EnhancerDB
  1. Home
  2. Enhancers
  3. vista21979[chr16:15498743-15498890]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21979[chr16:15498743-15498890]
Back to top
Tissue distribution of vista21979
Back to top
Transcription factor that possibly regulate vista21979[chr16:15498743-15498890]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 15498792 15499076 NR3C1 UCSC Txn Factor no Conserved 108184265
chr16 15498771 15498792 REST JASPAR yes 9722081
chr16 15498771 15498792 REST JASPAR yes 49347306
chr16 15498786 15498803 RARA JASPAR yes 9722082
chr16 15498786 15498803 RARA JASPAR yes 49347307
chr16 15498799 15498810 HOXA10 JASPAR yes 9722083
chr16 15498799 15498810 HOXA10 JASPAR yes 49347308
chr16 15498799 15498814 HNF1A JASPAR yes 9722084
chr16 15498799 15498814 HNF1A JASPAR yes 49347309
chr16 15498800 15498810 GSX2 JASPAR yes 9722085
chr16 15498800 15498810 HOXB2 JASPAR yes 9722086
chr16 15498800 15498810 HOXB3 JASPAR yes 9722087
chr16 15498800 15498810 MNX1 JASPAR yes 9722088
chr16 15498800 15498810 POU6F1 JASPAR yes 9722089
chr16 15498800 15498810 GSX2 JASPAR yes 49347310
chr16 15498800 15498810 HOXB2 JASPAR yes 49347311
chr16 15498800 15498810 HOXB3 JASPAR yes 49347312
chr16 15498800 15498810 MNX1 JASPAR yes 49347313
chr16 15498800 15498810 POU6F1 JASPAR yes 49347314
chr16 15498801 15498809 LMX1A JASPAR yes 9722090
chr16 15498801 15498809 LMX1B JASPAR yes 9722091
chr16 15498801 15498809 NKX6-1 JASPAR yes 9722092
chr16 15498801 15498809 NKX6-2 JASPAR yes 9722093
chr16 15498801 15498809 VAX1 JASPAR yes 9722094
chr16 15498801 15498809 VAX2 JASPAR yes 9722095
chr16 15498801 15498809 VSX1 JASPAR yes 9722096
chr16 15498801 15498809 VSX2 JASPAR yes 9722097
chr16 15498801 15498809 LMX1A JASPAR yes 49347315
chr16 15498801 15498809 LMX1B JASPAR yes 49347316
chr16 15498801 15498809 NKX6-1 JASPAR yes 49347317
chr16 15498801 15498809 NKX6-2 JASPAR yes 49347318
chr16 15498801 15498809 VAX1 JASPAR yes 49347319
chr16 15498801 15498809 VAX2 JASPAR yes 49347320
chr16 15498801 15498809 VSX1 JASPAR yes 49347321
chr16 15498801 15498809 VSX2 JASPAR yes 49347322
chr16 15498802 15498817 MEF2A JASPAR yes 9722098
chr16 15498802 15498817 MEF2A JASPAR yes 49347323
chr16 15498803 15498818 MEF2C JASPAR yes 9722099
chr16 15498803 15498818 MEF2C JASPAR yes 49347324
chr16 15498804 15498816 MEF2A JASPAR yes 9722100
chr16 15498804 15498816 MEF2B JASPAR yes 9722101
chr16 15498804 15498816 MEF2D JASPAR yes 9722102
chr16 15498804 15498816 MEF2A JASPAR yes 49347325
chr16 15498804 15498816 MEF2B JASPAR yes 49347326
chr16 15498804 15498816 MEF2D JASPAR yes 49347327
chr16 15498805 15498815 MEF2A JASPAR yes 9722103
chr16 15498805 15498815 MEF2A JASPAR yes 49347328
chr16 15498806 15498810 YY1 TRANSFAC yes 9722104
chr16 15498806 15498810 YY1 TRANSFAC yes 49347329
chr16 15498816 15498827 USF2 JASPAR yes 9722105
chr16 15498816 15498827 USF2 JASPAR yes 49347330
chr16 15498841 15498854 NFKB1 JASPAR yes 9722106
chr16 15498841 15498854 NFKB2 JASPAR yes 9722107
chr16 15498841 15498854 NFKB1 JASPAR yes 49347331
chr16 15498841 15498854 NFKB2 JASPAR yes 49347332
chr16 15498842 15498852 NFKB1 JASPAR yes 9722108
chr16 15498842 15498852 RELA JASPAR yes 9722109
chr16 15498842 15498852 NFKB1 JASPAR yes 49347333
chr16 15498842 15498852 RELA JASPAR yes 49347334
chr16 15498842 15498853 NFKB1 JASPAR yes 9722110
chr16 15498842 15498853 NFKB1 JASPAR yes 49347335
chr16 15498867 15498884 RARA JASPAR yes 9722111
chr16 15498867 15498884 RXRA JASPAR yes 9722112
chr16 15498867 15498884 RARA JASPAR yes 49347336
chr16 15498867 15498884 RXRA JASPAR yes 49347337
chr16 15498879 15498900 ZNF263 JASPAR yes 9722113
chr16 15498879 15498900 ZNF263 JASPAR yes 49347338
chr16 15498884 15498905 IRF1 JASPAR yes 9722114
chr16 15498884 15498905 IRF1 JASPAR yes 49347339
chr16 15498886 15498901 PRDM1 JASPAR yes 9722115
chr16 15498886 15498901 PRDM1 JASPAR yes 49347340
chr16 15498888 15498909 ZNF263 JASPAR yes 9722116
chr16 15498888 15498909 ZNF263 JASPAR yes 49347341
SNP sites on vista21979[chr16:15498743-15498890]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 15498773 rs222906 G C
REST
4345759
chr16 15498807 rs222907 T C
GSX2 HNF1A HOXA10 HOXB2 HOXB3 LMX1A LMX1B MEF2A MEF2B MEF2C MEF2D MNX1 NKX6-1 NKX6-2 NR3C1 POU6F1 VAX1 VAX2 VSX1 VSX2 YY1
4345760
chr16 15498836 rs190441651 G A
NR3C1
4345761
Genes possibly regulated by vista21979[chr16:15498743-15498890]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 15457516 15474904 - NPIPA5 ENSG00000183793.9 15474904 0.73 1.0 14573 76161
chr16 15489611 15507125 + MPV17L ENSG00000156968.8 15489611 0.79 0.98 14575 90868
chr16 15489611 15609205 + RP11-1021N1.1 ENSG00000261130.1 15489611 0.94 0.94 14574 90868
chr16 15528152 15718885 + C16orf45 ENSG00000166780.6 15528152 0.73 1.0 14576 70738
Expression level of Genes
Back to top
miRNAs possibly regulated by vista21979[chr16:15498743-15498890]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results