vista21828
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Transcription factor that possibly regulate vista21828[chr16:11059393-11059782]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 11059252 11059804 RUNX3 UCSC Txn Factor no Conserved 108179819
chr16 11059265 11059815 NFIC UCSC Txn Factor no Conserved 108179821
chr16 11059279 11059698 RELA UCSC Txn Factor no Conserved 108179823
chr16 11059317 11059740 EBF1 UCSC Txn Factor no Conserved 108179828
chr16 11059317 11059798 FOXM1 UCSC Txn Factor no Conserved 108179830
chr16 11059334 11059732 ATF2 UCSC Txn Factor no Conserved 108179834
chr16 11059346 11059716 EP300 UCSC Txn Factor no Conserved 108179837
chr16 11059352 11059651 TCF3 UCSC Txn Factor no Conserved 108179839
chr16 11059370 11059701 TCF12 UCSC Txn Factor no Conserved 108179843
chr16 11059388 11059662 BCL11A UCSC Txn Factor no Conserved 108179850
chr16 11059402 11059698 PAX5 UCSC Txn Factor no Conserved 108179854
chr16 11059413 11059417 TEAD2 TRANSFAC yes 9475820
chr16 11059413 11059417 TEAD2 TRANSFAC yes 49339786
chr16 11059415 11059425 PAX7 JASPAR yes 9475821
chr16 11059415 11059425 PAX7 JASPAR yes 49339787
chr16 11059415 11059426 PHOX2A JASPAR yes 9475822
chr16 11059415 11059426 PROP1 JASPAR yes 9475823
chr16 11059415 11059426 PHOX2A JASPAR yes 49339788
chr16 11059415 11059426 PROP1 JASPAR yes 49339789
chr16 11059420 11059424 YY1 TRANSFAC yes 9475824
chr16 11059420 11059424 YY1 TRANSFAC yes 49339790
chr16 11059424 11059427 MYB TRANSFAC yes 9475825
chr16 11059424 11059427 MYB TRANSFAC yes 49339791
chr16 11059436 11059440 LFA1 TRANSFAC yes 9475826
chr16 11059436 11059440 LFA1 TRANSFAC yes 49339792
chr16 11059439 11059443 YY1 TRANSFAC yes 9475827
chr16 11059439 11059443 YY1 TRANSFAC yes 49339793
chr16 11059442 11059454 ZBTB7B JASPAR yes 9475828
chr16 11059442 11059454 ZBTB7B JASPAR yes 49339794
chr16 11059478 11059482 YY1 TRANSFAC yes 9475829
chr16 11059478 11059482 YY1 TRANSFAC yes 49339795
chr16 11059488 11059503 SCRT1 JASPAR yes 9475830
chr16 11059488 11059503 SCRT1 JASPAR yes 49339796
chr16 11059489 11059499 FIGLA JASPAR yes 9475831
chr16 11059489 11059499 ID4 JASPAR yes 9475832
chr16 11059489 11059499 TCF3 JASPAR yes 9475833
chr16 11059489 11059499 TCF4 JASPAR yes 9475834
chr16 11059489 11059499 FIGLA JASPAR yes 49339797
chr16 11059489 11059499 ID4 JASPAR yes 49339798
chr16 11059489 11059499 TCF3 JASPAR yes 49339799
chr16 11059489 11059499 TCF4 JASPAR yes 49339800
chr16 11059490 11059499 SNAI2 JASPAR yes 9475835
chr16 11059490 11059499 SNAI2 JASPAR yes 49339801
chr16 11059490 11059503 SCRT2 JASPAR yes 9475836
chr16 11059490 11059503 SCRT2 JASPAR yes 49339802
chr16 11059491 11059496 USF2 TRANSFAC yes 9475837
chr16 11059491 11059496 USF2 TRANSFAC yes 49339803
chr16 11059492 11059498 PTF TRANSFAC yes 9475838
chr16 11059492 11059498 PTF TRANSFAC yes 49339804
chr16 11059502 11059522 PPARG JASPAR yes 9475839
chr16 11059502 11059522 PPARG JASPAR yes 49339805
chr16 11059529 11059543 EBF1 JASPAR yes 9475840
chr16 11059529 11059543 EBF1 JASPAR yes 49339806
chr16 11059547 11059555 GMEB2 JASPAR yes 9475841
chr16 11059547 11059555 GMEB2 JASPAR yes 49339807
chr16 11059564 11059574 HOXA13 JASPAR yes 9475842
chr16 11059564 11059574 HOXB13 JASPAR yes 9475843
chr16 11059564 11059574 HOXD13 JASPAR yes 9475844
chr16 11059564 11059574 HOXA13 JASPAR yes 49339808
chr16 11059564 11059574 HOXB13 JASPAR yes 49339809
chr16 11059564 11059574 HOXD13 JASPAR yes 49339810
chr16 11059564 11059579 STAT1 JASPAR yes 9475845
chr16 11059564 11059579 STAT1 JASPAR yes 49339811
chr16 11059572 11059586 STAT1 JASPAR yes 9475846
chr16 11059572 11059586 STAT1 JASPAR yes 49339812
chr16 11059578 11059583 GATA2 JASPAR yes 9475847
chr16 11059578 11059583 GATA2 JASPAR yes 49339813
chr16 11059580 11059591 RUNX1 JASPAR yes 9475848
chr16 11059580 11059591 RUNX1 JASPAR yes 49339814
chr16 11059617 11059628 NFKB1 JASPAR yes 9475849
chr16 11059617 11059628 NFKB1 JASPAR yes 49339815
chr16 11059653 11059657 NFE TRANSFAC yes 9475850
chr16 11059653 11059657 NFE TRANSFAC yes 49339816
chr16 11059665 11059679 GLIS2 JASPAR yes 9475851
chr16 11059665 11059679 GLIS3 JASPAR yes 9475852
chr16 11059665 11059679 GLIS2 JASPAR yes 49339817
chr16 11059665 11059679 GLIS3 JASPAR yes 49339818
chr16 11059667 11059687 RREB1 JASPAR yes 9475853
chr16 11059667 11059687 RREB1 JASPAR yes 49339819
chr16 11059672 11059686 GLIS2 JASPAR yes 9475854
chr16 11059672 11059686 GLIS3 JASPAR yes 9475855
chr16 11059672 11059686 ZIC1 JASPAR yes 9475856
chr16 11059672 11059686 GLIS2 JASPAR yes 49339820
chr16 11059672 11059686 GLIS3 JASPAR yes 49339821
chr16 11059672 11059686 ZIC1 JASPAR yes 49339822
chr16 11059672 11059687 ZIC3 JASPAR yes 9475857
chr16 11059672 11059687 ZIC4 JASPAR yes 9475858
chr16 11059672 11059687 ZIC3 JASPAR yes 49339823
chr16 11059672 11059687 ZIC4 JASPAR yes 49339824
chr16 11059674 11059689 RUNX2 JASPAR yes 9475859
chr16 11059674 11059689 RUNX2 JASPAR yes 49339825
chr16 11059682 11059693 BATF JASPAR yes 9475860
chr16 11059682 11059693 BATF JASPAR yes 49339826
chr16 11059703 11059710 NFATC2 JASPAR yes 9475861
chr16 11059703 11059710 NFATC2 JASPAR yes 49339827
chr16 11059704 11059715 NFKB1 JASPAR yes 9475862
chr16 11059704 11059715 NFKB1 JASPAR yes 49339828
chr16 11059705 11059715 NFKB1 JASPAR yes 9475863
chr16 11059705 11059715 REL JASPAR yes 9475864
chr16 11059705 11059715 NFKB1 JASPAR yes 49339829
chr16 11059705 11059715 REL JASPAR yes 49339830
chr16 11059718 11059723 TFAP2A TRANSFAC yes 9475865
chr16 11059718 11059723 TFAP2A TRANSFAC yes 49339831
chr16 11059718 11059724 MZF1 JASPAR yes 9475866
chr16 11059718 11059724 MZF1 JASPAR yes 49339832
chr16 11059725 11059736 E2F6 JASPAR yes 9475867
chr16 11059725 11059736 E2F6 JASPAR yes 49339833
chr16 11059735 11059739 NFE TRANSFAC yes 9475868
chr16 11059735 11059739 NFE TRANSFAC yes 49339834
chr16 11059745 11059760 TFAP2C JASPAR yes 9475869
chr16 11059745 11059760 TFAP2C JASPAR yes 49339835
chr16 11059758 11059768 TFAP4 JASPAR yes 9475870
chr16 11059758 11059768 TFAP4 JASPAR yes 49339836
chr16 11059761 11059774 SMAD2 JASPAR yes 9475871
chr16 11059761 11059774 SMAD2 JASPAR yes 49339837
chr16 11059775 11059780 MYC TRANSFAC yes 9475872
chr16 11059775 11059780 MYC TRANSFAC yes 49339838
SNP sites on vista21828[chr16:11059393-11059782]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 11059563 rs144539576 C T
ATF2 BCL11A EBF1 EP300 FOXM1 NFIC PAX5 RELA RUNX3 TCF12 TCF3
4313028
chr16 11059620 rs79141619 A G
ATF2 BCL11A EBF1 EP300 FOXM1 NFIC NFKB1 PAX5 RELA RUNX3 TCF12 TCF3
4313029
chr16 11059645 rs183765024 C T
ATF2 BCL11A EBF1 EP300 FOXM1 NFIC PAX5 RELA RUNX3 TCF12 TCF3
4313030
chr16 11059776 rs75060925 C G
FOXM1 MYC NFIC RUNX3
4313031
Genes possibly regulated by vista21828[chr16:11059393-11059782]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 10971055 11026079 + CIITA ENSG00000179583.13 10971055 0.85 0.99 14537 11662
chr16 11022748 11036317 - DEXI ENSG00000182108.5 11036317 0.76 1.0 14538 76924
chr16 11038345 11276046 + CLEC16A ENSG00000038532.10 11038345 0.66 1.0 14539 78952
Expression level of Genes
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miRNAs possibly regulated by vista21828[chr16:11059393-11059782]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results