EnhancerDB
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  3. vista21857[chr16:11402836-11403053]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21857[chr16:11402836-11403053]
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Tissue distribution of vista21857
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Transcription factor that possibly regulate vista21857[chr16:11402836-11403053]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 11402633 11403009 TCF12 UCSC Txn Factor no Conserved 108181257
chr16 11402643 11403021 TCF3 UCSC Txn Factor no Conserved 108181259
chr16 11402704 11403038 RUNX3 UCSC Txn Factor no Conserved 108181268
chr16 11402709 11403025 EBF1 UCSC Txn Factor no Conserved 108181270
chr16 11402747 11403038 PAX5 UCSC Txn Factor no Conserved 108181277
chr16 11402772 11403016 ESR1 UCSC Txn Factor no Conserved 108181284
chr16 11402835 11402855 RREB1 JASPAR yes 9504438
chr16 11402835 11402855 RREB1 JASPAR yes 49341075
chr16 11402836 11402846 NHLH1 JASPAR yes 9504439
chr16 11402836 11402846 NHLH1 JASPAR yes 49341076
chr16 11402836 11402851 RUNX2 JASPAR yes 9504440
chr16 11402836 11402851 RUNX2 JASPAR yes 49341077
chr16 11402840 11402850 RUNX3 JASPAR yes 9504441
chr16 11402840 11402850 RUNX3 JASPAR yes 49341078
chr16 11402841 11402850 RUNX2 JASPAR yes 9504442
chr16 11402841 11402850 RUNX2 JASPAR yes 49341079
chr16 11402865 11402884 CTCF JASPAR yes 9504443
chr16 11402865 11402884 CTCF JASPAR yes 49341080
chr16 11402866 11402881 ZIC3 JASPAR yes 9504444
chr16 11402866 11402881 ZIC4 JASPAR yes 9504445
chr16 11402866 11402881 ZIC3 JASPAR yes 49341081
chr16 11402866 11402881 ZIC4 JASPAR yes 49341082
chr16 11402867 11402881 ZIC1 JASPAR yes 9504446
chr16 11402867 11402881 ZIC1 JASPAR yes 49341083
chr16 11402874 11402884 SP1 JASPAR yes 9504447
chr16 11402874 11402884 SP1 JASPAR yes 49341084
chr16 11402876 11402880 LFA1 TRANSFAC yes 9504448
chr16 11402876 11402880 LFA1 TRANSFAC yes 49341085
chr16 11402891 11402910 PAX5 JASPAR yes 9504449
chr16 11402891 11402910 PAX5 JASPAR yes 49341086
chr16 11402894 11402911 PAX1 JASPAR yes 9504450
chr16 11402894 11402911 PAX1 JASPAR yes 49341087
chr16 11402908 11402913 SP1 TRANSFAC yes 9504451
chr16 11402908 11402913 SP1 TRANSFAC yes 49341088
chr16 11402933 11402937 LFA1 TRANSFAC yes 9504452
chr16 11402933 11402937 LFA1 TRANSFAC yes 49341089
chr16 11402936 11402941 MYC TRANSFAC yes 9504453
chr16 11402936 11402941 MYC TRANSFAC yes 49341090
chr16 11402946 11402957 SPDEF JASPAR yes 9504454
chr16 11402946 11402957 SPDEF JASPAR yes 49341091
chr16 11402948 11402959 STAT3 JASPAR yes 9504455
chr16 11402948 11402959 STAT3 JASPAR yes 49341092
chr16 11402953 11402958 ETS2 TRANSFAC yes 9504456
chr16 11402953 11402958 ETS2 TRANSFAC yes 49341093
chr16 11402953 11402964 NFKB1 JASPAR yes 9504457
chr16 11402953 11402964 NFKB1 JASPAR yes 49341094
chr16 11402971 11402974 MYB TRANSFAC yes 9504458
chr16 11402971 11402974 MYB TRANSFAC yes 49341095
chr16 11402980 11402990 SP1 JASPAR yes 9504459
chr16 11402980 11402990 SP1 JASPAR yes 49341096
chr16 11402981 11402989 SP1 TRANSFAC yes 9504460
chr16 11402981 11402989 SP1 TRANSFAC yes 49341097
chr16 11402981 11402990 SP1 TRANSFAC yes 9504461
chr16 11402981 11402990 SP1 TRANSFAC yes 49341098
chr16 11402982 11402987 SP1 TRANSFAC yes 9504462
chr16 11402982 11402987 SP1 TRANSFAC yes 49341099
chr16 11402983 11402988 SP1 TRANSFAC yes 9504463
chr16 11402983 11402988 SP1 TRANSFAC yes 49341100
chr16 11402983 11402989 SP1 TRANSFAC yes 9504464
chr16 11402983 11402989 SP1 TRANSFAC yes 49341101
chr16 11402992 11403002 NKX2-3 JASPAR yes 9504465
chr16 11402992 11403002 NKX2-3 JASPAR yes 49341102
chr16 11403000 11403006 MZF1 JASPAR yes 9504466
chr16 11403000 11403006 MZF1 JASPAR yes 49341103
chr16 11403000 11403021 ZNF263 JASPAR yes 9504467
chr16 11403000 11403021 ZNF263 JASPAR yes 49341104
chr16 11403015 11403026 EBF1 JASPAR yes 9504468
chr16 11403015 11403026 EBF1 JASPAR yes 49341105
chr16 11403030 11403050 TP53 JASPAR yes 9504469
chr16 11403030 11403050 TP53 JASPAR yes 49341106
chr16 11403031 11403043 INSM1 JASPAR yes 9504470
chr16 11403031 11403043 INSM1 JASPAR yes 49341107
SNP sites on vista21857[chr16:11402836-11403053]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 11402908 rs35307035 G A
EBF1 ESR1 PAX1 PAX5 RUNX3 SP1 TCF12 TCF3
4316769
chr16 11402928 rs139169499 C T
EBF1 ESR1 PAX5 RUNX3 TCF12 TCF3
4316770
chr16 11402964 rs371986829 C G,T
EBF1 ESR1 NFKB1 PAX5 RUNX3 TCF12 TCF3
4316771
chr16 11402967 rs143093728 C T
EBF1 ESR1 PAX5 RUNX3 TCF12 TCF3
4316772
chr16 11403013 rs12162021 G A,T
EBF1 ESR1 PAX5 RUNX3 TCF3 ZNF263
4316773
Genes possibly regulated by vista21857[chr16:11402836-11403053]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 11343476 11445619 + RMI2 ENSG00000175643.7 11343476 0.93 0.98 14540 40640
chr16 11348262 11350036 - SOCS1 ENSG00000185338.4 11350036 0.81 0.99 14541 47200
chr16 11361605 11363390 - TNP2 ENSG00000178279.3 11363390 1.0 0.0 14542 60554
chr16 11367144 11367452 - PRM3 ENSG00000178257.2 11367452 0.0 1.0 14543 64616
chr16 11369496 11370337 - PRM2 ENSG00000122304.6 11370337 0.66 0.97 14544 67501
chr16 11374693 11375207 - PRM1 ENSG00000175646.3 11375207 0.78 1.0 14545 72371
Expression level of Genes
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miRNAs possibly regulated by vista21857[chr16:11402836-11403053]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results