EnhancerDB
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  3. vista21842[chr16:11299930-11300255]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21842[chr16:11299930-11300255]
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Tissue distribution of vista21842
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Transcription factor that possibly regulate vista21842[chr16:11299930-11300255]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 11299927 11300171 RUNX3 UCSC Txn Factor no Conserved 108180632
chr16 11299953 11300171 POU2F2 UCSC Txn Factor no Conserved 108180636
chr16 11299947 11299959 PKNOX1 JASPAR yes 9494860
chr16 11299947 11299959 PKNOX2 JASPAR yes 9494861
chr16 11299947 11299959 TGIF1 JASPAR yes 9494862
chr16 11299947 11299959 TGIF2 JASPAR yes 9494863
chr16 11299947 11299959 PKNOX1 JASPAR yes 49340479
chr16 11299947 11299959 PKNOX2 JASPAR yes 49340480
chr16 11299947 11299959 TGIF1 JASPAR yes 49340481
chr16 11299947 11299959 TGIF2 JASPAR yes 49340482
chr16 11299948 11299958 MSC JASPAR yes 9494864
chr16 11299948 11299958 MSC JASPAR yes 49340483
chr16 11299953 11299957 NFE TRANSFAC yes 9494865
chr16 11299953 11299957 NFE TRANSFAC yes 49340484
chr16 11300024 11300039 JUND JASPAR yes 9494866
chr16 11300024 11300039 JUND JASPAR yes 49340485
chr16 11300025 11300038 JUN JASPAR yes 9494867
chr16 11300025 11300038 JUN JASPAR yes 49340486
chr16 11300026 11300039 ATF4 JASPAR yes 9494868
chr16 11300026 11300039 ATF4 JASPAR yes 49340487
chr16 11300027 11300038 CEBPA JASPAR yes 9494869
chr16 11300027 11300038 CEBPA JASPAR yes 49340488
chr16 11300045 11300056 FLI1 JASPAR yes 9494870
chr16 11300045 11300056 FLI1 JASPAR yes 49340489
chr16 11300046 11300056 ETS1 JASPAR yes 9494871
chr16 11300046 11300056 ETS1 JASPAR yes 49340490
chr16 11300046 11300057 ETV2 JASPAR yes 9494872
chr16 11300046 11300057 ETV2 JASPAR yes 49340491
chr16 11300049 11300068 RFX2 JASPAR yes 9494873
chr16 11300049 11300068 RFX2 JASPAR yes 49340492
chr16 11300051 11300066 RFX5 JASPAR yes 9494874
chr16 11300051 11300066 RFX5 JASPAR yes 49340493
chr16 11300053 11300068 RUNX2 JASPAR yes 9494875
chr16 11300053 11300068 RUNX2 JASPAR yes 49340494
chr16 11300053 11300069 RFX2 JASPAR yes 9494876
chr16 11300053 11300069 RFX3 JASPAR yes 9494877
chr16 11300053 11300069 RFX4 JASPAR yes 9494878
chr16 11300053 11300069 RFX5 JASPAR yes 9494879
chr16 11300053 11300069 RFX2 JASPAR yes 49340495
chr16 11300053 11300069 RFX3 JASPAR yes 49340496
chr16 11300053 11300069 RFX4 JASPAR yes 49340497
chr16 11300053 11300069 RFX5 JASPAR yes 49340498
chr16 11300057 11300072 RFX5 JASPAR yes 9494880
chr16 11300057 11300072 RFX5 JASPAR yes 49340499
chr16 11300063 11300075 POU2F1 JASPAR yes 9494881
chr16 11300063 11300075 POU2F1 JASPAR yes 49340500
chr16 11300063 11300077 POU1F1 JASPAR yes 9494882
chr16 11300063 11300077 POU1F1 JASPAR yes 49340501
chr16 11300064 11300076 POU3F1 JASPAR yes 9494883
chr16 11300064 11300076 POU3F2 JASPAR yes 9494884
chr16 11300064 11300076 POU3F1 JASPAR yes 49340502
chr16 11300064 11300076 POU3F2 JASPAR yes 49340503
chr16 11300064 11300077 POU2F2 JASPAR yes 9494885
chr16 11300064 11300077 POU2F2 JASPAR yes 49340504
chr16 11300065 11300073 POU2F1 TRANSFAC yes 9494886
chr16 11300065 11300073 POU2F1 TRANSFAC yes 49340505
chr16 11300065 11300074 POU3F4 JASPAR yes 9494887
chr16 11300065 11300074 POU5F1B JASPAR yes 9494888
chr16 11300065 11300074 POU3F4 JASPAR yes 49340506
chr16 11300065 11300074 POU5F1B JASPAR yes 49340507
chr16 11300066 11300073 POU2F1 TRANSFAC yes 9494889
chr16 11300066 11300073 POU2F2 TRANSFAC yes 9494890
chr16 11300066 11300073 POU2F1 TRANSFAC yes 49340508
chr16 11300066 11300073 POU2F2 TRANSFAC yes 49340509
chr16 11300070 11300084 E2F7 JASPAR yes 9494891
chr16 11300070 11300084 E2F7 JASPAR yes 49340510
chr16 11300090 11300101 EBF1 JASPAR yes 9494892
chr16 11300090 11300101 EBF1 JASPAR yes 49340511
chr16 11300103 11300118 STAT1 JASPAR yes 9494893
chr16 11300103 11300118 STAT1 JASPAR yes 49340512
chr16 11300105 11300116 STAT1 JASPAR yes 9494894
chr16 11300105 11300116 STAT3 JASPAR yes 9494895
chr16 11300105 11300116 STAT1 JASPAR yes 49340513
chr16 11300105 11300116 STAT3 JASPAR yes 49340514
chr16 11300116 11300122 YY1 JASPAR yes 9494896
chr16 11300116 11300122 YY1 JASPAR yes 49340515
chr16 11300119 11300133 ONECUT1 JASPAR yes 9494897
chr16 11300119 11300133 ONECUT1 JASPAR yes 49340516
chr16 11300154 11300171 ZNF410 JASPAR yes 9494898
chr16 11300154 11300171 ZNF410 JASPAR yes 49340517
chr16 11300163 11300169 MAZ TRANSFAC yes 9494899
chr16 11300163 11300169 MAZ TRANSFAC yes 49340518
chr16 11300167 11300171 LFA1 TRANSFAC yes 9494900
chr16 11300167 11300171 LFA1 TRANSFAC yes 49340519
chr16 11300170 11300175 MYC TRANSFAC yes 9494901
chr16 11300170 11300175 MYC TRANSFAC yes 49340520
chr16 11300202 11300223 REST JASPAR yes 9494902
chr16 11300202 11300223 REST JASPAR yes 49340521
chr16 11300203 11300222 REST JASPAR yes 9494903
chr16 11300203 11300222 REST JASPAR yes 49340522
chr16 11300228 11300243 STAT1 JASPAR yes 9494904
chr16 11300228 11300243 STAT1 JASPAR yes 49340523
chr16 11300230 11300241 STAT1 JASPAR yes 9494905
chr16 11300230 11300241 STAT3 JASPAR yes 9494906
chr16 11300230 11300241 STAT1 JASPAR yes 49340524
chr16 11300230 11300241 STAT3 JASPAR yes 49340525
SNP sites on vista21842[chr16:11299930-11300255]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 11299942 rs193771 G A
RUNX3
4315388
chr16 11299958 rs561015852 C G
MSC PKNOX1 PKNOX2 POU2F2 RUNX3 TGIF1 TGIF2
4315389
chr16 11299971 rs115920556 C G,T
POU2F2 RUNX3
4315390
chr16 11300095 rs78759143 C T
EBF1 POU2F2 RUNX3
4315391
chr16 11300101 rs571268183 G A
EBF1 POU2F2 RUNX3
4315392
chr16 11300112 rs537016440 G A
POU2F2 RUNX3 STAT1 STAT3
4315393
chr16 11300181 rs73507365 C T no 4315394
chr16 11300216 rs78621313 G A
REST
4315395
chr16 11300220 rs148572332 T C,G
REST
4315396
Genes possibly regulated by vista21842[chr16:11299930-11300255]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 11343476 11445619 + RMI2 ENSG00000175643.7 11343476 0.93 0.98 14540 56779
chr16 11348262 11350036 - SOCS1 ENSG00000185338.4 11350036 0.81 0.99 14541 50219
chr16 11361605 11363390 - TNP2 ENSG00000178279.3 11363390 1.0 0.0 14542 36865
chr16 11367144 11367452 - PRM3 ENSG00000178257.2 11367452 0.0 1.0 14543 32803
chr16 11369496 11370337 - PRM2 ENSG00000122304.6 11370337 0.66 0.97 14544 29918
chr16 11374693 11375207 - PRM1 ENSG00000175646.3 11375207 0.78 1.0 14545 25048
Expression level of Genes
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miRNAs possibly regulated by vista21842[chr16:11299930-11300255]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results