EnhancerDB
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  3. vista21852[chr16:11345704-11346020]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21852[chr16:11345704-11346020]
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Tissue distribution of vista21852
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Transcription factor that possibly regulate vista21852[chr16:11345704-11346020]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 11342955 11350800 POLR2A UCSC Txn Factor no Conserved 108180956
chr16 11345931 11346218 RUNX3 UCSC Txn Factor no Conserved 108181115
chr16 11345703 11345707 H4TF2 TRANSFAC yes 9500336
chr16 11345703 11345707 H4TF2 TRANSFAC yes 49340910
chr16 11345716 11345722 YY1 JASPAR yes 9500337
chr16 11345716 11345722 YY1 JASPAR yes 49340911
chr16 11345727 11345742 ESR2 JASPAR yes 9500338
chr16 11345727 11345742 ESR2 JASPAR yes 49340912
chr16 11345734 11345745 ESRRA JASPAR yes 9500339
chr16 11345734 11345745 ESRRB JASPAR yes 9500340
chr16 11345734 11345745 ESRRA JASPAR yes 49340913
chr16 11345734 11345745 ESRRB JASPAR yes 49340914
chr16 11345735 11345743 NR4A2 JASPAR yes 9500341
chr16 11345735 11345743 NR4A2 JASPAR yes 49340915
chr16 11345736 11345746 RORA JASPAR yes 9500342
chr16 11345736 11345746 RORA JASPAR yes 49340916
chr16 11345772 11345776 YY1 TRANSFAC yes 9500343
chr16 11345772 11345776 YY1 TRANSFAC yes 49340917
chr16 11345772 11345785 ELF1 JASPAR yes 9500344
chr16 11345772 11345785 ELF1 JASPAR yes 49340918
chr16 11345773 11345781 FEV JASPAR yes 9500345
chr16 11345773 11345781 FEV JASPAR yes 49340919
chr16 11345773 11345786 JUN JASPAR yes 9500346
chr16 11345773 11345786 JUN JASPAR yes 49340920
chr16 11345774 11345792 SRF JASPAR yes 9500347
chr16 11345774 11345792 SRF JASPAR yes 49340921
chr16 11345777 11345790 ZBTB18 JASPAR yes 9500348
chr16 11345777 11345790 ZBTB18 JASPAR yes 49340922
chr16 11345784 11345791 NFATC2 JASPAR yes 9500349
chr16 11345784 11345791 NFATC2 JASPAR yes 49340923
chr16 11345792 11345807 HNF4G JASPAR yes 9500350
chr16 11345792 11345807 HNF4G JASPAR yes 49340924
chr16 11345793 11345798 SP1 TRANSFAC yes 9500351
chr16 11345793 11345798 SP1 TRANSFAC yes 49340925
chr16 11345831 11345835 ESR1 TRANSFAC yes 9500352
chr16 11345831 11345835 ESR1 TRANSFAC yes 49340926
chr16 11345833 11345848 AR JASPAR yes 9500353
chr16 11345833 11345848 AR JASPAR yes 49340927
chr16 11345840 11345844 NFE TRANSFAC yes 9500354
chr16 11345840 11345844 NFE TRANSFAC yes 49340928
chr16 11345843 11345849 MZF1 JASPAR yes 9500355
chr16 11345843 11345849 MZF1 JASPAR yes 49340929
chr16 11345845 11345865 RREB1 JASPAR yes 9500356
chr16 11345845 11345865 RREB1 JASPAR yes 49340930
chr16 11345889 11345905 ZNF143 JASPAR yes 9500357
chr16 11345889 11345905 ZNF143 JASPAR yes 49340931
chr16 11345897 11345906 HIC2 JASPAR yes 9500358
chr16 11345897 11345906 HIC2 JASPAR yes 49340932
chr16 11345899 11345906 SP1 TRANSFAC yes 9500359
chr16 11345899 11345906 SP1 TRANSFAC yes 49340933
chr16 11345900 11345907 SP1 TRANSFAC yes 9500360
chr16 11345900 11345907 SP1 TRANSFAC yes 49340934
chr16 11345901 11345906 SP1 TRANSFAC yes 9500361
chr16 11345901 11345906 SP1 TRANSFAC yes 49340935
chr16 11345901 11345907 SP1 TRANSFAC yes 9500362
chr16 11345901 11345907 SP1 TRANSFAC yes 49340936
chr16 11345907 11345923 SOX4 JASPAR yes 9500363
chr16 11345907 11345923 SOX4 JASPAR yes 49340937
chr16 11345927 11345942 ZIC3 JASPAR yes 9500364
chr16 11345927 11345942 ZIC4 JASPAR yes 9500365
chr16 11345927 11345942 ZIC3 JASPAR yes 49340938
chr16 11345927 11345942 ZIC4 JASPAR yes 49340939
chr16 11345928 11345942 ZIC1 JASPAR yes 9500366
chr16 11345928 11345942 ZIC1 JASPAR yes 49340940
chr16 11345933 11345938 TFAP2A TRANSFAC yes 9500367
chr16 11345933 11345938 TFAP2A TRANSFAC yes 49340941
chr16 11345933 11345939 MZF1 JASPAR yes 9500368
chr16 11345933 11345939 MZF1 JASPAR yes 49340942
chr16 11345951 11345961 ID4 JASPAR yes 9500369
chr16 11345951 11345961 TCF3 JASPAR yes 9500370
chr16 11345951 11345961 TCF4 JASPAR yes 9500371
chr16 11345951 11345961 ID4 JASPAR yes 49340943
chr16 11345951 11345961 TCF3 JASPAR yes 49340944
chr16 11345951 11345961 TCF4 JASPAR yes 49340945
chr16 11345953 11345958 USF2 TRANSFAC yes 9500372
chr16 11345953 11345958 USF2 TRANSFAC yes 49340946
chr16 11345989 11346007 IRF2 JASPAR yes 9500373
chr16 11345989 11346007 IRF2 JASPAR yes 49340947
chr16 11345990 11346011 IRF1 JASPAR yes 9500374
chr16 11345990 11346011 ZNF263 JASPAR yes 9500375
chr16 11345990 11346011 IRF1 JASPAR yes 49340948
chr16 11345990 11346011 ZNF263 JASPAR yes 49340949
chr16 11345992 11346007 PRDM1 JASPAR yes 9500376
chr16 11345992 11346007 PRDM1 JASPAR yes 49340950
chr16 11345998 11346013 STAT2 JASPAR yes 9500377
chr16 11345998 11346013 STAT2 JASPAR yes 49340951
chr16 11346009 11346020 HOXC13 JASPAR yes 9500378
chr16 11346009 11346020 HOXC13 JASPAR yes 49340952
chr16 11346016 11346030 BATF3 JASPAR yes 9500379
chr16 11346016 11346030 BATF3 JASPAR yes 49340953
chr16 11346017 11346029 JDP2 JASPAR yes 9500380
chr16 11346017 11346029 JDP2 JASPAR yes 49340954
chr16 11346019 11346024 ATF1 TRANSFAC yes 9500381
chr16 11346019 11346024 ATF1 TRANSFAC yes 49340955
chr16 11346019 11346027 CREB1 JASPAR yes 9500382
chr16 11346019 11346027 CREB1 JASPAR yes 49340956
SNP sites on vista21852[chr16:11345704-11346020]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 11345728 rs57061256 C G,T
ESR2 POLR2A
4316109
chr16 11345752 rs60607857 G A
POLR2A
4316110
chr16 11345754 rs149311 C T
POLR2A
4316111
chr16 11345817 rs61418899 G T
POLR2A
4316112
chr16 11345898 rs140554969 G C
HIC2 POLR2A ZNF143
4316113
chr16 11346008 rs12929112 A C
IRF1 POLR2A RUNX3 STAT2 ZNF263
4316114
Genes possibly regulated by vista21852[chr16:11345704-11346020]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 11343476 11445619 + RMI2 ENSG00000175643.7 11343476 0.93 0.98 14540 97772
chr16 11348262 11350036 - SOCS1 ENSG00000185338.4 11350036 0.81 0.99 14541 95984
chr16 11361605 11363390 - TNP2 ENSG00000178279.3 11363390 1.0 0.0 14542 82630
chr16 11367144 11367452 - PRM3 ENSG00000178257.2 11367452 0.0 1.0 14543 78568
chr16 11369496 11370337 - PRM2 ENSG00000122304.6 11370337 0.66 0.97 14544 75683
chr16 11374693 11375207 - PRM1 ENSG00000175646.3 11375207 0.78 1.0 14545 70813
Expression level of Genes
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miRNAs possibly regulated by vista21852[chr16:11345704-11346020]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results