EnhancerDB
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  3. vista21876[chr16:11656662-11657039]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21876[chr16:11656662-11657039]
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Tissue distribution of vista21876
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Transcription factor that possibly regulate vista21876[chr16:11656662-11657039]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 11656704 11656714 SREBF1 JASPAR yes 9520419
chr16 11656704 11656714 SREBF2 JASPAR yes 9520420
chr16 11656704 11656714 SREBF1 JASPAR yes 49341979
chr16 11656704 11656714 SREBF2 JASPAR yes 49341980
chr16 11656725 11656744 PAX5 JASPAR yes 9520421
chr16 11656725 11656744 PAX5 JASPAR yes 49341981
chr16 11656729 11656740 NFE2L2 JASPAR yes 9520422
chr16 11656729 11656740 NFE2L2 JASPAR yes 49341982
chr16 11656751 11656763 IRF1 JASPAR yes 9520423
chr16 11656751 11656763 IRF1 JASPAR yes 49341983
chr16 11656752 11656773 IRF1 JASPAR yes 9520424
chr16 11656752 11656773 IRF1 JASPAR yes 49341984
chr16 11656756 11656771 FOXP1 JASPAR yes 9520425
chr16 11656756 11656771 FOXP1 JASPAR yes 49341985
chr16 11656756 11656777 IRF1 JASPAR yes 9520426
chr16 11656756 11656777 IRF1 JASPAR yes 49341986
chr16 11656757 11656772 FOXP1 JASPAR yes 9520427
chr16 11656757 11656772 FOXP1 JASPAR yes 49341987
chr16 11656785 11656800 FOXP1 JASPAR yes 9520428
chr16 11656785 11656800 FOXP1 JASPAR yes 49341988
chr16 11656789 11656793 TEAD2 TRANSFAC yes 9520429
chr16 11656789 11656793 TEAD2 TRANSFAC yes 49341989
chr16 11656789 11656794 TBP TRANSFAC yes 9520430
chr16 11656789 11656794 TBP TRANSFAC yes 49341990
chr16 11656815 11656825 ALX3 JASPAR yes 9520431
chr16 11656815 11656825 GSX2 JASPAR yes 9520432
chr16 11656815 11656825 MIXL1 JASPAR yes 9520433
chr16 11656815 11656825 MNX1 JASPAR yes 9520434
chr16 11656815 11656825 ALX3 JASPAR yes 49341991
chr16 11656815 11656825 GSX2 JASPAR yes 49341992
chr16 11656815 11656825 MIXL1 JASPAR yes 49341993
chr16 11656815 11656825 MNX1 JASPAR yes 49341994
chr16 11656816 11656824 ISX JASPAR yes 9520435
chr16 11656816 11656824 LMX1A JASPAR yes 9520436
chr16 11656816 11656824 LMX1B JASPAR yes 9520437
chr16 11656816 11656824 NKX6-1 JASPAR yes 9520438
chr16 11656816 11656824 NKX6-2 JASPAR yes 9520439
chr16 11656816 11656824 PRRX1 JASPAR yes 9520440
chr16 11656816 11656824 RAX2 JASPAR yes 9520441
chr16 11656816 11656824 SHOX JASPAR yes 9520442
chr16 11656816 11656824 UNCX JASPAR yes 9520443
chr16 11656816 11656824 VAX1 JASPAR yes 9520444
chr16 11656816 11656824 ISX JASPAR yes 49341995
chr16 11656816 11656824 LMX1A JASPAR yes 49341996
chr16 11656816 11656824 LMX1B JASPAR yes 49341997
chr16 11656816 11656824 NKX6-1 JASPAR yes 49341998
chr16 11656816 11656824 NKX6-2 JASPAR yes 49341999
chr16 11656816 11656824 PRRX1 JASPAR yes 49342000
chr16 11656816 11656824 RAX2 JASPAR yes 49342001
chr16 11656816 11656824 SHOX JASPAR yes 49342002
chr16 11656816 11656824 UNCX JASPAR yes 49342003
chr16 11656816 11656824 VAX1 JASPAR yes 49342004
chr16 11656821 11656827 TBP TRANSFAC yes 9520445
chr16 11656821 11656827 TBP TRANSFAC yes 49342005
chr16 11656875 11656880 ETS2 TRANSFAC yes 9520446
chr16 11656875 11656880 ETS2 TRANSFAC yes 49342006
chr16 11656917 11656934 ESR1 JASPAR yes 9520447
chr16 11656917 11656934 ESR1 JASPAR yes 49342007
chr16 11656917 11656935 ESR2 JASPAR yes 9520448
chr16 11656917 11656935 ESR2 JASPAR yes 49342008
chr16 11656918 11656938 ESR1 JASPAR yes 9520449
chr16 11656918 11656938 ESR1 JASPAR yes 49342009
chr16 11656922 11656938 SOX8 JASPAR yes 9520450
chr16 11656922 11656938 SOX8 JASPAR yes 49342010
chr16 11656933 11656946 EOMES JASPAR yes 9520451
chr16 11656933 11656946 EOMES JASPAR yes 49342011
chr16 11656936 11656946 SREBF1 JASPAR yes 9520452
chr16 11656936 11656946 SREBF2 JASPAR yes 9520453
chr16 11656936 11656946 SREBF1 JASPAR yes 49342012
chr16 11656936 11656946 SREBF2 JASPAR yes 49342013
chr16 11656937 11656945 MGA JASPAR yes 9520454
chr16 11656937 11656945 MGA JASPAR yes 49342014
chr16 11656965 11656980 JUND JASPAR yes 9520455
chr16 11656965 11656980 JUND JASPAR yes 49342015
chr16 11656993 11657006 POU3F3 JASPAR yes 9520456
chr16 11656993 11657006 POU3F3 JASPAR yes 49342016
chr16 11656997 11657001 TEAD2 TRANSFAC yes 9520457
chr16 11656997 11657001 TEAD2 TRANSFAC yes 49342017
chr16 11656997 11657009 MEF2A JASPAR yes 9520458
chr16 11656997 11657009 MEF2A JASPAR yes 49342018
chr16 11657017 11657028 BATF JASPAR yes 9520459
chr16 11657017 11657028 BATF JASPAR yes 49342019
chr16 11657021 11657028 JUN TRANSFAC yes 9520460
chr16 11657021 11657028 JUN TRANSFAC yes 49342020
chr16 11657030 11657049 PAX5 JASPAR yes 9520461
chr16 11657030 11657049 PAX5 JASPAR yes 49342021
chr16 11657038 11657042 NFE TRANSFAC yes 9520462
chr16 11657038 11657042 NFE TRANSFAC yes 49342022
SNP sites on vista21876[chr16:11656662-11657039]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 11656703 rs539979917 G C no 4319383
chr16 11656819 rs57356724 A C,G
ALX3 GSX2 ISX LMX1A LMX1B MIXL1 MNX1 NKX6-1 NKX6-2 PRRX1 RAX2 SHOX UNCX VAX1
4319384
chr16 11657011 rs35555016 AT A no 4319385
chr16 11657011 rs796969412 AT A no 4319386
Genes possibly regulated by vista21876[chr16:11656662-11657039]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 11453702 11617444 - CTD-3088G3.8 ENSG00000188897.4 11617444 0.92 1.0 14546 60782
chr16 11641853 11730237 - LITAF ENSG00000189067.8 11730237 0.69 0.99 14547 26802
Expression level of Genes
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miRNAs possibly regulated by vista21876[chr16:11656662-11657039]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results