EnhancerDB
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  3. vista21918[chr16:12541943-12542343]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21918[chr16:12541943-12542343]
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Tissue distribution of vista21918
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Transcription factor that possibly regulate vista21918[chr16:12541943-12542343]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 12541935 12541948 TFAP2A JASPAR yes 9581666
chr16 12541935 12541948 TFAP2A JASPAR yes 49344339
chr16 12541936 12541955 RFX2 JASPAR yes 9581667
chr16 12541936 12541955 RFX2 JASPAR yes 49344340
chr16 12541943 12541947 LFA1 TRANSFAC yes 9581668
chr16 12541943 12541947 LFA1 TRANSFAC yes 49344341
chr16 12541952 12541968 SOX4 JASPAR yes 9581669
chr16 12541952 12541968 SOX4 JASPAR yes 49344342
chr16 12541955 12541969 ATF7 JASPAR yes 9581670
chr16 12541955 12541969 BATF3 JASPAR yes 9581671
chr16 12541955 12541969 ATF7 JASPAR yes 49344343
chr16 12541955 12541969 BATF3 JASPAR yes 49344344
chr16 12541955 12541973 RARA JASPAR yes 9581672
chr16 12541955 12541973 RARA JASPAR yes 49344345
chr16 12541956 12541968 JDP2 JASPAR yes 9581673
chr16 12541956 12541968 JDP2 JASPAR yes 49344346
chr16 12541958 12541963 ATF1 TRANSFAC yes 9581674
chr16 12541958 12541963 ATF1 TRANSFAC yes 49344347
chr16 12541971 12541977 MZF1 JASPAR yes 9581675
chr16 12541971 12541977 MZF1 JASPAR yes 49344348
chr16 12541971 12541987 SRF JASPAR yes 9581676
chr16 12541971 12541987 SRF JASPAR yes 49344349
chr16 12541971 12541989 SRF JASPAR yes 9581677
chr16 12541971 12541989 SRF JASPAR yes 49344350
chr16 12541974 12541986 SRF JASPAR yes 9581678
chr16 12541974 12541986 SRF JASPAR yes 49344351
chr16 12541975 12541979 YY1 TRANSFAC yes 9581679
chr16 12541975 12541979 YY1 TRANSFAC yes 49344352
chr16 12541990 12541995 MYB TRANSFAC yes 9581680
chr16 12541990 12541995 MYB TRANSFAC yes 49344353
chr16 12542020 12542031 ESRRA JASPAR yes 9581681
chr16 12542020 12542031 ESRRA JASPAR yes 49344354
chr16 12542058 12542069 SPDEF JASPAR yes 9581682
chr16 12542058 12542069 SPDEF JASPAR yes 49344355
chr16 12542064 12542082 ESR1 JASPAR yes 9581683
chr16 12542064 12542082 ESR1 JASPAR yes 49344356
chr16 12542069 12542073 NFE TRANSFAC yes 9581684
chr16 12542069 12542073 NFE TRANSFAC yes 49344357
chr16 12542074 12542088 TCF7L2 JASPAR yes 9581685
chr16 12542074 12542088 TCF7L2 JASPAR yes 49344358
chr16 12542078 12542084 TCF1 TRANSFAC yes 9581686
chr16 12542078 12542084 TCF1 TRANSFAC yes 49344359
chr16 12542078 12542085 TCF4 TRANSFAC yes 9581687
chr16 12542078 12542085 TCF4 TRANSFAC yes 49344360
chr16 12542088 12542098 RELA JASPAR yes 9581688
chr16 12542088 12542098 RELA JASPAR yes 49344361
chr16 12542104 12542121 RARA JASPAR yes 9581689
chr16 12542104 12542121 RARA JASPAR yes 49344362
chr16 12542115 12542132 RXRA JASPAR yes 9581690
chr16 12542115 12542132 RXRA JASPAR yes 49344363
chr16 12542137 12542152 STAT1 JASPAR yes 9581691
chr16 12542137 12542152 STAT1 JASPAR yes 49344364
chr16 12542139 12542150 STAT1 JASPAR yes 9581692
chr16 12542139 12542150 STAT1 JASPAR yes 49344365
chr16 12542139 12542160 ZNF263 JASPAR yes 9581693
chr16 12542139 12542160 ZNF263 JASPAR yes 49344366
chr16 12542140 12542156 ZNF143 JASPAR yes 9581694
chr16 12542140 12542156 ZNF143 JASPAR yes 49344367
chr16 12542150 12542160 SP1 JASPAR yes 9581695
chr16 12542150 12542160 SP1 JASPAR yes 49344368
chr16 12542152 12542160 EHF JASPAR yes 9581696
chr16 12542152 12542160 EHF JASPAR yes 49344369
chr16 12542166 12542170 NFE TRANSFAC yes 9581697
chr16 12542166 12542170 NFE TRANSFAC yes 49344370
chr16 12542174 12542178 ESR1 TRANSFAC yes 9581698
chr16 12542174 12542178 ESR1 TRANSFAC yes 49344371
chr16 12542192 12542205 SMAD2 JASPAR yes 9581699
chr16 12542192 12542205 SMAD2 JASPAR yes 49344372
chr16 12542202 12542214 NHLH1 JASPAR yes 9581700
chr16 12542202 12542214 NHLH1 JASPAR yes 49344373
chr16 12542203 12542213 TFAP4 JASPAR yes 9581701
chr16 12542203 12542213 TFAP4 JASPAR yes 49344374
chr16 12542235 12542249 EBF1 JASPAR yes 9581702
chr16 12542235 12542249 EBF1 JASPAR yes 49344375
chr16 12542236 12542252 ZNF143 JASPAR yes 9581703
chr16 12542236 12542252 ZNF143 JASPAR yes 49344376
chr16 12542240 12542251 DMRT3 JASPAR yes 9581704
chr16 12542240 12542251 DMRT3 JASPAR yes 49344377
chr16 12542271 12542283 GRHL1 JASPAR yes 9581705
chr16 12542271 12542283 GRHL1 JASPAR yes 49344378
chr16 12542276 12542289 POU2F2 JASPAR yes 9581706
chr16 12542276 12542289 POU2F2 JASPAR yes 49344379
chr16 12542282 12542289 TBP TRANSFAC yes 9581707
chr16 12542282 12542289 TFIID TRANSFAC yes 9581708
chr16 12542282 12542289 TBP TRANSFAC yes 49344380
chr16 12542282 12542289 TFIID TRANSFAC yes 49344381
chr16 12542297 12542308 PHOX2A JASPAR yes 9581709
chr16 12542297 12542308 PHOX2A JASPAR yes 49344382
chr16 12542325 12542340 FOXP1 JASPAR yes 9581710
chr16 12542325 12542340 FOXP1 JASPAR yes 49344383
chr16 12542327 12542342 FOXP1 JASPAR yes 9581711
chr16 12542327 12542342 FOXP1 JASPAR yes 49344384
chr16 12542328 12542343 FOXP1 JASPAR yes 9581712
chr16 12542328 12542343 FOXP1 JASPAR yes 49344385
chr16 12542329 12542344 FOXP1 JASPAR yes 9581713
chr16 12542329 12542344 FOXP1 JASPAR yes 49344386
chr16 12542331 12542346 MEF2C JASPAR yes 9581714
chr16 12542331 12542346 MEF2C JASPAR yes 49344387
SNP sites on vista21918[chr16:12541943-12542343]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 12542065 rs79672215 C T
ESR1 SPDEF
4328345
chr16 12542090 rs186022905 T C
RELA
4328346
chr16 12542105 rs140458527 C T
RARA
4328347
chr16 12542186 rs146716645 G GT no 4328348
chr16 12542321 rs568655582 G C no 4328349
chr16 12542328 rs5815689 C CT
FOXP1
4328350
Genes possibly regulated by vista21918[chr16:12541943-12542343]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista21918[chr16:12541943-12542343]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results