EnhancerDB
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  3. vista21940[chr16:13164381-13164582]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21940[chr16:13164381-13164582]
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Tissue distribution of vista21940
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Transcription factor that possibly regulate vista21940[chr16:13164381-13164582]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 13164396 13164401 ETS2 TRANSFAC yes 9622901
chr16 13164396 13164401 ETS2 TRANSFAC yes 49345365
chr16 13164399 13164404 ETS2 TRANSFAC yes 9622902
chr16 13164399 13164404 ETS2 TRANSFAC yes 49345366
chr16 13164407 13164425 SRF JASPAR yes 9622903
chr16 13164407 13164425 SRF JASPAR yes 49345367
chr16 13164408 13164412 NFE TRANSFAC yes 9622904
chr16 13164408 13164412 NFE TRANSFAC yes 49345368
chr16 13164412 13164422 NOTO JASPAR yes 9622905
chr16 13164412 13164422 NOTO JASPAR yes 49345369
chr16 13164441 13164455 GLIS3 JASPAR yes 9622906
chr16 13164441 13164455 GLIS3 JASPAR yes 49345370
chr16 13164455 13164468 POU3F3 JASPAR yes 9622907
chr16 13164455 13164468 POU3F3 JASPAR yes 49345371
chr16 13164458 13164469 STAT3 JASPAR yes 9622908
chr16 13164458 13164469 STAT3 JASPAR yes 49345372
chr16 13164479 13164484 ETS2 TRANSFAC yes 9622909
chr16 13164479 13164484 ETS2 TRANSFAC yes 49345373
chr16 13164486 13164493 SP1 TRANSFAC yes 9622910
chr16 13164486 13164493 SP1 TRANSFAC yes 49345374
chr16 13164486 13164496 SP1 JASPAR yes 9622911
chr16 13164486 13164496 SP1 JASPAR yes 49345375
chr16 13164487 13164495 SP1 TRANSFAC yes 9622912
chr16 13164487 13164495 SP1 TRANSFAC yes 49345376
chr16 13164487 13164496 SP1 TRANSFAC yes 9622913
chr16 13164487 13164496 SP1 TRANSFAC yes 49345377
chr16 13164488 13164493 SP1 TRANSFAC yes 9622914
chr16 13164488 13164493 SP1 TRANSFAC yes 49345378
chr16 13164489 13164494 SP1 TRANSFAC yes 9622915
chr16 13164489 13164494 SP1 TRANSFAC yes 49345379
chr16 13164489 13164495 SP1 TRANSFAC yes 9622916
chr16 13164489 13164495 SP1 TRANSFAC yes 49345380
chr16 13164493 13164497 LFA1 TRANSFAC yes 9622917
chr16 13164493 13164497 LFA1 TRANSFAC yes 49345381
chr16 13164512 13164532 TBX19 JASPAR yes 9622918
chr16 13164512 13164532 TBX19 JASPAR yes 49345382
chr16 13164514 13164517 MYB TRANSFAC yes 9622919
chr16 13164514 13164517 MYB TRANSFAC yes 49345383
chr16 13164514 13164522 MGA JASPAR yes 9622920
chr16 13164514 13164522 TBX15 JASPAR yes 9622921
chr16 13164514 13164522 TBX1 JASPAR yes 9622922
chr16 13164514 13164522 TBX4 JASPAR yes 9622923
chr16 13164514 13164522 TBX5 JASPAR yes 9622924
chr16 13164514 13164522 MGA JASPAR yes 49345384
chr16 13164514 13164522 TBX15 JASPAR yes 49345385
chr16 13164514 13164522 TBX1 JASPAR yes 49345386
chr16 13164514 13164522 TBX4 JASPAR yes 49345387
chr16 13164514 13164522 TBX5 JASPAR yes 49345388
chr16 13164514 13164530 T JASPAR yes 9622925
chr16 13164514 13164530 T JASPAR yes 49345389
chr16 13164531 13164546 FOXA1 JASPAR yes 9622926
chr16 13164531 13164546 FOXA1 JASPAR yes 49345390
chr16 13164535 13164546 FOXA1 JASPAR yes 9622927
chr16 13164535 13164546 FOXA1 JASPAR yes 49345391
chr16 13164546 13164556 MEF2A JASPAR yes 9622928
chr16 13164546 13164556 MEF2A JASPAR yes 49345392
chr16 13164546 13164563 BCL6B JASPAR yes 9622929
chr16 13164546 13164563 BCL6B JASPAR yes 49345393
chr16 13164562 13164572 EMX1 JASPAR yes 9622930
chr16 13164562 13164572 EVX1 JASPAR yes 9622931
chr16 13164562 13164572 EVX2 JASPAR yes 9622932
chr16 13164562 13164572 HOXA2 JASPAR yes 9622933
chr16 13164562 13164572 HOXB3 JASPAR yes 9622934
chr16 13164562 13164572 NOTO JASPAR yes 9622935
chr16 13164562 13164572 EMX1 JASPAR yes 49345394
chr16 13164562 13164572 EVX1 JASPAR yes 49345395
chr16 13164562 13164572 EVX2 JASPAR yes 49345396
chr16 13164562 13164572 HOXA2 JASPAR yes 49345397
chr16 13164562 13164572 HOXB3 JASPAR yes 49345398
chr16 13164562 13164572 NOTO JASPAR yes 49345399
chr16 13164565 13164569 YY1 TRANSFAC yes 9622936
chr16 13164565 13164569 YY1 TRANSFAC yes 49345400
chr16 13164581 13164586 MYC TRANSFAC yes 9622937
chr16 13164581 13164586 MYC TRANSFAC yes 49345401
SNP sites on vista21940[chr16:13164381-13164582]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 13164446 rs536350671 A G
GLIS3
4336150
chr16 13164456 rs139342807 A C
POU3F3
4336151
chr16 13164475 rs538473752 A G no 4336152
chr16 13164562 rs369199002 C T
BCL6B EMX1 EVX1 EVX2 HOXA2 HOXB3 NOTO
4336153
chr16 13164575 rs28622238 A G no 4336154
Genes possibly regulated by vista21940[chr16:13164381-13164582]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista21940[chr16:13164381-13164582]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 14397874 14397895 + hsa-miR-193b-3p MIMAT0002819 14396137 0.18360859278450578 0.742986 0.0 599
Expression level of miRNAs
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