EnhancerDB
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  3. vista21962[chr16:14402100-14402342]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21962[chr16:14402100-14402342]
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Tissue distribution of vista21962
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Transcription factor that possibly regulate vista21962[chr16:14402100-14402342]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 14401902 14402372 GATA3 UCSC Txn Factor no Conserved 108184012
chr16 14402129 14402135 YY1 JASPAR yes 9681347
chr16 14402129 14402135 YY1 JASPAR yes 49346697
chr16 14402144 14402149 GATA2 JASPAR yes 9681348
chr16 14402144 14402149 GATA2 JASPAR yes 49346698
chr16 14402174 14402187 SMAD2 JASPAR yes 9681349
chr16 14402174 14402187 SMAD2 JASPAR yes 49346699
chr16 14402191 14402204 NFKB2 JASPAR yes 9681350
chr16 14402191 14402204 NFKB2 JASPAR yes 49346700
chr16 14402192 14402204 MYBL1 JASPAR yes 9681351
chr16 14402192 14402204 MYBL1 JASPAR yes 49346701
chr16 14402197 14402200 MYB TRANSFAC yes 9681352
chr16 14402197 14402200 MYB TRANSFAC yes 49346702
chr16 14402222 14402235 SMAD2 JASPAR yes 9681353
chr16 14402222 14402235 SMAD2 JASPAR yes 49346703
chr16 14402236 14402240 LFA1 TRANSFAC yes 9681354
chr16 14402236 14402240 LFA1 TRANSFAC yes 49346704
chr16 14402237 14402249 ZBTB7A JASPAR yes 9681355
chr16 14402237 14402249 ZBTB7A JASPAR yes 49346705
chr16 14402240 14402249 ZEB1 JASPAR yes 9681356
chr16 14402240 14402249 ZEB1 JASPAR yes 49346706
chr16 14402240 14402255 ZIC3 JASPAR yes 9681357
chr16 14402240 14402255 ZIC4 JASPAR yes 9681358
chr16 14402240 14402255 ZIC3 JASPAR yes 49346707
chr16 14402240 14402255 ZIC4 JASPAR yes 49346708
chr16 14402241 14402251 TCF3 JASPAR yes 9681359
chr16 14402241 14402251 TCF4 JASPAR yes 9681360
chr16 14402241 14402251 TCF3 JASPAR yes 49346709
chr16 14402241 14402251 TCF4 JASPAR yes 49346710
chr16 14402242 14402251 SNAI2 JASPAR yes 9681361
chr16 14402242 14402251 SNAI2 JASPAR yes 49346711
chr16 14402243 14402248 USF2 TRANSFAC yes 9681362
chr16 14402243 14402248 USF2 TRANSFAC yes 49346712
chr16 14402252 14402266 NR2F1 JASPAR yes 9681363
chr16 14402252 14402266 NR2F1 JASPAR yes 49346713
chr16 14402268 14402280 TFAP2A JASPAR yes 9681364
chr16 14402268 14402280 TFAP2B JASPAR yes 9681365
chr16 14402268 14402280 TFAP2A JASPAR yes 49346714
chr16 14402268 14402280 TFAP2B JASPAR yes 49346715
chr16 14402273 14402278 TFAP2A TRANSFAC yes 9681366
chr16 14402273 14402278 TFAP2A TRANSFAC yes 49346716
chr16 14402273 14402279 MZF1 JASPAR yes 9681367
chr16 14402273 14402279 MZF1 JASPAR yes 49346717
chr16 14402275 14402280 ETS2 TRANSFAC yes 9681368
chr16 14402275 14402280 ETS2 TRANSFAC yes 49346718
chr16 14402318 14402337 CTCF JASPAR yes 9681369
chr16 14402318 14402337 CTCF JASPAR yes 49346719
chr16 14402327 14402333 YY1 JASPAR yes 9681370
chr16 14402327 14402333 YY1 JASPAR yes 49346720
chr16 14402330 14402340 ID4 JASPAR yes 9681371
chr16 14402330 14402340 TCF4 JASPAR yes 9681372
chr16 14402330 14402340 ID4 JASPAR yes 49346721
chr16 14402330 14402340 TCF4 JASPAR yes 49346722
chr16 14402332 14402337 USF2 TRANSFAC yes 9681373
chr16 14402332 14402337 USF2 TRANSFAC yes 49346723
SNP sites on vista21962[chr16:14402100-14402342]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 14402265 rs30231 T C
GATA3 NR2F1
4342523
chr16 14402333 rs138713862 C T
CTCF GATA3 ID4 TCF4 USF2 YY1
4342524
chr16 14402337 rs30230 T C
CTCF GATA3 ID4 TCF4 USF2
4342525
chr16 14402338 rs144010520 G A
GATA3 ID4 TCF4
4342526
Genes possibly regulated by vista21962[chr16:14402100-14402342]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista21962[chr16:14402100-14402342]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results