EnhancerDB
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  3. vista22[chr1:1093610-1093958]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22[chr1:1093610-1093958]
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Tissue distribution of vista22
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Transcription factor that possibly regulate vista22[chr1:1093610-1093958]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 1092697 1094172 POLR2A UCSC Txn Factor no Conserved 107801775
chr1 1093621 1093633 HINFP JASPAR yes 26185803
chr1 1093621 1093633 HINFP JASPAR yes 118214058
chr1 1093633 1093644 FLI1 JASPAR yes 26185804
chr1 1093633 1093644 FLI1 JASPAR yes 118214059
chr1 1093634 1093644 GABPA JASPAR yes 26185805
chr1 1093634 1093644 GABPA JASPAR yes 118214060
chr1 1093634 1093647 ELF1 JASPAR yes 26185806
chr1 1093634 1093647 ELF1 JASPAR yes 118214061
chr1 1093637 1093656 REST JASPAR yes 26185807
chr1 1093637 1093656 REST JASPAR yes 118214062
chr1 1093643 1093655 PKNOX2 JASPAR yes 26185808
chr1 1093643 1093655 PKNOX2 JASPAR yes 118214063
chr1 1093651 1093657 YY1 JASPAR yes 26185809
chr1 1093651 1093657 YY1 JASPAR yes 118214064
chr1 1093651 1093665 SPIC JASPAR yes 26185810
chr1 1093651 1093665 SPIC JASPAR yes 118214065
chr1 1093652 1093665 ELF1 JASPAR yes 26185811
chr1 1093652 1093665 ELF1 JASPAR yes 118214066
chr1 1093653 1093665 EHF JASPAR yes 26185812
chr1 1093653 1093665 ELF1 JASPAR yes 26185813
chr1 1093653 1093665 ELF4 JASPAR yes 26185814
chr1 1093653 1093665 EHF JASPAR yes 118214067
chr1 1093653 1093665 ELF1 JASPAR yes 118214068
chr1 1093653 1093665 ELF4 JASPAR yes 118214069
chr1 1093653 1093666 ELF3 JASPAR yes 26185815
chr1 1093653 1093666 ELF3 JASPAR yes 118214070
chr1 1093654 1093665 ELF5 JASPAR yes 26185816
chr1 1093654 1093665 ELF5 JASPAR yes 118214071
chr1 1093655 1093666 FLI1 JASPAR yes 26185817
chr1 1093655 1093666 FLI1 JASPAR yes 118214072
chr1 1093656 1093664 EHF JASPAR yes 26185818
chr1 1093656 1093664 FEV JASPAR yes 26185819
chr1 1093656 1093664 EHF JASPAR yes 118214073
chr1 1093656 1093664 FEV JASPAR yes 118214074
chr1 1093657 1093664 SPI1 JASPAR yes 26185820
chr1 1093657 1093664 SPI1 JASPAR yes 118214075
chr1 1093661 1093676 TFAP2A JASPAR yes 26185821
chr1 1093661 1093676 TFAP2A JASPAR yes 118214076
chr1 1093663 1093677 TLX1 JASPAR yes 26185822
chr1 1093663 1093677 TLX1 JASPAR yes 118214077
chr1 1093664 1093676 TFAP2A JASPAR yes 26185823
chr1 1093664 1093676 TFAP2B JASPAR yes 26185824
chr1 1093664 1093676 TFAP2C JASPAR yes 26185825
chr1 1093664 1093676 TFAP2A JASPAR yes 118214078
chr1 1093664 1093676 TFAP2B JASPAR yes 118214079
chr1 1093664 1093676 TFAP2C JASPAR yes 118214080
chr1 1093675 1093690 HNF4G JASPAR yes 26185826
chr1 1093675 1093690 HNF4G JASPAR yes 118214081
chr1 1093680 1093686 SOX10 JASPAR yes 26185827
chr1 1093680 1093686 SOX10 JASPAR yes 118214082
chr1 1093684 1093699 HNF4A JASPAR yes 26185828
chr1 1093684 1093699 HNF4A JASPAR yes 118214083
chr1 1093685 1093700 HNF4G JASPAR yes 26185829
chr1 1093685 1093700 HNF4G JASPAR yes 118214084
chr1 1093689 1093695 SOX10 JASPAR yes 26185830
chr1 1093689 1093695 SOX10 JASPAR yes 118214085
chr1 1093700 1093706 NFE2 TRANSFAC yes 26185831
chr1 1093700 1093706 NFE2 TRANSFAC yes 118214086
chr1 1093703 1093709 SP1 TRANSFAC yes 26185832
chr1 1093703 1093709 SP1 TRANSFAC yes 118214087
chr1 1093703 1093713 SP1 JASPAR yes 26185833
chr1 1093703 1093713 SP1 JASPAR yes 118214088
chr1 1093705 1093710 SP1 TRANSFAC yes 26185834
chr1 1093705 1093710 SP1 TRANSFAC yes 118214089
chr1 1093733 1093745 INSM1 JASPAR yes 26185835
chr1 1093733 1093745 INSM1 JASPAR yes 118214090
chr1 1093738 1093748 SP1 JASPAR yes 26185836
chr1 1093738 1093748 SP1 JASPAR yes 118214091
chr1 1093740 1093752 INSM1 JASPAR yes 26185837
chr1 1093740 1093752 INSM1 JASPAR yes 118214092
chr1 1093745 1093755 SP1 JASPAR yes 26185838
chr1 1093745 1093755 SP1 JASPAR yes 118214093
chr1 1093746 1093756 SP1 JASPAR yes 26185839
chr1 1093746 1093756 SP1 JASPAR yes 118214094
chr1 1093791 1093795 H4TF2 TRANSFAC yes 26185840
chr1 1093791 1093795 H4TF2 TRANSFAC yes 118214095
chr1 1093794 1093808 PLAG1 JASPAR yes 26185841
chr1 1093794 1093808 PLAG1 JASPAR yes 118214096
chr1 1093807 1093822 NR2C2 JASPAR yes 26185842
chr1 1093807 1093822 NR2C2 JASPAR yes 118214097
chr1 1093809 1093819 SP1 JASPAR yes 26185843
chr1 1093809 1093819 SP1 JASPAR yes 118214098
chr1 1093810 1093816 SP1 TRANSFAC yes 26185844
chr1 1093810 1093816 SP1 TRANSFAC yes 118214099
chr1 1093810 1093820 SP1 JASPAR yes 26185845
chr1 1093810 1093820 SP1 TRANSFAC yes 26185846
chr1 1093810 1093820 SP1 JASPAR yes 118214100
chr1 1093810 1093820 SP1 TRANSFAC yes 118214101
chr1 1093811 1093832 ZNF263 JASPAR yes 26185847
chr1 1093811 1093832 ZNF263 JASPAR yes 118214102
chr1 1093813 1093832 REST JASPAR yes 26185848
chr1 1093813 1093832 REST JASPAR yes 118214103
chr1 1093815 1093821 SP1 TRANSFAC yes 26185849
chr1 1093815 1093821 SP1 TRANSFAC yes 118214104
chr1 1093824 1093828 H4TF2 TRANSFAC yes 26185850
chr1 1093824 1093828 H4TF2 TRANSFAC yes 118214105
chr1 1093826 1093832 MZF1 JASPAR yes 26185851
chr1 1093826 1093832 MZF1 JASPAR yes 118214106
chr1 1093831 1093850 RFX2 JASPAR yes 26185852
chr1 1093831 1093850 RFX2 JASPAR yes 118214107
chr1 1093835 1093851 RFX2 JASPAR yes 26185853
chr1 1093835 1093851 RFX3 JASPAR yes 26185854
chr1 1093835 1093851 RFX4 JASPAR yes 26185855
chr1 1093835 1093851 RFX5 JASPAR yes 26185856
chr1 1093835 1093851 RFX2 JASPAR yes 118214108
chr1 1093835 1093851 RFX3 JASPAR yes 118214109
chr1 1093835 1093851 RFX4 JASPAR yes 118214110
chr1 1093835 1093851 RFX5 JASPAR yes 118214111
chr1 1093883 1093889 NFIC JASPAR yes 26185857
chr1 1093883 1093889 NFIC JASPAR yes 118214112
chr1 1093901 1093911 RELA JASPAR yes 26185858
chr1 1093901 1093911 REL JASPAR yes 26185859
chr1 1093901 1093911 RELA JASPAR yes 118214113
chr1 1093901 1093911 REL JASPAR yes 118214114
chr1 1093934 1093939 SP1 TRANSFAC yes 26185860
chr1 1093934 1093939 SP1 TRANSFAC yes 118214115
chr1 1093934 1093941 SP1 TRANSFAC yes 26185861
chr1 1093934 1093941 SP1 TRANSFAC yes 118214116
chr1 1093935 1093949 MTF1 JASPAR yes 26185862
chr1 1093935 1093949 MTF1 JASPAR yes 118214117
SNP sites on vista22[chr1:1093610-1093958]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 1093784 rs115569263 G A
POLR2A
3792
chr1 1093836 rs116816284 G A
POLR2A RFX2 RFX3 RFX4 RFX5
3793
chr1 1093855 rs75873837 T C
POLR2A
3794
chr1 1093877 rs139856491 G A
POLR2A
3795
chr1 1093933 rs61529012 GC G
POLR2A
3796
chr1 1093942 rs531907471 G A
MTF1 POLR2A
3797
Genes possibly regulated by vista22[chr1:1093610-1093958]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 1006346 1009687 - RNF223 ENSG00000237330.2 1009687 0.97 1.0 14 16077
chr1 1017198 1051741 - C1orf159 ENSG00000131591.13 1051741 0.65 1.0 15 58131
chr1 1109264 1133315 + TTLL10 ENSG00000162571.9 1109264 0.93 1.0 16 84694
chr1 1138888 1142071 - TNFRSF18 ENSG00000186891.9 1142071 0.88 1.0 17 51887
chr1 1146706 1149518 - TNFRSF4 ENSG00000186827.6 1149518 0.86 1.0 18 44440
chr1 1152288 1167411 - SDF4 ENSG00000078808.12 1167411 0.56 1.0 19 26547
chr1 1167629 1170421 + B3GALT6 ENSG00000176022.3 1167629 0.6 0.99 20 26329
chr1 1177826 1182102 - FAM132A ENSG00000184163.3 1182102 0.9 0.99 21 11856
Expression level of Genes
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miRNAs possibly regulated by vista22[chr1:1093610-1093958]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results