EnhancerDB
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  3. vista21997[chr16:16055043-16055430]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista21997[chr16:16055043-16055430]
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Tissue distribution of vista21997
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Transcription factor that possibly regulate vista21997[chr16:16055043-16055430]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 16054994 16055320 RUNX3 UCSC Txn Factor no Conserved 108185236
chr16 16055034 16055044 HOXA13 JASPAR yes 9755903
chr16 16055034 16055044 HOXB13 JASPAR yes 9755904
chr16 16055034 16055044 HOXC10 JASPAR yes 9755905
chr16 16055034 16055044 HOXD11 JASPAR yes 9755906
chr16 16055034 16055044 HOXD13 JASPAR yes 9755907
chr16 16055034 16055044 HOXA13 JASPAR yes 49348300
chr16 16055034 16055044 HOXB13 JASPAR yes 49348301
chr16 16055034 16055044 HOXC10 JASPAR yes 49348302
chr16 16055034 16055044 HOXD11 JASPAR yes 49348303
chr16 16055034 16055044 HOXD13 JASPAR yes 49348304
chr16 16055034 16055045 HOXA10 JASPAR yes 9755908
chr16 16055034 16055045 HOXC11 JASPAR yes 9755909
chr16 16055034 16055045 HOXC12 JASPAR yes 9755910
chr16 16055034 16055045 HOXC13 JASPAR yes 9755911
chr16 16055034 16055045 HOXD12 JASPAR yes 9755912
chr16 16055034 16055045 HOXA10 JASPAR yes 49348305
chr16 16055034 16055045 HOXC11 JASPAR yes 49348306
chr16 16055034 16055045 HOXC12 JASPAR yes 49348307
chr16 16055034 16055045 HOXC13 JASPAR yes 49348308
chr16 16055034 16055045 HOXD12 JASPAR yes 49348309
chr16 16055035 16055044 CDX1 JASPAR yes 9755913
chr16 16055035 16055044 CDX1 JASPAR yes 49348310
chr16 16055035 16055046 CDX2 JASPAR yes 9755914
chr16 16055035 16055046 CDX2 JASPAR yes 49348311
chr16 16055051 16055066 STAT1 JASPAR yes 9755915
chr16 16055051 16055066 STAT1 JASPAR yes 49348312
chr16 16055053 16055064 STAT1 JASPAR yes 9755916
chr16 16055053 16055064 STAT3 JASPAR yes 9755917
chr16 16055053 16055064 STAT1 JASPAR yes 49348313
chr16 16055053 16055064 STAT3 JASPAR yes 49348314
chr16 16055066 16055069 MYB TRANSFAC yes 9755918
chr16 16055066 16055069 MYB TRANSFAC yes 49348315
chr16 16055095 16055105 RELA JASPAR yes 9755919
chr16 16055095 16055105 RELA JASPAR yes 49348316
chr16 16055096 16055107 NFKB1 JASPAR yes 9755920
chr16 16055096 16055107 NFKB1 JASPAR yes 49348317
chr16 16055102 16055108 MZF1 JASPAR yes 9755921
chr16 16055102 16055108 MZF1 JASPAR yes 49348318
chr16 16055109 16055115 MZF1 JASPAR yes 9755922
chr16 16055109 16055115 MZF1 JASPAR yes 49348319
chr16 16055113 16055118 MYC TRANSFAC yes 9755923
chr16 16055113 16055118 MYC TRANSFAC yes 49348320
chr16 16055116 16055131 LEF1 JASPAR yes 9755924
chr16 16055116 16055131 LEF1 JASPAR yes 49348321
chr16 16055117 16055131 TCF7L2 JASPAR yes 9755925
chr16 16055117 16055131 TCF7L2 JASPAR yes 49348322
chr16 16055119 16055126 TCF4 TRANSFAC yes 9755926
chr16 16055119 16055126 TCF4 TRANSFAC yes 49348323
chr16 16055119 16055127 TCF4 TRANSFAC yes 9755927
chr16 16055119 16055127 TCF4 TRANSFAC yes 49348324
chr16 16055120 16055126 LEF1 TRANSFAC yes 9755928
chr16 16055120 16055126 TCF4 TRANSFAC yes 9755929
chr16 16055120 16055126 LEF1 TRANSFAC yes 49348325
chr16 16055120 16055126 TCF4 TRANSFAC yes 49348326
chr16 16055130 16055138 E2F1 JASPAR yes 9755930
chr16 16055130 16055138 E2F1 JASPAR yes 49348327
chr16 16055166 16055181 RUNX2 JASPAR yes 9755931
chr16 16055166 16055181 RUNX2 JASPAR yes 49348328
chr16 16055169 16055180 RUNX1 JASPAR yes 9755932
chr16 16055169 16055180 RUNX1 JASPAR yes 49348329
chr16 16055171 16055180 RUNX2 JASPAR yes 9755933
chr16 16055171 16055180 RUNX2 JASPAR yes 49348330
chr16 16055197 16055208 STAT3 JASPAR yes 9755934
chr16 16055197 16055208 STAT3 JASPAR yes 49348331
chr16 16055197 16055212 HSF1 JASPAR yes 9755935
chr16 16055197 16055212 HSF1 JASPAR yes 49348332
chr16 16055221 16055233 TAL1 JASPAR yes 9755936
chr16 16055221 16055233 TAL1 JASPAR yes 49348333
chr16 16055255 16055261 PEA3 TRANSFAC yes 9755937
chr16 16055255 16055261 PEA3 TRANSFAC yes 49348334
chr16 16055257 16055274 NR3C1 JASPAR yes 9755938
chr16 16055257 16055274 NR3C2 JASPAR yes 9755939
chr16 16055257 16055274 NR3C1 JASPAR yes 49348335
chr16 16055257 16055274 NR3C2 JASPAR yes 49348336
chr16 16055257 16055275 NR3C1 JASPAR yes 9755940
chr16 16055257 16055275 NR3C1 JASPAR yes 49348337
chr16 16055277 16055283 LEF1 TRANSFAC yes 9755941
chr16 16055277 16055283 SOX10 JASPAR yes 9755942
chr16 16055277 16055283 LEF1 TRANSFAC yes 49348338
chr16 16055277 16055283 SOX10 JASPAR yes 49348339
chr16 16055285 16055297 POU2F1 JASPAR yes 9755943
chr16 16055285 16055297 POU2F1 JASPAR yes 49348340
chr16 16055285 16055298 POU3F3 JASPAR yes 9755944
chr16 16055285 16055298 POU3F3 JASPAR yes 49348341
chr16 16055287 16055296 POU5F1B JASPAR yes 9755945
chr16 16055287 16055296 POU5F1B JASPAR yes 49348342
chr16 16055305 16055320 HSF1 JASPAR yes 9755946
chr16 16055305 16055320 HSF1 JASPAR yes 49348343
chr16 16055306 16055319 HSF1 JASPAR yes 9755947
chr16 16055306 16055319 HSF2 JASPAR yes 9755948
chr16 16055306 16055319 HSF4 JASPAR yes 9755949
chr16 16055306 16055319 HSF1 JASPAR yes 49348344
chr16 16055306 16055319 HSF2 JASPAR yes 49348345
chr16 16055306 16055319 HSF4 JASPAR yes 49348346
chr16 16055311 16055324 HSF2 JASPAR yes 9755950
chr16 16055311 16055324 HSF2 JASPAR yes 49348347
chr16 16055322 16055326 TEAD2 TRANSFAC yes 9755951
chr16 16055322 16055326 TEAD2 TRANSFAC yes 49348348
chr16 16055322 16055327 TBP TRANSFAC yes 9755952
chr16 16055322 16055327 TBP TRANSFAC yes 49348349
chr16 16055326 16055347 IRF1 JASPAR yes 9755953
chr16 16055326 16055347 IRF1 JASPAR yes 49348350
chr16 16055330 16055345 PRDM1 JASPAR yes 9755954
chr16 16055330 16055345 STAT2 JASPAR yes 9755955
chr16 16055330 16055345 PRDM1 JASPAR yes 49348351
chr16 16055330 16055345 STAT2 JASPAR yes 49348352
chr16 16055330 16055348 IRF2 JASPAR yes 9755956
chr16 16055330 16055348 IRF2 JASPAR yes 49348353
chr16 16055331 16055343 IRF1 JASPAR yes 9755957
chr16 16055331 16055343 IRF1 JASPAR yes 49348354
chr16 16055342 16055355 HSF1 JASPAR yes 9755958
chr16 16055342 16055355 HSF1 JASPAR yes 49348355
chr16 16055350 16055361 E2F6 JASPAR yes 9755959
chr16 16055350 16055361 E2F6 JASPAR yes 49348356
chr16 16055357 16055367 SP1 JASPAR yes 9755960
chr16 16055357 16055367 SP1 JASPAR yes 49348357
chr16 16055360 16055375 HNF4A JASPAR yes 9755961
chr16 16055360 16055375 HNF4A JASPAR yes 49348358
chr16 16055361 16055376 HNF4G JASPAR yes 9755962
chr16 16055361 16055376 HNF4G JASPAR yes 49348359
chr16 16055365 16055371 LEF1 TRANSFAC yes 9755963
chr16 16055365 16055371 SOX10 JASPAR yes 9755964
chr16 16055365 16055371 LEF1 TRANSFAC yes 49348360
chr16 16055365 16055371 SOX10 JASPAR yes 49348361
chr16 16055367 16055382 STAT1 JASPAR yes 9755965
chr16 16055367 16055382 STAT1 JASPAR yes 49348362
chr16 16055369 16055380 STAT1 JASPAR yes 9755966
chr16 16055369 16055380 STAT3 JASPAR yes 9755967
chr16 16055369 16055380 STAT1 JASPAR yes 49348363
chr16 16055369 16055380 STAT3 JASPAR yes 49348364
chr16 16055386 16055396 CUX1 JASPAR yes 9755968
chr16 16055386 16055396 CUX2 JASPAR yes 9755969
chr16 16055386 16055396 CUX1 JASPAR yes 49348365
chr16 16055386 16055396 CUX2 JASPAR yes 49348366
SNP sites on vista21997[chr16:16055043-16055430]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 16055082 rs12923345 T C
RUNX3
4349603
chr16 16055106 rs74475935 C G
MZF1 NFKB1 RUNX3
4349604
chr16 16055218 rs112089837 T C
RUNX3
4349605
chr16 16055429 rs556279171 C A,T no 4349606
Genes possibly regulated by vista21997[chr16:16055043-16055430]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 15959577 15982482 - FOPNL ENSG00000133393.8 15982482 0.51 0.99 14580 27439
chr16 16043434 16236931 + ABCC1 ENSG00000103222.14 16043434 0.77 1.0 14581 88391
Expression level of Genes
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miRNAs possibly regulated by vista21997[chr16:16055043-16055430]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results