EnhancerDB
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  3. vista21938[chr16:13069429-13069750]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21938[chr16:13069429-13069750]
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Tissue distribution of vista21938
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Transcription factor that possibly regulate vista21938[chr16:13069429-13069750]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 13069431 13069441 GSC2 JASPAR yes 9615993
chr16 13069431 13069441 GSC JASPAR yes 9615994
chr16 13069431 13069441 GSC2 JASPAR yes 49345217
chr16 13069431 13069441 GSC JASPAR yes 49345218
chr16 13069432 13069440 OTX1 JASPAR yes 9615995
chr16 13069432 13069440 OTX2 JASPAR yes 9615996
chr16 13069432 13069440 OTX1 JASPAR yes 49345219
chr16 13069432 13069440 OTX2 JASPAR yes 49345220
chr16 13069432 13069441 PITX3 JASPAR yes 9615997
chr16 13069432 13069441 PITX3 JASPAR yes 49345221
chr16 13069434 13069448 FOXF2 JASPAR yes 9615998
chr16 13069434 13069448 FOXF2 JASPAR yes 49345222
chr16 13069436 13069447 FOXC1 JASPAR yes 9615999
chr16 13069436 13069447 FOXC1 JASPAR yes 49345223
chr16 13069436 13069448 FOXC2 JASPAR yes 9616000
chr16 13069436 13069448 FOXC2 JASPAR yes 49345224
chr16 13069436 13069450 POU1F1 JASPAR yes 9616001
chr16 13069436 13069450 POU1F1 JASPAR yes 49345225
chr16 13069437 13069449 FOXI1 JASPAR yes 9616002
chr16 13069437 13069449 POU3F1 JASPAR yes 9616003
chr16 13069437 13069449 POU3F2 JASPAR yes 9616004
chr16 13069437 13069449 FOXI1 JASPAR yes 49345226
chr16 13069437 13069449 POU3F1 JASPAR yes 49345227
chr16 13069437 13069449 POU3F2 JASPAR yes 49345228
chr16 13069437 13069450 POU3F3 JASPAR yes 9616005
chr16 13069437 13069450 POU3F3 JASPAR yes 49345229
chr16 13069438 13069450 POU2F1 JASPAR yes 9616006
chr16 13069438 13069450 POU2F1 JASPAR yes 49345230
chr16 13069439 13069447 FOXG1 JASPAR yes 9616007
chr16 13069439 13069447 FOXG1 JASPAR yes 49345231
chr16 13069440 13069448 FOXL1 JASPAR yes 9616008
chr16 13069440 13069448 FOXL1 JASPAR yes 49345232
chr16 13069444 13069458 RORA JASPAR yes 9616009
chr16 13069444 13069458 RORA JASPAR yes 49345233
chr16 13069446 13069450 YY1 TRANSFAC yes 9616010
chr16 13069446 13069450 YY1 TRANSFAC yes 49345234
chr16 13069451 13069466 ESR2 JASPAR yes 9616011
chr16 13069451 13069466 ESR2 JASPAR yes 49345235
chr16 13069451 13069471 ESR1 JASPAR yes 9616012
chr16 13069451 13069471 ESR1 JASPAR yes 49345236
chr16 13069455 13069465 EVX1 JASPAR yes 9616013
chr16 13069455 13069465 MEOX2 JASPAR yes 9616014
chr16 13069455 13069465 EVX1 JASPAR yes 49345237
chr16 13069455 13069465 MEOX2 JASPAR yes 49345238
chr16 13069461 13069476 PRDM1 JASPAR yes 9616015
chr16 13069461 13069476 PRDM1 JASPAR yes 49345239
chr16 13069486 13069506 RREB1 JASPAR yes 9616016
chr16 13069486 13069506 RREB1 JASPAR yes 49345240
chr16 13069491 13069511 RREB1 JASPAR yes 9616017
chr16 13069491 13069511 RREB1 JASPAR yes 49345241
chr16 13069492 13069502 SP1 JASPAR yes 9616018
chr16 13069492 13069502 SP1 JASPAR yes 49345242
chr16 13069494 13069499 SP1 TRANSFAC yes 9616019
chr16 13069494 13069499 SP1 TRANSFAC yes 49345243
chr16 13069498 13069512 PLAG1 JASPAR yes 9616020
chr16 13069498 13069512 PLAG1 JASPAR yes 49345244
chr16 13069499 13069504 SP1 TRANSFAC yes 9616021
chr16 13069499 13069504 SP1 TRANSFAC yes 49345245
chr16 13069501 13069511 SP1 JASPAR yes 9616022
chr16 13069501 13069511 SP1 JASPAR yes 49345246
chr16 13069502 13069522 RREB1 JASPAR yes 9616023
chr16 13069502 13069522 RREB1 JASPAR yes 49345247
chr16 13069506 13069521 NR2C2 JASPAR yes 9616024
chr16 13069506 13069521 NR2C2 JASPAR yes 49345248
chr16 13069507 13069514 SP1 TRANSFAC yes 9616025
chr16 13069507 13069514 SP1 TRANSFAC yes 49345249
chr16 13069507 13069517 SP1 JASPAR yes 9616026
chr16 13069507 13069517 SP1 JASPAR yes 49345250
chr16 13069507 13069521 PLAG1 JASPAR yes 9616027
chr16 13069507 13069521 PLAG1 JASPAR yes 49345251
chr16 13069507 13069528 ZNF263 JASPAR yes 9616028
chr16 13069507 13069528 ZNF263 JASPAR yes 49345252
chr16 13069508 13069516 SP1 TRANSFAC yes 9616029
chr16 13069508 13069516 SP1 TRANSFAC yes 49345253
chr16 13069509 13069514 SP1 TRANSFAC yes 9616030
chr16 13069509 13069514 SP1 TRANSFAC yes 49345254
chr16 13069509 13069520 E2F4 JASPAR yes 9616031
chr16 13069509 13069520 E2F4 JASPAR yes 49345255
chr16 13069510 13069515 SP1 TRANSFAC yes 9616032
chr16 13069510 13069515 SP1 TRANSFAC yes 49345256
chr16 13069510 13069516 SP1 TRANSFAC yes 9616033
chr16 13069510 13069516 SP1 TRANSFAC yes 49345257
chr16 13069510 13069520 SP1 JASPAR yes 9616034
chr16 13069510 13069520 SP1 JASPAR yes 49345258
chr16 13069511 13069521 ZNF740 JASPAR yes 9616035
chr16 13069511 13069521 ZNF740 JASPAR yes 49345259
chr16 13069512 13069522 SP1 JASPAR yes 9616036
chr16 13069512 13069522 ZNF740 JASPAR yes 9616037
chr16 13069512 13069522 SP1 JASPAR yes 49345260
chr16 13069512 13069522 ZNF740 JASPAR yes 49345261
chr16 13069514 13069529 NR2C2 JASPAR yes 9616038
chr16 13069514 13069529 NR2C2 JASPAR yes 49345262
chr16 13069514 13069532 RARA JASPAR yes 9616039
chr16 13069514 13069532 RARA JASPAR yes 49345263
chr16 13069524 13069528 LFA1 TRANSFAC yes 9616040
chr16 13069524 13069528 LFA1 TRANSFAC yes 49345264
chr16 13069533 13069545 MEF2B JASPAR yes 9616041
chr16 13069533 13069545 MEF2B JASPAR yes 49345265
chr16 13069545 13069563 SRF JASPAR yes 9616042
chr16 13069545 13069563 SRF JASPAR yes 49345266
chr16 13069547 13069565 SRF JASPAR yes 9616043
chr16 13069547 13069565 SRF JASPAR yes 49345267
chr16 13069573 13069585 POU2F1 JASPAR yes 9616044
chr16 13069573 13069585 POU2F1 JASPAR yes 49345268
chr16 13069575 13069585 NFATC3 JASPAR yes 9616045
chr16 13069575 13069585 NFATC3 JASPAR yes 49345269
chr16 13069588 13069593 SP1 TRANSFAC yes 9616046
chr16 13069588 13069593 SP1 TRANSFAC yes 49345270
chr16 13069591 13069601 SP1 JASPAR yes 9616047
chr16 13069591 13069601 SP1 JASPAR yes 49345271
chr16 13069595 13069605 SP1 JASPAR yes 9616048
chr16 13069595 13069605 SP1 JASPAR yes 49345272
chr16 13069597 13069603 MAZ TRANSFAC yes 9616049
chr16 13069597 13069603 MAZ TRANSFAC yes 49345273
chr16 13069597 13069607 SP1 JASPAR yes 9616050
chr16 13069597 13069607 SP1 JASPAR yes 49345274
chr16 13069598 13069608 MZF1 JASPAR yes 9616051
chr16 13069598 13069608 MZF1 JASPAR yes 49345275
chr16 13069598 13069619 ZNF263 JASPAR yes 9616052
chr16 13069598 13069619 ZNF263 JASPAR yes 49345276
chr16 13069602 13069623 ZNF263 JASPAR yes 9616053
chr16 13069602 13069623 ZNF263 JASPAR yes 49345277
chr16 13069607 13069617 NFATC3 JASPAR yes 9616054
chr16 13069607 13069617 NFATC3 JASPAR yes 49345278
chr16 13069609 13069616 NFATC2 JASPAR yes 9616055
chr16 13069609 13069616 NFATC2 JASPAR yes 49345279
chr16 13069614 13069634 PPARG JASPAR yes 9616056
chr16 13069614 13069634 PPARG JASPAR yes 49345280
chr16 13069615 13069626 E2F6 JASPAR yes 9616057
chr16 13069615 13069626 E2F6 JASPAR yes 49345281
chr16 13069619 13069624 ETS2 TRANSFAC yes 9616058
chr16 13069619 13069624 ETS2 TRANSFAC yes 49345282
chr16 13069621 13069633 YY1 JASPAR yes 9616059
chr16 13069621 13069633 YY1 JASPAR yes 49345283
chr16 13069624 13069630 YY1 JASPAR yes 9616060
chr16 13069624 13069630 YY1 JASPAR yes 49345284
chr16 13069635 13069639 YY1 TRANSFAC yes 9616061
chr16 13069635 13069639 YY1 TRANSFAC yes 49345285
chr16 13069652 13069656 ESR1 TRANSFAC yes 9616062
chr16 13069652 13069656 ESR1 TRANSFAC yes 49345286
chr16 13069684 13069694 SREBF1 JASPAR yes 9616063
chr16 13069684 13069694 SREBF1 JASPAR yes 49345287
chr16 13069704 13069709 GATA2 JASPAR yes 9616064
chr16 13069704 13069709 GATA2 JASPAR yes 49345288
chr16 13069716 13069720 YY1 TRANSFAC yes 9616065
chr16 13069716 13069720 YY1 TRANSFAC yes 49345289
chr16 13069720 13069724 YY1 TRANSFAC yes 9616066
chr16 13069720 13069724 YY1 TRANSFAC yes 49345290
chr16 13069733 13069748 FOXP1 JASPAR yes 9616067
chr16 13069733 13069748 FOXP1 JASPAR yes 49345291
chr16 13069734 13069749 FOXP1 JASPAR yes 9616068
chr16 13069734 13069749 FOXP1 JASPAR yes 49345292
chr16 13069735 13069750 FOXP1 JASPAR yes 9616069
chr16 13069735 13069750 FOXP1 JASPAR yes 49345293
SNP sites on vista21938[chr16:13069429-13069750]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 13069498 rs12934361 G A
PLAG1 RREB1 SP1
4335321
chr16 13069507 rs566435327 C T
NR2C2 PLAG1 RREB1 SP1 ZNF263
4335322
chr16 13069512 rs113976418 G T
E2F4 NR2C2 PLAG1 RREB1 SP1 ZNF263 ZNF740
4335323
chr16 13069521 rs558512741 G T
NR2C2 PLAG1 RARA RREB1 SP1 ZNF263 ZNF740
4335324
chr16 13069562 rs368318022 A C,G
SRF
4335325
chr16 13069636 rs529078092 T A
YY1
4335326
chr16 13069734 rs113369786 AT A
FOXP1
4335327
Genes possibly regulated by vista21938[chr16:13069429-13069750]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 12995477 13334272 + SHISA9 ENSG00000237515.6 12995477 0.93 0.97 14559 26048
Expression level of Genes
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miRNAs possibly regulated by vista21938[chr16:13069429-13069750]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 14397874 14397895 + hsa-miR-193b-3p MIMAT0002819 14396137 0.1682645140494907 0.742986 0.0 599
Expression level of miRNAs
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