EnhancerDB
  1. Home
  2. Enhancers
  3. vista21880[chr16:11677764-11678427]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21880[chr16:11677764-11678427]
Back to top
Tissue distribution of vista21880
Back to top
Transcription factor that possibly regulate vista21880[chr16:11677764-11678427]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 11677845 11678151 FOXA1 UCSC Txn Factor no Conserved 108181986
chr16 11678023 11678252 SPI1 UCSC Txn Factor no Conserved 108182007
chr16 11677767 11677778 CEBPB JASPAR yes 9522347
chr16 11677767 11677778 CEBPB JASPAR yes 49342253
chr16 11677767 11677779 DBP JASPAR yes 9522348
chr16 11677767 11677779 HLF JASPAR yes 9522349
chr16 11677767 11677779 TEF JASPAR yes 9522350
chr16 11677767 11677779 DBP JASPAR yes 49342254
chr16 11677767 11677779 HLF JASPAR yes 49342255
chr16 11677767 11677779 TEF JASPAR yes 49342256
chr16 11677768 11677778 CEBPB JASPAR yes 9522351
chr16 11677768 11677778 CEBPD JASPAR yes 9522352
chr16 11677768 11677778 CEBPE JASPAR yes 9522353
chr16 11677768 11677778 CEBPG JASPAR yes 9522354
chr16 11677768 11677778 CEBPB JASPAR yes 49342257
chr16 11677768 11677778 CEBPD JASPAR yes 49342258
chr16 11677768 11677778 CEBPE JASPAR yes 49342259
chr16 11677768 11677778 CEBPG JASPAR yes 49342260
chr16 11677768 11677779 CEBPA JASPAR yes 9522355
chr16 11677768 11677779 CEBPA JASPAR yes 49342261
chr16 11677791 11677794 MYB TRANSFAC yes 9522356
chr16 11677791 11677794 MYB TRANSFAC yes 49342262
chr16 11677815 11677819 YY1 TRANSFAC yes 9522357
chr16 11677815 11677819 YY1 TRANSFAC yes 49342263
chr16 11677823 11677829 SOX10 JASPAR yes 9522358
chr16 11677823 11677829 SOX10 JASPAR yes 49342264
chr16 11677824 11677834 MSC JASPAR yes 9522359
chr16 11677824 11677834 MSC JASPAR yes 49342265
chr16 11677833 11677845 PKNOX2 JASPAR yes 9522360
chr16 11677833 11677845 PKNOX2 JASPAR yes 49342266
chr16 11677834 11677841 USF2 TRANSFAC yes 9522361
chr16 11677834 11677841 USF2 TRANSFAC yes 49342267
chr16 11677836 11677841 USF2 TRANSFAC yes 49342268
chr16 11677850 11677862 PBX1 JASPAR yes 49342269
chr16 11677851 11677865 ONECUT1 JASPAR yes 49342270
chr16 11677851 11677865 ONECUT2 JASPAR yes 49342271
chr16 11677851 11677865 ONECUT3 JASPAR yes 49342272
chr16 11677854 11677864 CUX1 JASPAR yes 49342273
chr16 11677878 11677889 DUX4 JASPAR yes 49342274
chr16 11677888 11677909 REST JASPAR yes 49342275
chr16 11677896 11677906 NFATC3 JASPAR yes 49342276
chr16 11677898 11677905 NFATC2 JASPAR yes 49342277
chr16 11677905 11677919 RXRB JASPAR yes 49342278
chr16 11677905 11677919 RXRG JASPAR yes 49342279
chr16 11677906 11677916 NKX2-3 JASPAR yes 49342280
chr16 11677907 11677916 NKX2-8 JASPAR yes 49342281
chr16 11677908 11677921 NR2F1 JASPAR yes 49342282
chr16 11677912 11677920 CREB1 JASPAR yes 49342283
chr16 11677912 11677922 RORA JASPAR yes 49342284
chr16 11677920 11677929 SRY JASPAR yes 49342285
chr16 11677922 11677925 MYB TRANSFAC yes 49342286
chr16 11677934 11677948 FOXF2 JASPAR yes 49342287
chr16 11677935 11677946 FOXA1 JASPAR yes 49342288
chr16 11677936 11677947 FOXB1 JASPAR yes 49342289
chr16 11677936 11677947 FOXC1 JASPAR yes 49342290
chr16 11677936 11677948 FOXC2 JASPAR yes 49342291
chr16 11677937 11677948 FOXP2 JASPAR yes 49342292
chr16 11677939 11677946 FOXD2 JASPAR yes 49342293
chr16 11677939 11677946 FOXI1 JASPAR yes 49342294
chr16 11677939 11677946 FOXL1 JASPAR yes 49342295
chr16 11677939 11677946 FOXO4 JASPAR yes 49342296
chr16 11677939 11677946 FOXO6 JASPAR yes 49342297
chr16 11677939 11677946 FOXP3 JASPAR yes 49342298
chr16 11677939 11677947 FOXD1 JASPAR yes 49342299
chr16 11677939 11677947 FOXG1 JASPAR yes 49342300
chr16 11677939 11677947 FOXO3 JASPAR yes 49342301
chr16 11677943 11677955 PBX1 JASPAR yes 49342302
chr16 11677963 11677978 ZIC4 JASPAR yes 49342303
chr16 11677991 11677999 CREB1 JASPAR yes 49342304
chr16 11677993 11677998 ATF1 TRANSFAC yes 49342305
chr16 11678017 11678023 HiNF-A TRANSFAC yes 49342306
chr16 11678029 11678034 ETS2 TRANSFAC yes 49342307
chr16 11678029 11678037 FEV JASPAR yes 49342308
chr16 11678030 11678037 SPI1 JASPAR yes 49342309
chr16 11678038 11678042 YY1 TRANSFAC yes 49342310
chr16 11678066 11678084 ESR1 JASPAR yes 49342311
chr16 11678071 11678075 YY1 TRANSFAC yes 49342312
chr16 11678081 11678102 IRF1 JASPAR yes 49342313
chr16 11678084 11678098 IRF7 JASPAR yes 49342314
chr16 11678084 11678098 IRF8 JASPAR yes 49342315
chr16 11678085 11678103 IRF2 JASPAR yes 49342316
chr16 11678086 11678098 IRF1 JASPAR yes 49342317
chr16 11678087 11678102 FOXP1 JASPAR yes 49342318
chr16 11678092 11678101 SRY JASPAR yes 49342319
chr16 11678109 11678124 ESR2 JASPAR yes 49342320
chr16 11678116 11678125 NFIX JASPAR yes 49342321
chr16 11678116 11678126 NFIA JASPAR yes 49342322
chr16 11678118 11678124 NFIC JASPAR yes 49342323
chr16 11678132 11678143 ELF5 JASPAR yes 49342324
chr16 11678132 11678145 ELF1 JASPAR yes 49342325
chr16 11678132 11678146 SPI1 JASPAR yes 49342326
chr16 11678132 11678146 SPIC JASPAR yes 49342327
chr16 11678133 11678140 SPI1 JASPAR yes 49342328
chr16 11678133 11678141 EHF JASPAR yes 49342329
chr16 11678135 11678142 SPIB JASPAR yes 49342330
chr16 11678144 11678158 SPI1 JASPAR yes 49342331
chr16 11678154 11678164 NFATC3 JASPAR yes 49342332
chr16 11678155 11678162 NFATC2 JASPAR yes 49342333
chr16 11678173 11678184 EBF1 JASPAR yes 49342334
chr16 11678177 11678182 TFAP2A TRANSFAC yes 49342335
chr16 11678177 11678183 MZF1 JASPAR yes 49342336
chr16 11678179 11678189 NFKB1 JASPAR yes 49342337
chr16 11678179 11678189 RELA JASPAR yes 49342338
chr16 11678179 11678189 REL JASPAR yes 49342339
chr16 11678179 11678190 NFKB1 JASPAR yes 49342340
chr16 11678267 11678277 MZF1 JASPAR yes 49342341
chr16 11678271 11678285 BATF3 JASPAR yes 49342342
chr16 11678273 11678291 MAFF JASPAR yes 49342343
chr16 11678274 11678289 MAFK JASPAR yes 49342344
chr16 11678278 11678289 NRL JASPAR yes 49342345
chr16 11678283 11678299 SOX8 JASPAR yes 49342346
chr16 11678292 11678307 FOXP1 JASPAR yes 49342347
chr16 11678293 11678304 FOXP2 JASPAR yes 49342348
chr16 11678293 11678305 FOXC2 JASPAR yes 49342349
chr16 11678295 11678306 FOXA1 JASPAR yes 49342350
chr16 11678299 11678303 YY1 TRANSFAC yes 49342351
chr16 11678302 11678313 STAT3 JASPAR yes 49342352
chr16 11678314 11678317 MYB TRANSFAC yes 49342353
chr16 11678333 11678348 HSF1 JASPAR yes 49342354
chr16 11678334 11678347 HSF4 JASPAR yes 49342355
chr16 11678340 11678351 FLI1 JASPAR yes 49342356
chr16 11678342 11678350 EHF JASPAR yes 49342357
chr16 11678344 11678351 SPIB JASPAR yes 49342358
chr16 11678352 11678363 FOXH1 JASPAR yes 49342359
chr16 11678353 11678359 ZNF354C JASPAR yes 49342360
chr16 11678354 11678364 RELA JASPAR yes 49342361
chr16 11678354 11678364 REL JASPAR yes 49342362
chr16 11678354 11678365 NFKB1 JASPAR yes 49342363
chr16 11678357 11678367 NFATC3 JASPAR yes 49342364
chr16 11678358 11678365 NFATC2 JASPAR yes 49342365
chr16 11678363 11678367 YY1 TRANSFAC yes 49342366
chr16 11678369 11678373 NFE TRANSFAC yes 49342367
chr16 11678378 11678388 FIGLA JASPAR yes 49342368
chr16 11678378 11678388 TCF3 JASPAR yes 49342369
chr16 11678380 11678385 USF2 TRANSFAC yes 49342370
chr16 11678385 11678405 TP63 JASPAR yes 49342371
SNP sites on vista21880[chr16:11677764-11678427]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 11677847 rs78253827 C A
FOXA1
4319738
chr16 11677857 rs12444633 A C
CUX1 FOXA1 ONECUT1 ONECUT2 ONECUT3 PBX1
4319739
chr16 11677955 rs12444653 A C
FOXA1 PBX1
4319740
chr16 11677999 rs372572169 A G
CREB1 FOXA1
4319741
chr16 11678025 rs555490928 G A
FOXA1 SPI1
4319742
chr16 11678026 rs572375560 A T
FOXA1 SPI1
4319743
chr16 11678150 rs3048042 CCT C
FOXA1 SPI1
4319744
chr16 11678150 rs571181859 CCT C
FOXA1 SPI1
4319745
chr16 11678178 rs562330780 T C
EBF1 MZF1 SPI1 TFAP2A
4319746
chr16 11678289 rs2868424 T A
MAFF MAFK NRL SOX8
4319747
chr16 11678332 rs8048558 G A no 4319748
chr16 11678403 rs8054918 T A,C,G
TP63
4319749
Genes possibly regulated by vista21880[chr16:11677764-11678427]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 11453702 11617444 - CTD-3088G3.8 ENSG00000188897.4 11617444 0.92 1.0 14546 39680
chr16 11641853 11730237 - LITAF ENSG00000189067.8 11730237 0.69 0.99 14547 48190
chr16 11762270 11773015 + SNN ENSG00000184602.5 11762270 0.7 1.0 14548 16157
Expression level of Genes
Back to top
miRNAs possibly regulated by vista21880[chr16:11677764-11678427]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results