EnhancerDB
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  3. vista21843[chr16:11300663-11300859]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21843[chr16:11300663-11300859]
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Tissue distribution of vista21843
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Transcription factor that possibly regulate vista21843[chr16:11300663-11300859]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 11300627 11301031 RELA UCSC Txn Factor no Conserved 108180639
chr16 11300710 11300953 RUNX3 UCSC Txn Factor no Conserved 108180642
chr16 11300680 11300695 RFX5 JASPAR yes 9494959
chr16 11300680 11300695 RFX5 JASPAR yes 49340526
chr16 11300685 11300699 TLX1 JASPAR yes 9494960
chr16 11300685 11300699 TLX1 JASPAR yes 49340527
chr16 11300730 11300735 NFY TRANSFAC yes 9494961
chr16 11300730 11300735 NFY TRANSFAC yes 49340528
chr16 11300748 11300760 GLI2 JASPAR yes 9494962
chr16 11300748 11300760 GLI2 JASPAR yes 49340529
chr16 11300751 11300766 JUND JASPAR yes 9494963
chr16 11300751 11300766 JUND JASPAR yes 49340530
chr16 11300774 11300787 SMAD2 JASPAR yes 9494964
chr16 11300774 11300787 SMAD2 JASPAR yes 49340531
chr16 11300777 11300788 TBX20 JASPAR yes 9494965
chr16 11300777 11300788 TBX20 JASPAR yes 49340532
chr16 11300778 11300788 TBX21 JASPAR yes 9494966
chr16 11300778 11300788 TBX21 JASPAR yes 49340533
chr16 11300784 11300788 YY1 TRANSFAC yes 9494967
chr16 11300784 11300788 YY1 TRANSFAC yes 49340534
chr16 11300792 11300805 JUN JASPAR yes 9494968
chr16 11300792 11300805 JUN JASPAR yes 49340535
chr16 11300812 11300822 RELA JASPAR yes 9494969
chr16 11300812 11300822 RELA JASPAR yes 49340536
chr16 11300812 11300823 NFKB1 JASPAR yes 9494970
chr16 11300812 11300823 NFKB1 JASPAR yes 49340537
chr16 11300813 11300823 NFKB1 JASPAR yes 9494971
chr16 11300813 11300823 RELA JASPAR yes 9494972
chr16 11300813 11300823 REL JASPAR yes 9494973
chr16 11300813 11300823 NFKB1 JASPAR yes 49340538
chr16 11300813 11300823 RELA JASPAR yes 49340539
chr16 11300813 11300823 REL JASPAR yes 49340540
chr16 11300817 11300827 MZF1 JASPAR yes 9494974
chr16 11300817 11300827 MZF1 JASPAR yes 49340541
chr16 11300817 11300829 INSM1 JASPAR yes 9494975
chr16 11300817 11300829 INSM1 JASPAR yes 49340542
chr16 11300819 11300833 PLAG1 JASPAR yes 9494976
chr16 11300819 11300833 PLAG1 JASPAR yes 49340543
chr16 11300841 11300847 TCF4 TRANSFAC yes 9494977
chr16 11300841 11300847 TCF4 TRANSFAC yes 49340544
chr16 11300843 11300853 MSC JASPAR yes 9494978
chr16 11300843 11300853 MSC JASPAR yes 49340545
chr16 11300844 11300857 SCRT2 JASPAR yes 9494979
chr16 11300844 11300857 SCRT2 JASPAR yes 49340546
chr16 11300849 11300862 ATF4 JASPAR yes 9494980
chr16 11300849 11300862 ATF4 JASPAR yes 49340547
SNP sites on vista21843[chr16:11300663-11300859]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 11300792 rs144226981 C T
JUN RELA RUNX3
4315401
Genes possibly regulated by vista21843[chr16:11300663-11300859]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 11343476 11445619 + RMI2 ENSG00000175643.7 11343476 0.93 0.98 14540 57383
chr16 11348262 11350036 - SOCS1 ENSG00000185338.4 11350036 0.81 0.99 14541 50823
chr16 11361605 11363390 - TNP2 ENSG00000178279.3 11363390 1.0 0.0 14542 37469
chr16 11367144 11367452 - PRM3 ENSG00000178257.2 11367452 0.0 1.0 14543 33407
chr16 11369496 11370337 - PRM2 ENSG00000122304.6 11370337 0.66 0.97 14544 30522
chr16 11374693 11375207 - PRM1 ENSG00000175646.3 11375207 0.78 1.0 14545 25652
Expression level of Genes
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miRNAs possibly regulated by vista21843[chr16:11300663-11300859]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results