EnhancerDB
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  3. vista21924[chr16:12630003-12630276]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21924[chr16:12630003-12630276]
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Tissue distribution of vista21924
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Transcription factor that possibly regulate vista21924[chr16:12630003-12630276]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 12629495 12630045 REST UCSC Txn Factor no Conserved 108182947
chr16 12629894 12630373 NFIC UCSC Txn Factor no Conserved 108182954
chr16 12629898 12630344 ATF2 UCSC Txn Factor no Conserved 108182956
chr16 12629918 12630311 RUNX3 UCSC Txn Factor no Conserved 108182960
chr16 12629954 12630291 BATF UCSC Txn Factor no Conserved 108182968
chr16 12629987 12630306 EBF1 UCSC Txn Factor no Conserved 108182982
chr16 12630023 12630037 MTF1 JASPAR yes 49344620
chr16 12630042 12630050 GATA3 JASPAR yes 49344621
chr16 12630052 12630069 PAX9 JASPAR yes 49344622
chr16 12630053 12630072 PAX5 JASPAR yes 49344623
chr16 12630062 12630073 NFE2L2 JASPAR yes 49344624
chr16 12630065 12630071 JUN TRANSFAC yes 49344625
chr16 12630078 12630083 H4TF1 TRANSFAC yes 49344626
chr16 12630085 12630100 FOXP1 JASPAR yes 49344627
chr16 12630091 12630107 POU4F2 JASPAR yes 49344628
chr16 12630096 12630109 POU2F2 JASPAR yes 49344629
chr16 12630129 12630136 PEA3 TRANSFAC yes 49344630
chr16 12630150 12630165 STAT1 JASPAR yes 49344631
chr16 12630152 12630163 STAT1 JASPAR yes 49344632
chr16 12630152 12630163 STAT3 JASPAR yes 49344633
chr16 12630153 12630161 STAT6 TRANSFAC yes 49344634
chr16 12630157 12630162 ETS2 TRANSFAC yes 49344635
chr16 12630166 12630177 CEBPA JASPAR yes 49344636
chr16 12630172 12630188 POU4F2 JASPAR yes 49344637
chr16 12630172 12630188 POU4F3 JASPAR yes 49344638
chr16 12630174 12630188 POU4F1 JASPAR yes 49344639
chr16 12630187 12630198 FLI1 JASPAR yes 49344640
chr16 12630204 12630208 NFE TRANSFAC yes 49344641
chr16 12630210 12630222 INSM1 JASPAR yes 49344642
chr16 12630225 12630239 FOXF2 JASPAR yes 49344643
chr16 12630226 12630234 FOXG1 JASPAR yes 49344644
chr16 12630226 12630234 FOXO3 JASPAR yes 49344645
chr16 12630227 12630237 HOXC10 JASPAR yes 49344646
chr16 12630227 12630237 HOXD11 JASPAR yes 49344647
chr16 12630227 12630238 HOXA10 JASPAR yes 49344648
chr16 12630227 12630238 HOXC11 JASPAR yes 49344649
chr16 12630227 12630238 HOXC12 JASPAR yes 49344650
chr16 12630227 12630238 HOXD12 JASPAR yes 49344651
chr16 12630228 12630237 CDX1 JASPAR yes 49344652
chr16 12630228 12630239 CDX2 JASPAR yes 49344653
chr16 12630242 12630246 YY1 TRANSFAC yes 49344654
chr16 12630257 12630269 YY1 JASPAR yes 49344655
chr16 12630260 12630275 JUND JASPAR yes 49344656
chr16 12630261 12630274 JUN JASPAR yes 49344657
SNP sites on vista21924[chr16:12630003-12630276]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 12630016 rs529856299 C G,T
ATF2 BATF EBF1 NFIC REST RUNX3
4329447
chr16 12630050 rs115983779 G A
ATF2 BATF EBF1 GATA3 NFIC RUNX3
4329448
chr16 12630104 rs557374698 G T
ATF2 BATF EBF1 NFIC POU2F2 POU4F2 RUNX3
4329449
chr16 12630129 rs374268935 TGAG T
ATF2 BATF EBF1 NFIC PEA3 RUNX3
4329450
chr16 12630129 rs530101834 TGAG T
ATF2 BATF EBF1 NFIC PEA3 RUNX3
4329451
chr16 12630184 rs113090720 T C
ATF2 BATF EBF1 NFIC POU4F1 POU4F2 POU4F3 RUNX3
4329452
chr16 12630187 rs7189979 A C
ATF2 BATF EBF1 FLI1 NFIC POU4F1 POU4F2 POU4F3 RUNX3
4329453
chr16 12630226 rs185723815 C G
ATF2 BATF EBF1 FOXF2 FOXG1 FOXO3 NFIC RUNX3
4329454
Genes possibly regulated by vista21924[chr16:12630003-12630276]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista21924[chr16:12630003-12630276]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results