EnhancerDB
  1. Home
  2. Enhancers
  3. vista21838[chr16:11277053-11277355]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21838[chr16:11277053-11277355]
Back to top
Tissue distribution of vista21838
Back to top
Transcription factor that possibly regulate vista21838[chr16:11277053-11277355]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 11276857 11277406 EBF1 UCSC Txn Factor no Conserved 108180400
chr16 11276984 11277424 RELA UCSC Txn Factor no Conserved 108180409
chr16 11276995 11277331 CTCF UCSC Txn Factor no Conserved 108180410
chr16 11277061 11277070 HIC2 JASPAR yes 49340334
chr16 11277071 11277091 ESR1 JASPAR yes 49340335
chr16 11277075 11277093 ESR2 JASPAR yes 49340336
chr16 11277084 11277091 JUN TRANSFAC yes 49340337
chr16 11277092 11277104 TFAP2A JASPAR yes 49340338
chr16 11277097 11277106 HiNF-C TRANSFAC yes 49340339
chr16 11277097 11277107 SP1 JASPAR yes 49340340
chr16 11277098 11277104 SP1 TRANSFAC yes 49340341
chr16 11277099 11277104 SP1 TRANSFAC yes 49340342
chr16 11277100 11277105 SP1 TRANSFAC yes 49340343
chr16 11277100 11277106 SP1 TRANSFAC yes 49340344
chr16 11277103 11277108 SP1 TRANSFAC yes 49340345
chr16 11277104 11277124 TP63 JASPAR yes 49340346
chr16 11277113 11277133 ESR1 JASPAR yes 49340347
chr16 11277114 11277118 LFA1 TRANSFAC yes 49340348
chr16 11277115 11277124 SNAI2 JASPAR yes 49340349
chr16 11277115 11277125 FIGLA JASPAR yes 49340350
chr16 11277115 11277125 TCF3 JASPAR yes 49340351
chr16 11277117 11277134 ESR1 JASPAR yes 49340352
chr16 11277117 11277135 ESR2 JASPAR yes 49340353
chr16 11277118 11277133 ESR2 JASPAR yes 49340354
chr16 11277118 11277138 ESR1 JASPAR yes 49340355
chr16 11277132 11277143 TFAP2A JASPAR yes 49340356
chr16 11277132 11277143 TFAP2B JASPAR yes 49340357
chr16 11277132 11277143 TFAP2C JASPAR yes 49340358
chr16 11277132 11277144 INSM1 JASPAR yes 49340359
chr16 11277132 11277144 TFAP2A JASPAR yes 49340360
chr16 11277132 11277144 TFAP2B JASPAR yes 49340361
chr16 11277132 11277144 TFAP2C JASPAR yes 49340362
chr16 11277138 11277151 NR2F1 JASPAR yes 49340363
chr16 11277139 11277158 CTCF JASPAR yes 49340364
chr16 11277141 11277149 NR4A2 JASPAR yes 49340365
chr16 11277142 11277161 CTCF JASPAR yes 49340366
chr16 11277152 11277157 ETS2 TRANSFAC yes 49340367
chr16 11277171 11277184 ZBTB18 JASPAR yes 49340368
chr16 11277173 11277183 MSC JASPAR yes 49340369
chr16 11277182 11277193 NFKB1 JASPAR yes 49340370
chr16 11277183 11277193 NFKB1 JASPAR yes 49340371
chr16 11277183 11277193 RELA JASPAR yes 49340372
chr16 11277183 11277193 REL JASPAR yes 49340373
chr16 11277188 11277202 PLAG1 JASPAR yes 49340374
chr16 11277189 11277199 SP1 JASPAR yes 49340375
chr16 11277190 11277200 SP1 JASPAR yes 49340376
chr16 11277194 11277215 ZNF263 JASPAR yes 49340377
chr16 11277241 11277253 MYBL1 JASPAR yes 49340378
chr16 11277246 11277249 MYB TRANSFAC yes 49340379
chr16 11277255 11277265 MSC JASPAR yes 49340380
chr16 11277270 11277275 ETS2 TRANSFAC yes 49340381
chr16 11277284 11277295 FOSL2 JASPAR yes 49340382
chr16 11277284 11277295 JUNB JASPAR yes 49340383
chr16 11277284 11277298 JUN JASPAR yes 49340384
chr16 11277285 11277291 JUN TRANSFAC yes 49340385
chr16 11277295 11277305 SREBF2 JASPAR yes 49340386
chr16 11277296 11277311 NR2C2 JASPAR yes 49340387
chr16 11277305 11277315 NFKB1 JASPAR yes 49340388
chr16 11277305 11277319 PLAG1 JASPAR yes 49340389
chr16 11277307 11277324 BCL6B JASPAR yes 49340390
chr16 11277314 11277319 TFAP2A TRANSFAC yes 49340391
chr16 11277314 11277320 MZF1 JASPAR yes 49340392
chr16 11277314 11277327 NFKB1 JASPAR yes 49340393
chr16 11277315 11277325 NFKB1 JASPAR yes 49340394
chr16 11277332 11277345 TFAP2A JASPAR yes 49340395
chr16 11277332 11277345 TFAP2B JASPAR yes 49340396
chr16 11277332 11277345 TFAP2C JASPAR yes 49340397
chr16 11277340 11277344 LFA1 TRANSFAC yes 49340398
SNP sites on vista21838[chr16:11277053-11277355]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 11277081 rs112289654 C T
CTCF EBF1 ESR1 ESR2 RELA
4315149
chr16 11277118 rs744380 C T
CTCF EBF1 ESR1 ESR2 FIGLA LFA1 RELA SNAI2 TCF3 TP63
4315150
chr16 11277130 rs74421077 A T
CTCF EBF1 ESR1 ESR2 RELA
4315151
chr16 11277188 rs572506071 A AC
CTCF EBF1 NFKB1 PLAG1 REL RELA
4315152
chr16 11277211 rs75084283 G A
CTCF EBF1 RELA ZNF263
4315153
chr16 11277230 rs183250781 C T
CTCF EBF1 RELA
4315154
chr16 11277297 rs961285 T A
CTCF EBF1 JUN NR2C2 RELA SREBF2
4315155
chr16 11277337 rs569288498 C T
EBF1 RELA TFAP2A TFAP2B TFAP2C
4315156
chr16 11277347 rs530671687 T C
EBF1 RELA
4315157
Genes possibly regulated by vista21838[chr16:11277053-11277355]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 11343476 11445619 + RMI2 ENSG00000175643.7 11343476 0.93 0.98 14540 33879
chr16 11348262 11350036 - SOCS1 ENSG00000185338.4 11350036 0.81 0.99 14541 27319
chr16 11361605 11363390 - TNP2 ENSG00000178279.3 11363390 1.0 0.0 14542 13965
chr16 11367144 11367452 - PRM3 ENSG00000178257.2 11367452 0.0 1.0 14543 9903
chr16 11369496 11370337 - PRM2 ENSG00000122304.6 11370337 0.66 0.97 14544 7018
chr16 11374693 11375207 - PRM1 ENSG00000175646.3 11375207 0.78 1.0 14545 2148
Expression level of Genes
Back to top
miRNAs possibly regulated by vista21838[chr16:11277053-11277355]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results